{
    "type": "genome",
    "identifier": "GCF_008244685.1",
    "organism": "Luteimonas viscosa",
    "title": "Luteimonas viscosa",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Beijing Institute of Technology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_008244685.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN12647465",
        "wgs_master": "VTFT00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1132694",
        "species_taxid": "1132694",
        "organism_name": "Luteimonas viscosa",
        "infraspecific_name": "strain=XBU10",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/09/02",
        "asm_name": "ASM824468v1",
        "asm_submitter": "Beijing Institute of Technology",
        "gbrs_paired_asm": "GCA_008244685.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/244/685/GCF_008244685.1_ASM824468v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4169055",
        "genome_size_ungapped": "4168970",
        "gc_percent": "70.000000",
        "replicon_count": "0",
        "scaffold_count": "9",
        "contig_count": "9",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_008244685.1-RS_2024_05_06",
        "annotation_date": "2024-05-06",
        "total_gene_count": "3706",
        "protein_coding_gene_count": "3606",
        "non_coding_gene_count": "55",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-09-02",
    "dateModified": "2019-09-02",
    "datePublished": "2019-09-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Luteimonas viscosa"
        ],
        "sample_taxid": [
            "1132694"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Inner Mongolia Autonomous Region"
        ],
        "sample_host_location_id": [],
        "data_size": "1.116 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4169055",
        "Number of Sequences": "9",
        "Longest Sequences (bp)": "3315587",
        "N50 (bp)": "3315587",
        "Gap Ratio (%)": "0.002063",
        "GCcontent (%)": "69.9",
        "Number of CDSs": "3705",
        "Average Protein Length": "333.1",
        "Coding Ratio (%)": "88.8",
        "Number of rRNAs": "3",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Luteimonas viscosa",
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                "validated": true,
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            {
                "organism_name": "Luteimonas saliphila",
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                "species_taxid": 2804919,
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                "status": "below_threshold"
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            {
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                "species_taxid": 488485,
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                "status": "below_threshold"
            },
            {
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                "species_taxid": 2599615,
                "relation_to_type": "type",
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                "ani": 85.0249,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Luteimonas aestuarii",
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                "accession": "GCA_004357985.1",
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                "species_taxid": 453837,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Luteimonas arsenica",
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                "accession": "GCA_004352825.1",
                "taxid": 1586242,
                "species_taxid": 1586242,
                "relation_to_type": "type",
                "validated": true,
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            },
            {
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                "taxid": 1714359,
                "species_taxid": 1714359,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "organism_name": "Luteimonas colneyensis",
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                "species_taxid": 2762230,
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            },
            {
                "organism_name": "Luteimonas aquatica",
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                "accession": "GCA_022662575.1",
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                "species_taxid": 450364,
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                "ani": 82.0367,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Luteimonas weifangensis",
                "strain": "strain=WF-2",
                "accession": "GCA_003416885.1",
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                "species_taxid": 2303539,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thermomonas aquatica",
                "strain": "strain=SY21",
                "accession": "GCA_006337105.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thermomonas haemolytica",
                "strain": "strain=LMG 19653",
                "accession": "GCA_006352395.1",
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                "relation_to_type": "type",
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                "ani": 81.2307,
                "matched_fragments": 540,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thermomonas haemolytica",
                "strain": "strain=DSM 13605",
                "accession": "GCA_004346265.1",
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                "relation_to_type": "type",
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            }
        ],
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            "contamination": 0.0,
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        "gtdb_result": [
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                "accession": "GCF_008244685.1",
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                "mean_intra_species_ani": "N/A",
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    "_bac2feature": {
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}