{ "tc_result": [ { "organism_name": "Halomonas cupida", "strain": "strain=DSM 4740", "accession": "GCA_900142755.1", "taxid": 44933, "species_taxid": 44933, "relation_to_type": "type", "validated": true, "ani": 79.7856, "matched_fragments": 646, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas cupida", "strain": "strain=NBRC 102219", "accession": "GCA_007991155.1", "taxid": 44933, "species_taxid": 44933, "relation_to_type": "type", "validated": true, "ani": 79.7383, "matched_fragments": 622, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas litopenaei", "strain": "strain=SYSU ZJ2214", "accession": "GCA_003045775.1", "taxid": 2109328, "species_taxid": 2109328, "relation_to_type": "type", "validated": true, "ani": 79.1093, "matched_fragments": 525, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas huangheensis", "strain": "strain=BJGMM-B45", "accession": "GCA_001431725.1", "taxid": 1178482, "species_taxid": 1178482, "relation_to_type": "type", "validated": true, "ani": 79.0924, "matched_fragments": 603, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas huangheensis", "strain": "strain=BJGMM-B45", "accession": "GCA_000470745.1", "taxid": 1178482, "species_taxid": 1178482, "relation_to_type": "type", "validated": true, "ani": 79.0629, "matched_fragments": 605, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas halophila", "strain": "strain=NBRC 102604", "accession": "GCA_007989465.1", "taxid": 29573, "species_taxid": 29573, "relation_to_type": "type", "validated": true, "ani": 78.7043, "matched_fragments": 375, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas smyrnensis", "strain": "strain=AAD6", "accession": "GCA_000265245.2", "taxid": 720605, "species_taxid": 720605, "relation_to_type": "type", "validated": true, "ani": 78.6117, "matched_fragments": 386, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas borealis", "strain": "strain=ATF 5.2", "accession": "GCA_004798905.1", "taxid": 2508710, "species_taxid": 2508710, "relation_to_type": "type", "validated": true, "ani": 78.4999, "matched_fragments": 356, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas tianxiuensis", "strain": "strain=BC-M4-5", "accession": "GCA_009834345.1", "taxid": 2497861, "species_taxid": 2497861, "relation_to_type": "type", "validated": true, "ani": 78.4863, "matched_fragments": 369, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidivorans", "strain": "strain=MCCC 1A13718", "accession": "GCA_017868935.1", "taxid": 2733488, "species_taxid": 2733488, "relation_to_type": "type", "validated": true, "ani": 78.4777, "matched_fragments": 359, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas stenophila", "strain": "strain=CECT 7744", "accession": "GCA_014192275.1", "taxid": 795312, "species_taxid": 795312, "relation_to_type": "type", "validated": true, "ani": 78.4218, "matched_fragments": 431, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas nitroreducens", "strain": "strain=11S", "accession": "GCA_003966155.1", "taxid": 447425, "species_taxid": 447425, "relation_to_type": "type", "validated": true, "ani": 78.3532, "matched_fragments": 411, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas campaniensis", "strain": "strain=5AG", "accession": "GCA_014193375.1", "taxid": 213554, "species_taxid": 213554, "relation_to_type": "type", "validated": true, "ani": 78.3125, "matched_fragments": 361, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas ethanolica", "strain": "strain=MCCC 1A11081", "accession": "GCA_021404305.1", "taxid": 2733486, "species_taxid": 2733486, "relation_to_type": "type", "validated": true, "ani": 78.2618, "matched_fragments": 342, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidoxydans", "strain": "strain=MCCC 1A11059", "accession": "GCA_017868775.1", "taxid": 2733484, "species_taxid": 2733484, "relation_to_type": "type", "validated": true, "ani": 78.2595, "matched_fragments": 359, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas bachuensis", "strain": "strain=DX6", "accession": "GCA_011742165.1", "taxid": 2717286, "species_taxid": 2717286, "relation_to_type": "type", "validated": true, "ani": 78.2, "matched_fragments": 348, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas alimentaria", "strain": "strain=DSM 15356", "accession": "GCA_009902005.1", "taxid": 147248, "species_taxid": 147248, "relation_to_type": "type", "validated": true, "ani": 78.1699, "matched_fragments": 325, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas antri", "strain": "strain=Y3S6", "accession": "GCA_019430905.1", "taxid": 2846777, "species_taxid": 2846777, "relation_to_type": "type", "validated": true, "ani": 78.1659, "matched_fragments": 376, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas heilongjiangensis", "strain": "strain=9-2", "accession": "GCA_003202165.1", "taxid": 1387883, "species_taxid": 1387883, "relation_to_type": "type", "validated": true, "ani": 78.0835, "matched_fragments": 430, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas cerina", "strain": "strain=CECT 7282", "accession": "GCA_014192215.1", "taxid": 447424, "species_taxid": 447424, "relation_to_type": "type", "validated": true, "ani": 78.0462, "matched_fragments": 380, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas montanilacus", "strain": "strain=PYC7W", "accession": "GCA_003336675.1", "taxid": 2282305, "species_taxid": 2282305, "relation_to_type": "type", "validated": true, "ani": 78.0198, "matched_fragments": 335, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas aerodenitrificans", "strain": "strain=MCCC 1A11058", "accession": "GCA_021404405.1", "taxid": 2733483, "species_taxid": 2733483, "relation_to_type": "type", "validated": true, "ani": 77.9219, "matched_fragments": 376, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas taeanensis", "strain": "strain=BH539", "accession": "GCA_900100755.1", "taxid": 284577, "species_taxid": 284577, "relation_to_type": "type", "validated": true, "ani": 77.9127, "matched_fragments": 319, "total_fragments": 1631, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_008329985.2", "gtdb_species": "s__Halomonas sp008329985", "ani": 100.0, "matched_fragments": 1631, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_900142755.1", "gtdb_species": "s__Halomonas cupida", "ani": 79.777, "matched_fragments": 647, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003045775.1", "gtdb_species": "s__Halomonas litopenaei", "ani": 79.0915, "matched_fragments": 527, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.31", "min_intra_species_ani": "97.80", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.89", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_001431725.1", "gtdb_species": "s__Halomonas huangheensis", "ani": 79.0424, "matched_fragments": 604, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002549795.1", "gtdb_species": "s__Halomonas beimenensis", "ani": 78.7526, "matched_fragments": 391, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017303055.1", "gtdb_species": "s__Halomonas litopenaei_A", "ani": 78.7445, "matched_fragments": 508, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007989465.1", "gtdb_species": "s__Halomonas halophila", "ani": 78.7108, "matched_fragments": 373, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.43", "min_intra_species_ani": "97.59", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000265245.1", "gtdb_species": "s__Halomonas smyrnensis", "ani": 78.6012, "matched_fragments": 387, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.45", "min_intra_species_ani": "98.45", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004798905.1", "gtdb_species": "s__Halomonas borealis", "ani": 78.4999, "matched_fragments": 356, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017868935.1", "gtdb_species": "s__Halomonas sp017868935", "ani": 78.4331, "matched_fragments": 355, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014192275.1", "gtdb_species": "s__Halomonas stenophila", "ani": 78.431, "matched_fragments": 430, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003966155.1", "gtdb_species": "s__Halomonas nitroreducens", "ani": 78.3725, "matched_fragments": 409, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014193375.1", "gtdb_species": "s__Halomonas campaniensis", "ani": 78.3119, "matched_fragments": 361, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004361885.1", "gtdb_species": "s__Halomonas ventosae_C", "ani": 78.2196, "matched_fragments": 296, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011742165.1", "gtdb_species": "s__Halomonas bachuensis", "ani": 78.1965, "matched_fragments": 349, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018401555.1", "gtdb_species": "s__Halomonas sp018401555", "ani": 78.1738, "matched_fragments": 312, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009902005.1", "gtdb_species": "s__Halomonas alimentaria", "ani": 78.1464, "matched_fragments": 327, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014779595.1", "gtdb_species": "s__Halomonas_B sp014779595", "ani": 78.0579, "matched_fragments": 333, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000246875.1", "gtdb_species": "s__Halomonas sp000246875", "ani": 78.0565, "matched_fragments": 347, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014192215.1", "gtdb_species": "s__Halomonas cerina", "ani": 78.0368, "matched_fragments": 381, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011742915.1", "gtdb_species": "s__Halomonas desiderata", "ani": 78.0208, "matched_fragments": 377, "total_fragments": 1631, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.30", "min_intra_species_ani": "98.24", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" } ] }