{ "type": "genome", "identifier": "GCF_008630635.1", "organism": "Neptunomonas concharum", "title": "Neptunomonas concharum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing University of Chemical Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_008630635.1", "bioproject": "PRJNA224116", "biosample": "SAMN12684172", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1031538", "species_taxid": "1031538", "organism_name": "Neptunomonas concharum", "infraspecific_name": "strain=JCM17730", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/09/21", "asm_name": "ASM863063v1", "asm_submitter": "Beijing University of Chemical Technology", "gbrs_paired_asm": "GCA_008630635.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/630/635/GCF_008630635.1_ASM863063v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3561992", "genome_size_ungapped": "3561992", "gc_percent": "46.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_008630635.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "3387", "protein_coding_gene_count": "3291", "non_coding_gene_count": "88", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-09-21", "dateModified": "2019-09-21", "datePublished": "2019-09-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Neptunomonas concharum" ], "sample_taxid": [ "1031538" ], "sample_host_organism": [], 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95, "status": "below_threshold" }, { "organism_name": "Nitrincola tapanii", "strain": "strain=MEB193", "accession": "GCA_008368715.1", "taxid": 1708751, "species_taxid": 1708751, "relation_to_type": "type", "validated": true, "ani": 77.4855, "matched_fragments": 64, "total_fragments": 1187, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amphritea opalescens", "strain": "strain=ANRC-JH13", "accession": "GCA_003957515.1", "taxid": 2490544, "species_taxid": 2490544, "relation_to_type": "type", "validated": true, "ani": 77.3536, "matched_fragments": 94, "total_fragments": 1187, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amphritea atlantica", "strain": "strain=DSM 18887", "accession": "GCA_900111095.1", "taxid": 355243, "species_taxid": 355243, "relation_to_type": "type", "validated": true, "ani": 77.3354, "matched_fragments": 82, "total_fragments": 1187, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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