{ "type": "genome", "identifier": "GCF_008635795.1", "organism": "Paenibacillus tepidiphilus", "title": "Paenibacillus tepidiphilus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Sun Yat-Sen University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_008635795.1", "bioproject": "PRJNA224116", "biosample": "SAMN12714330", "wgs_master": "VWRQ00000000.1", "refseq_category": "reference genome", "taxid": "2608683", "species_taxid": "2608683", "organism_name": "Paenibacillus tepidiphilus", "infraspecific_name": "strain=SYSU G01001", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/09/23", "asm_name": "ASM863579v1", "asm_submitter": "Sun Yat-Sen University", "gbrs_paired_asm": "GCA_008635795.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/635/795/GCF_008635795.1_ASM863579v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6809498", "genome_size_ungapped": "6809498", "gc_percent": "54.000000", "replicon_count": "0", "scaffold_count": "90", "contig_count": "90", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_008635795.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "5899", "protein_coding_gene_count": "5749", "non_coding_gene_count": "116", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-09-23", "dateModified": "2019-09-23", "datePublished": "2019-09-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Paenibacillus tepidiphilus" ], "sample_taxid": [ "2608683" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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2226, "total_fragments": 2229, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Paenibacillus tengchongensis", "strain": "strain=SYSU G01003", "accession": "GCA_008973665.1", "taxid": 2608684, "species_taxid": 2608684, "relation_to_type": "type", "validated": true, "ani": 86.1897, "matched_fragments": 1692, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus typhae", "strain": "strain=CGMCC 1.11012", "accession": "GCA_900099765.1", "taxid": 1174501, "species_taxid": 1174501, "relation_to_type": "type", "validated": true, "ani": 80.04, "matched_fragments": 988, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus tianjinensis", "strain": "strain=TB2019", "accession": "GCA_017086365.1", "taxid": 2810347, "species_taxid": 2810347, "relation_to_type": "type", "validated": true, "ani": 79.911, "matched_fragments": 855, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus sonchi", "strain": "strain=LMG 24727", "accession": "GCA_016772475.1", "taxid": 373687, "species_taxid": 373687, "relation_to_type": "type", "validated": true, "ani": 79.7129, "matched_fragments": 844, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus riograndensis", "strain": "", "accession": "GCA_000981585.1", "taxid": 483937, "species_taxid": 483937, "relation_to_type": "type", "validated": true, "ani": 79.6768, "matched_fragments": 866, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus borealis", "strain": "strain=DSM 13188", "accession": "GCA_000758665.1", "taxid": 160799, "species_taxid": 160799, "relation_to_type": "type", "validated": true, "ani": 79.6758, "matched_fragments": 986, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus riograndensis", "strain": "strain=SBR5", "accession": "GCA_000224945.2", "taxid": 483937, "species_taxid": 483937, "relation_to_type": "type", "validated": true, "ani": 79.6473, "matched_fragments": 643, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus phytohabitans", "strain": "strain=LMG 31459", "accession": "GCA_013141775.1", "taxid": 2654978, "species_taxid": 2654978, "relation_to_type": "type", "validated": true, "ani": 79.5488, "matched_fragments": 977, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus tritici", "strain": "strain=LMG 29502", "accession": "GCA_013204885.1", "taxid": 1873425, "species_taxid": 1873425, "relation_to_type": "type", "validated": true, "ani": 79.5098, "matched_fragments": 858, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus silagei", "strain": "strain=DSM 101953", "accession": "GCA_017874735.1", "taxid": 1670801, "species_taxid": 1670801, "relation_to_type": "type", "validated": true, "ani": 79.3365, "matched_fragments": 880, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus piscarius", "strain": "strain=P121", "accession": "GCA_022234545.1", "taxid": 1089681, "species_taxid": 1089681, "relation_to_type": "type", "validated": true, "ani": 79.3256, "matched_fragments": 917, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus agri", "strain": "strain=JW14", "accession": "GCA_013359945.1", "taxid": 2744309, "species_taxid": 2744309, "relation_to_type": "type", "validated": true, "ani": 78.7976, "matched_fragments": 514, "total_fragments": 2229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus rhizophilus", "strain": "strain=7197", "accession": "GCA_003854965.1", 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"vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Paenibacillus", "tepidiphilus" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }