# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence01:331..636(-)	partial			WP_000144622.1	M42 family metallopeptidase	66.3	18.0	98.5
MGA_32	LOCUS_00310	sequence01:36876..37136(-)	partial			WP_000804298.1	PhzF family isomerase	100.0	29.0	94.2
MGA_60	LOCUS_00580	sequence01:72782..73057(+)	partial			WP_011817109.1	DUF29 domain-containing protein	87.9	55.9	63.8
MGA_180	LOCUS_01780	sequence01:199482..199925(+)	partial			WP_001081018.1	C40 family peptidase	100.0	51.8	97.3
MGA_188	LOCUS_01860	sequence01:208673..209158(-)	partial			WP_001291715.1	SPI-2 type III secretion system apparatus protein SsaU	100.0	45.7	96.9
MGA_199	LOCUS_01970	sequence01:218565..218837(-)	partial			WP_001765123.1	type III secretion system domain-containing protein	100.0	49.5	87.8
MGA_228	LOCUS_02260	sequence01:243813..243974(+)	partial			WP_000756081.1	APC family permease	100.0	11.9	90.6
MGA_273	LOCUS_02710	sequence01:293644..294018(-)	partial			WP_000457648.1	Y-family DNA polymerase	100.0	29.4	91.9
MGA_274	LOCUS_02720	sequence01:294015..294521(-)	partial			WP_000394197.1	translesion error-prone DNA polymerase V autoproteolytic subunit	38.1	46.0	82.8
MGA_277	LOCUS_02750	sequence01:297168..297419(+)	frameshift		297160	WP_149366349.1	hypothetical protein	98.8	73.8	56.0
MGA_361	LOCUS_03590	sequence01:376021..376296(+)	partial			WP_001537478.1	RICIN domain-containing protein	97.8	51.4	93.3
MGA_381	LOCUS_03780	sequence01:398792..399106(+)	frameshift		399064	WP_185669181.1	class I SAM-dependent methyltransferase	75.0	14.3	40.0
MGA_382	LOCUS_03790	sequence01:399156..399371(+)	frameshift		399052	WP_011011068.1	DUF4942 domain-containing protein	98.6	12.3	51.4
MGA_414	LOCUS_04110	sequence01:432710..433276(-)	partial			WP_001257320.1	thiamine kinase	100.0	68.6	96.3
MGA_433	LOCUS_04300	sequence02:10360..14232(-)	partial			WP_000076972.1	DNA translocase FtsK	56.2	53.5	82.1
MGA_462	LOCUS_04590	sequence02:47494..47733(+)	frameshift		47428	WP_000169527.1	transposase	82.3	65.7	81.5
MGA_463	LOCUS_04600	sequence02:47866..48033(-)	partial			WP_010723102.1	Rz1-like lipoprotein, Qin prophage	83.6	64.3	53.7
MGA_464	LOCUS_04610	sequence02:48020..48256(-)	internal_stop_codon	48020..48022(-)		WP_001050879.1	DUF2514 domain-containing protein	100.0	43.6	89.7
MGA_469	LOCUS_04660	sequence02:52037..52276(+)	frameshift		52273	WP_089600859.1	IS3 family transposase	100.0	20.7	89.9
MGA_470	LOCUS_04670	sequence02:52695..52904(+)	frameshift,internal_stop_codon	53061..53063(+)	52850,52958	WP_000063648.1	site-specific integrase	62.3	10.0	72.1
MGA_471	LOCUS_04680	sequence02:53071..53433(+)	frameshift,internal_stop_codon	53061..53063(+),53433..53435(+)	53627,52853,52958	WP_120816036.1	site-specific integrase	100.0	27.8	51.7
MGA_472	LOCUS_04690	sequence02:53449..53643(+)	frameshift,internal_stop_codon	53431..53433(+)	53776,53625	WP_014070847.1	site-specific integrase	93.8	14.0	66.7
MGA_473	LOCUS_04700	sequence02:53818..54015(+)	frameshift		53776,53625	WP_120816036.1	site-specific integrase	98.5	14.8	73.4
MGA_504	LOCUS_05010	sequence02:82024..82200(-)	frameshift		82398,82271	WP_001252735.1	PQQ-dependent sugar dehydrogenase	87.9	13.7	90.2
MGA_505	LOCUS_05020	sequence02:82218..82415(-)	frameshift		82398,82271	WP_001252735.1	PQQ-dependent sugar dehydrogenase	72.3	12.6	87.2
MGA_506	LOCUS_05030	sequence02:82378..82725(-)	partial			WP_002228052.1	IS1-like element transposase	59.1	74.7	77.9
MGA_507	LOCUS_05040	sequence02:83069..83494(+)	partial			WP_110951902.1	GntP family permease	78.7	24.0	71.2
MGA_511	LOCUS_05080	sequence02:87949..88212(-)	partial			WP_014877268.1	MaoC family dehydratase N-terminal domain-containing protein	83.9	25.4	47.9
MGA_514	LOCUS_05110	sequence02:89975..90490(-)	partial			WP_013525151.1	CoA ester lyase	66.1	41.5	40.7
MGA_568	LOCUS_05650	sequence02:150005..150445(-)	frameshift		150010	WP_001115839.1	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	82.2	15.4	37.2
MGA_611	LOCUS_06080	sequence02:199518..200738(-)	partial			WP_000030559.1	cell envelope integrity protein TolA	33.7	36.4	95.6
MGA_624	LOCUS_06210	sequence02:216163..216510(-)	partial			WP_000254356.1	succinate dehydrogenase membrane anchor subunit	74.8	74.8	100.0
MGA_626	LOCUS_06230	sequence02:217302..217547(-)	frameshift,internal_stop_codon	217559..217561(-)	217588	WP_001333072.1	hypothetical protein	45.7	60.7	70.3
MGA_630	LOCUS_06270	sequence02:221248..223098(-)	partial			WP_002852392.1	HAD-IA family hydrolase	45.0	26.7	31.5
MGA_632	LOCUS_06290	sequence02:224236..226014(-)	partial			WP_011068688.1	glycosyltransferase	65.4	64.9	25.4
MGA_638	LOCUS_06350	sequence02:231195..231527(-)	partial			WP_001194239.1	hypothetical protein	99.1	44.3	85.3
MGA_774	LOCUS_07710	sequence02:389488..390069(-)	partial			WP_000939580.1	flippase	98.4	43.0	37.9
MGA_775	LOCUS_07720	sequence02:391114..392028(+)	frameshift		392007	WP_164930460.1	glycosyltransferase	86.5	10.9	28.7
MGA_913	LOCUS_09080	sequence03:145944..149066(+)	partial			WP_013095755.1	DUF927 domain-containing protein	32.9	33.1	32.0
MGA_942	LOCUS_09370	sequence03:182228..182401(-)	partial			WP_000511773.1	integrase domain-containing protein	100.0	19.5	87.7
MGA_946	LOCUS_09410	sequence03:190178..191629(+)	partial			WP_014966181.1	rhs element protein RhsC	27.5	9.5	71.4
MGA_948	LOCUS_09430	sequence03:192099..192587(+)	internal_stop_codon	191991..191993(+)		WP_014966189.1	RHS element core protein	94.4	11.0	56.5
MGA_950	LOCUS_09450	sequence03:193136..194260(+)	internal_stop_codon	193038..193040(+),193011..193013(+)		WP_000015298.1	rhs element protein RhsB	66.0	17.4	63.1
MGA_951	LOCUS_09460	sequence03:194371..194643(+)	frameshift,internal_stop_codon	194641..194643(+)	194772,194791	WP_000749215.1	tetratricopeptide repeat protein	73.3	14.1	43.5
MGA_952	LOCUS_09470	sequence03:194689..195189(+)	internal_stop_codon	194641..194643(+)		WP_010946906.1	Dot/Icm type IV secretion system effector LidL	76.5	25.3	40.2
MGA_954	LOCUS_09490	sequence03:196331..196504(-)	frameshift		196514	WP_047373140.1	GNAT family N-acetyltransferase	89.5	31.3	84.3
MGA_956	LOCUS_09510	sequence03:197162..197626(-)	internal_stop_codon	197669..197671(-)		WP_001109834.1	LysR family transcriptional regulator	100.0	50.0	96.1
MGA_957	LOCUS_09520	sequence03:197669..198088(-)	internal_stop_codon	197669..197671(-)		WP_001109834.1	LysR family transcriptional regulator	100.0	45.1	99.3
MGA_961	LOCUS_09560	sequence03:201480..202463(-)	partial			WP_000983126.1	cell division protein ZipA	52.0	51.8	92.4
MGA_1001	LOCUS_09960	sequence03:237782..238027(-)	partial			WP_000395849.1	arylsulfatase AslA	88.9	13.1	68.1
MGA_1042	LOCUS_10370	sequence03:288108..288665(+)	partial			WP_146623251.1	beta-glucoside-specific PTS transporter subunit IIABC	72.4	21.2	40.0
MGA_1165	LOCUS_11600	sequence04:41622..42026(-)	frameshift		42146,42046	WP_000929458.1	DNA-binding transcriptional regulator CdaR	97.0	33.8	77.7
MGA_1188	LOCUS_11830	sequence04:69268..69603(-)	partial			WP_000339945.1	recombination-promoting nuclease RpnC	98.2	37.0	40.5
MGA_1198	LOCUS_11930	sequence04:79541..79927(+)	partial			WP_000556561.1	YacC family pilotin-like protein	100.0	74.4	86.7
MGA_1214	LOCUS_12090	sequence04:100539..100733(-)	internal_stop_codon	100539..100541(-)		WP_000502511.1	type VI secretion system tube protein TssD	98.4	10.6	82.5
MGA_1215	LOCUS_12100	sequence04:100819..101061(-)	internal_stop_codon	100539..100541(-)		WP_000502511.1	type VI secretion system tube protein TssD	92.5	12.5	89.2
MGA_1229	LOCUS_12240	sequence04:114602..115342(-)	internal_stop_codon	114602..114604(-)		WP_001802116.1	LysR family transcriptional regulator	100.0	78.6	95.9
MGA_1297	LOCUS_12920	sequence04:196445..198058(-)	partial			WP_011727566.1	sulfatase-like hydrolase/transferase	64.2	59.0	26.7
MGA_1325	LOCUS_13200	sequence04:232210..232581(-)	partial			WP_000291399.1	DsbA family protein	44.7	19.6	63.6
MGA_1326	LOCUS_13210	sequence04:232654..232881(-)	internal_stop_codon	232930..232932(-)		WP_000743355.1	fimbrial protein BcfA	90.7	37.8	80.9
MGA_1328	LOCUS_13230	sequence04:234490..234939(-)	partial			WP_015704341.1	chitinase	84.6	14.7	52.0
MGA_1371	LOCUS_13660	sequence04:284060..284647(+)	partial			WP_001064935.1	YjjW family glycine radical enzyme activase	100.0	67.9	96.4
MGA_1438	LOCUS_14330	sequence04:358967..359941(+)	partial			WP_000979786.1	class I SAM-dependent methyltransferase	87.3	52.1	86.6
MGA_1485	LOCUS_14790	sequence05:42976..43395(-)	frameshift		43415	WP_000866395.1	IS3 family transposase	95.0	46.6	63.6
MGA_1486	LOCUS_14800	sequence05:43392..43760(-)	frameshift		43789,43414	WP_000866395.1	IS3 family transposase	97.5	42.4	60.0
MGA_1571	LOCUS_15650	sequence05:135283..135855(+)	partial			WP_010989268.1	protein bax	100.0	69.3	97.9
MGA_1622	LOCUS_16160	sequence05:200752..202023(+)	partial			WP_011030909.1	glycoside hydrolase family 92 protein	92.4	17.2	29.8
MGA_1665	LOCUS_16590	sequence05:247478..248638(-)	partial			WP_000065933.1	Hcp1 family type VI secretion system effector	65.8	64.5	71.7
MGA_1686	LOCUS_16800	sequence05:279635..280087(-)	partial			WP_000958739.1	DNA utilization protein GntX	100.0	66.1	88.7
MGA_1689	LOCUS_16830	sequence05:281172..281360(-)	frameshift		281207	WP_000235943.1	Rpn family recombination-promoting nuclease/putative transposase	82.3	16.6	78.4
MGA_1719	LOCUS_17130	sequence05:312583..318609(-)	partial			WP_014640143.1	autotransporter outer membrane protein	86.4	68.1	43.5
MGA_1802	LOCUS_17960	sequence06:16354..16608(-)	partial			WP_000433046.1	RNA helicase	100.0	49.1	98.8
MGA_1819	LOCUS_18130	sequence06:35049..37034(+)	partial			WP_084105269.1	PAAR domain-containing protein	73.5	79.7	31.9
MGA_1853	LOCUS_18470	sequence06:70007..70243(+)	frameshift		70192	WP_005051918.1	L(+)-tartrate dehydratase subunit alpha	85.9	24.9	83.6
MGA_1854	LOCUS_18480	sequence06:70231..70911(+)	frameshift		70192	WP_000986806.1	L(+)-tartrate dehydratase subunit alpha	100.0	74.6	96.5
MGA_1889	LOCUS_18830	sequence06:107738..107902(+)	partial			WP_000039324.1	hypothetical protein	74.1	74.1	95.0
MGA_1968	LOCUS_19620	sequence06:192609..192764(+)	frameshift,internal_stop_codon	192781..192783(+)	192762,192567	WP_000184299.1	PDDEXK nuclease domain-containing protein	98.0	13.6	88.0
MGA_1992	LOCUS_19860	sequence06:214567..214770(-)	frameshift,internal_stop_codon	214809..214811(-)	214817	WP_001116614.1	p-hydroxybenzoic acid efflux pump operon protein AaeX	100.0	74.4	100.0
MGA_2029	LOCUS_20230	sequence07:8366..8710(-)	partial			WP_000896735.1	gluconokinase	90.4	55.1	80.6
MGA_2030	LOCUS_20240	sequence07:8775..9539(+)	frameshift		9524,9749	WP_001244064.1	LacI family DNA-binding transcriptional regulator	77.2	59.0	96.9
MGA_2038	LOCUS_20320	sequence07:19088..19246(+)	frameshift,internal_stop_codon	19257..19259(+),19413..19415(+)	19234	WP_001059402.1	GNAT family N-acetyltransferase	88.5	27.5	76.1
MGA_2039	LOCUS_20330	sequence07:19260..19415(+)	frameshift,internal_stop_codon	19257..19259(+),19413..19415(+)	19234	WP_001519079.1	GNAT family N-acetyltransferase	96.1	29.3	87.8
MGA_2043	LOCUS_20370	sequence07:22051..22242(-)	internal_stop_codon	22255..22257(-)		WP_000218459.1	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	100.0	23.3	93.7
MGA_2044	LOCUS_20380	sequence07:22255..22815(-)	frameshift,internal_stop_codon	22254..22256(-)	22829	WP_000218459.1	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	100.0	68.9	95.7
MGA_2078	LOCUS_20720	sequence07:57064..61272(-)	partial			WP_013098386.1	Ig-like domain-containing protein	76.8	32.0	28.3
MGA_2085	LOCUS_20790	sequence07:68525..69637(-)	partial			WP_013095343.1	methyl-accepting chemotaxis protein	87.0	61.6	79.2
MGA_2187	LOCUS_21800	sequence07:173622..173999(+)	frameshift		173957	WP_102800924.1	IS3 family transposase	92.8	31.7	84.5
MGA_2188	LOCUS_21810	sequence07:174002..174232(+)	frameshift		173957	WP_102800924.1	IS3 family transposase	100.0	20.8	89.5
MGA_2217	LOCUS_22100	sequence07:208566..209033(+)	frameshift		209171,208805,208919	WP_000457029.1	lipid A hydroxylase LpxO	51.6	26.5	86.2
MGA_2218	LOCUS_22110	sequence07:208987..209223(+)	frameshift		209171,208805,208919	WP_000457029.1	lipid A hydroxylase LpxO	76.9	19.9	96.7
MGA_2219	LOCUS_22120	sequence07:209231..209473(+)	frameshift		209169	WP_000457029.1	lipid A hydroxylase LpxO	98.8	26.2	88.6
MGA_2231	LOCUS_22230	sequence07:222281..222769(-)	frameshift,internal_stop_codon	222762..222764(-),222759..222761(-)	222752	WP_000551709.1	heme lyase NrfEFG subunit NrfEF	88.9	20.3	65.3
MGA_2232	LOCUS_22240	sequence07:222762..224498(-)	frameshift,internal_stop_codon	222762..222764(-),222759..222761(-)	222752	WP_000551709.1	heme lyase NrfEFG subunit NrfEF	99.5	77.7	80.7
MGA_2251	LOCUS_22430	sequence07:245040..>246214(-)	partial			WP_013098386.1	Ig-like domain-containing protein	39.2	4.3	36.9
MGA_2253	LOCUS_22450	sequence08:1711..1872(-)	internal_stop_codon	1918..1920(-)		WP_000189676.1	cobyric acid synthase	100.0	10.1	81.1
MGA_2254	LOCUS_22460	sequence08:1918..2259(-)	internal_stop_codon	1918..1920(-)		WP_000189676.1	cobyric acid synthase	100.0	22.3	92.9
MGA_2255	LOCUS_22470	sequence08:2584..2880(+)	partial			WP_001201312.1	L-threonine kinase PduX	94.9	31.0	88.2
MGA_2288	LOCUS_22800	sequence08:37059..38222(-)	partial			WP_000103600.1	DUF1229 domain-containing protein	74.7	71.7	26.5
MGA_2393	LOCUS_23850	sequence08:161855..162427(+)	frameshift,internal_stop_codon	161815..161817(+)	161688,161736	WP_014344509.1	elongation factor P-like protein YeiP	100.0	71.2	100.0
MGA_2416	LOCUS_24080	sequence08:189406..190269(+)	partial			WP_001681975.1	hypothetical protein	65.2	39.8	47.8
MGA_2419	LOCUS_24110	sequence08:191864..193216(-)	partial			WP_001681975.1	hypothetical protein	78.4	72.2	77.0
MGA_2440	LOCUS_24320	sequence08:209969..210154(-)	partial			WP_001135200.1	HNH endonuclease signature motif containing protein	98.4	51.7	96.7
MGA_2461	LOCUS_24530	sequence08:225141..225656(+)	partial			WP_000065105.1	ead/Ea22-like family protein	60.8	60.9	51.4
MGA_2463	LOCUS_24550	sequence08:225851..226162(+)	partial			WP_000208034.1	DUF551 domain-containing protein	44.7	19.4	76.1
MGA_2465	LOCUS_24570	sequence08:226733..227095(+)	partial			WP_000206752.1	DUF551 domain-containing protein	63.3	38.2	41.2
MGA_2466	LOCUS_24580	sequence08:227092..227244(+)	partial			WP_000048387.1	exonuclease	98.0	6.7	58.2
MGA_2467	LOCUS_24590	sequence09:104..745(-)	partial			WP_000540864.1	site-specific integrase	95.3	50.9	35.2
MGA_2510	LOCUS_25020	sequence09:44631..45305(-)	partial			WP_002211601.1	DUF4225 domain-containing protein	66.1	51.4	24.8
MGA_2518	LOCUS_25100	sequence09:56522..56671(-)	partial			WP_000706477.1	glycerate kinase	100.0	12.9	85.7
MGA_2577	LOCUS_25690	sequence09:126177..126464(+)	partial			WP_010989022.1	GyrI-like domain-containing protein	91.6	30.5	44.8
MGA_2579	LOCUS_25710	sequence09:126896..128320(+)	partial			WP_012779382.1	adhesin-like autotransporter YpjA/EhaD	98.3	31.9	48.2
MGA_2581	LOCUS_25730	sequence09:129323..129568(-)	frameshift		129418	WP_000134788.1	transcriptional regulator	93.8	31.7	63.8
MGA_2582	LOCUS_25740	sequence09:129642..129899(-)	frameshift,internal_stop_codon	129909..129911(-),129921..129923(-)	129656	WP_001254938.1	IS30-like element IS30 family transposase	96.5	21.4	84.1
MGA_2583	LOCUS_25750	sequence09:130226..130468(-)	partial			WP_001130487.1	tyrosine-type recombinase/integrase	93.8	18.8	68.0
MGA_2587	LOCUS_25790	sequence09:133958..134839(-)	frameshift		134981	WP_010989230.1	peptide chain release factor 2	100.0	80.3	98.6
MGA_2660	LOCUS_26520	sequence09:208726..209364(+)	partial			WP_001049802.1	nucleoside permease	57.1	28.9	90.9
MGA_2663	LOCUS_26550	sequence09:213096..213428(-)	partial			WP_000111582.1	type VI secretion system contractile sheath large subunit	94.5	21.1	64.4
MGA_2664	LOCUS_26560	sequence09:213419..213697(-)	partial			WP_000041480.1	type VI secretion system contractile sheath small subunit	92.4	50.9	55.3
MGA_2667	LOCUS_26590	sequence09:217263..219626(+)	partial			WP_011105367.1	hypothetical protein	62.6	72.0	28.4
MGA_2677	LOCUS_26690	sequence10:108..2531(-)	partial			WP_000129924.1	phage head-binding domain-containing protein	15.6	19.1	82.5
MGA_2683	LOCUS_26750	sequence10:7758..8195(-)	frameshift		8239	WP_001122394.1	packaged DNA stabilization protein gp10	100.0	30.7	91.7
MGA_2684	LOCUS_26760	sequence10:8189..9175(-)	frameshift		8239	WP_001122379.1	packaged DNA stabilization protein gp10	95.1	66.1	91.7
MGA_2686	LOCUS_26780	sequence10:9666..10784(-)	partial			WP_000131484.1	DnaB-like helicase C-terminal domain-containing protein	91.4	71.1	97.4
MGA_2687	LOCUS_26790	sequence10:10774..10944(-)	partial			WP_000065666.1	hypothetical protein	100.0	18.7	98.2
MGA_2708	LOCUS_27000	sequence10:30279..31112(-)	partial			WP_011268313.1	DUF2235 domain-containing protein	91.3	48.4	35.2
MGA_2740	LOCUS_27320	sequence10:65405..65998(+)	partial			WP_000440515.1	Rpn family recombination-promoting nuclease/putative transposase	92.4	59.3	95.1
MGA_2741	LOCUS_27330	sequence10:66009..66206(+)	partial			WP_000440515.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	21.2	96.9
MGA_2845	LOCUS_28370	sequence10:178552..178734(-)	partial			WP_001127727.1	ferrioxamine B receptor FoxA	73.3	6.3	79.5
MGA_2853	LOCUS_28450	sequence10:189306..189644(-)	partial			WP_014206223.1	heavy metal translocating P-type ATPase	92.0	12.5	73.8
MGA_2854	LOCUS_28460	sequence10:189818..190390(+)	partial			WP_010930122.1	efflux transporter outer membrane subunit	95.8	39.6	60.4
MGA_2856	LOCUS_28480	sequence10:192219..192386(-)	partial			WP_015705848.1	Y-family DNA polymerase	78.2	10.2	88.4
MGA_2857	LOCUS_28490	sequence10:192555..192941(-)	partial			WP_001115839.1	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	100.0	16.2	84.4
MGA_2858	LOCUS_28500	sequence10:193068..193214(+)	internal_stop_codon	193212..193214(+)		WP_011069258.1	site-specific integrase	62.5	19.5	83.3
MGA_2859	LOCUS_28510	sequence10:193263..193418(+)	internal_stop_codon	193212..193214(+)		WP_000051894.1	site-specific integrase	100.0	13.2	84.3
MGA_2883	LOCUS_28750	sequence10:218254..218535(+)	partial			WP_000648539.1	DNA-binding transcriptional regulator YafC	100.0	30.6	87.1
MGA_2884	LOCUS_28760	sequence10:218568..219155(-)	partial			WP_011114740.1	IS630-like element IS630 family transposase	64.1	36.4	92.8
MGA_2929	LOCUS_29210	sequence11:49984..50334(-)	frameshift,internal_stop_codon	50331..50333(-)	50327	WP_011069343.1	HI1450 family dsDNA-mimic protein	98.3	84.4	91.2
MGA_2932	LOCUS_29240	sequence11:52685..53407(+)	partial			WP_010989146.1	TonB system transport protein TonB	55.4	55.0	88.7
MGA_2976	LOCUS_29680	sequence11:99791..100000(+)	partial			WP_000904930.1	recombinase family protein	50.7	19.9	78.4
MGA_2977	LOCUS_29690	sequence11:100320..100550(+)	frameshift		100502	WP_000394197.1	translesion error-prone DNA polymerase V autoproteolytic subunit	78.9	43.2	88.3
MGA_2978	LOCUS_29700	sequence11:100642..100908(+)	partial			WP_015366112.1	Y-family DNA polymerase	55.7	11.6	85.7
MGA_2982	LOCUS_29740	sequence11:103209..103442(+)	internal_stop_codon	103194..103196(+)		WP_015705848.1	Y-family DNA polymerase	100.0	18.3	79.2
MGA_2998	LOCUS_29900	sequence11:118261..118473(+)	frameshift		118252	WP_001174452.1	aldo/keto reductase	100.0	24.7	78.6
MGA_3016	LOCUS_30080	sequence11:135314..135820(-)	partial			WP_000979081.1	SDR family oxidoreductase	100.0	70.9	96.4
MGA_3035	LOCUS_30270	sequence11:150526..151494(+)	internal_stop_codon	151492..151494(+)		WP_000945629.1	methyl-accepting chemotaxis protein	100.0	83.9	93.8
MGA_3059	LOCUS_30510	sequence11:182762..183988(-)	partial			WP_011817181.1	SGNH/GDSL hydrolase family protein	52.7	77.0	42.9
MGA_3060	LOCUS_30520	sequence11:184920..185078(+)	partial			WP_011114760.1	hypothetical protein	98.1	21.4	51.0
MGA_3065	LOCUS_30570	sequence11:190080..191222(+)	frameshift		191195	WP_038419375.1	methyl-accepting chemotaxis protein	97.9	66.1	78.8
MGA_3066	LOCUS_30580	sequence11:191308..191706(+)	frameshift		191189	WP_038419375.1	methyl-accepting chemotaxis protein	90.9	21.3	78.3
MGA_3075	LOCUS_30670	sequence11:201034..201309(-)	partial			WP_000600614.1	ribulose-phosphate 3 epimerase family protein	100.0	43.3	92.3
MGA_3080	LOCUS_30720	sequence11:204708..205064(+)	partial			WP_012904569.1	IS66-like element accessory protein TnpA	95.8	50.2	38.3
MGA_3081	LOCUS_30730	sequence11:205061..205192(+)	partial			WP_000622996.1	IS66 family insertion sequence element accessory protein TnpB	100.0	40.6	88.4
MGA_3130	LOCUS_31200	sequence12:61182..61562(-)	partial			WP_000288732.1	cell division inhibitor SulA	100.0	74.6	92.9
MGA_3140	LOCUS_31300	sequence12:70987..71403(+)	partial			WP_001313946.1	Raf kinase inhibitor-like protein YbcL	77.5	59.6	60.0
MGA_3146	LOCUS_31360	sequence12:77966..78457(+)	partial			WP_001192403.1	transcription/translation regulatory transformer protein RfaH	52.1	50.6	39.5
MGA_3173	LOCUS_31630	sequence12:107685..107933(-)	partial			WP_000872356.1	anti-adapter protein IraM	86.6	65.4	39.4
MGA_3194	LOCUS_31840	sequence12:128054..128476(-)	partial			WP_000054243.1	N-acetylmannosamine-6-phosphate 2-epimerase	55.7	34.1	76.9
MGA_3199	LOCUS_31890	sequence12:133666..134064(+)	partial			WP_048255367.1	IS256-like element ISEc39 family transposase	57.6	18.9	82.9
MGA_3266	LOCUS_32560	sequence13:96..1010(-)	partial			WP_000059623.1	tyrosine-type recombinase/integrase	97.0	70.2	70.2
MGA_3363	LOCUS_33530	sequence13:91242..91604(-)	internal_stop_codon	91242..91244(-)		WP_000362003.1	site-specific integrase	100.0	27.5	86.7
MGA_3368	LOCUS_33580	sequence13:93815..94399(-)	partial			WP_011816549.1	hypothetical protein	63.4	66.7	72.4
MGA_3369	LOCUS_33590	sequence13:94748..94924(+)	partial			WP_000394197.1	translesion error-prone DNA polymerase V autoproteolytic subunit	67.2	28.1	89.7
MGA_3399	LOCUS_33890	sequence13:123260..123661(-)	partial			WP_001189090.1	phage integrase Arm DNA-binding domain-containing protein	98.5	36.3	69.5
MGA_3400	LOCUS_33900	sequence13:123930..124646(+)	partial			WP_001443810.1	DUF1076 domain-containing protein	39.1	44.5	47.3
MGA_3402	LOCUS_33920	sequence13:125089..125262(-)	partial			WP_000605676.1	type II toxin-antitoxin system RelE/ParE family toxin	100.0	62.0	54.4
MGA_3405	LOCUS_33950	sequence13:127058..127744(+)	partial			WP_001681975.1	hypothetical protein	36.8	16.5	58.3
MGA_3406	LOCUS_33960	sequence13:127891..128325(+)	partial			WP_000902877.1	tail fiber assembly protein	70.8	56.4	57.8
MGA_3408	LOCUS_33980	sequence13:132712..134823(+)	partial			WP_001115839.1	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	72.4	64.3	76.4
MGA_3409	LOCUS_33990	sequence13:134979..135128(+)	frameshift		134941	WP_000457648.1	Y-family DNA polymerase	100.0	11.6	85.7
MGA_3411	LOCUS_34010	sequence13:138089..139573(+)	partial			WP_001115839.1	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	98.2	61.4	76.9
MGA_3419	LOCUS_34090	sequence13:148883..149149(+)	frameshift		149137	WP_102800924.1	IS3 family transposase	98.9	23.8	97.7
MGA_3515	LOCUS_35050	sequence14:100033..100245(+)	partial			WP_000904965.1	recombinase family protein	62.9	30.1	61.4
MGA_3524	LOCUS_35130	sequence15:7822..8775(-)	partial			WP_015704147.1	peptidase domain-containing ABC transporter	96.2	43.4	35.4
MGA_3526	LOCUS_35150	sequence15:9116..9919(-)	frameshift		8971,9172	WP_015705588.1	peptidase domain-containing ABC transporter	92.5	35.3	34.7
MGA_3527	LOCUS_35160	sequence15:9922..10509(-)	partial			WP_004199991.1	HlyD family efflux transporter periplasmic adaptor subunit	87.2	41.0	26.6
MGA_3532	LOCUS_35210	sequence15:14986..15198(+)	frameshift		14809,14966	WP_011815648.1	tyrosine-type recombinase/integrase	94.3	19.9	68.2
MGA_3558	LOCUS_35470	sequence15:36028..36846(+)	partial			WP_001019480.1	aminopeptidase	60.3	46.1	80.5
MGA_3559	LOCUS_35480	sequence15:36731..37294(+)	partial			WP_000931359.1	putative frv operon regulatory protein	83.4	26.5	77.6
MGA_3561	LOCUS_35500	sequence15:38535..39170(+)	partial			WP_015705575.1	YdcK family protein	58.3	42.9	35.0
MGA_3563	LOCUS_35520	sequence15:41516..42718(+)	partial			WP_000181296.1	microcin export transporter peptidase/ATP-binding subunit MchF	100.0	57.1	69.2
MGA_3564	LOCUS_35530	sequence15:42921..43247(-)	partial			WP_005477792.1	AraC family transcriptional regulator	81.5	31.6	34.1
MGA_3566	LOCUS_35550	sequence15:44408..45235(-)	partial			WP_002225802.1	outer membrane protein assembly factor BamE	48.4	80.7	38.3
MGA_3614	LOCUS_36020	sequence16:10198..10398(-)	frameshift		10619,10411	WP_005173543.1	IS1182-like element ISYen4 family transposase	86.4	11.7	84.2
MGA_3615	LOCUS_36030	sequence16:10343..10552(-)	frameshift		10619,10411	WP_011817033.1	IS1182-like element ISYen4 family transposase	98.6	13.1	44.1
MGA_3616	LOCUS_36040	sequence16:10605..11405(-)	frameshift		10618,11476,10413	WP_005173543.1	IS1182-like element ISYen4 family transposase	99.6	53.0	67.5
MGA_3618	LOCUS_36060	sequence16:13161..13727(-)	partial			WP_011389115.1	dihydroxyacetone kinase subunit DhaK	63.3	37.5	39.2
MGA_3729	LOCUS_37170	sequence17:41108..41290(-)	partial			WP_001223322.1	tail fiber assembly protein	90.0	37.5	44.4
MGA_3869	LOCUS_38560	sequence19:46051..46365(-)	frameshift,internal_stop_codon	46050..46052(-)	46376,46467	WP_000749373.1	HTH-type transcriptional regulator YidZ	100.0	37.6	80.0
MGA_3870	LOCUS_38570	sequence19:46450..46617(-)	frameshift		46376,46467	WP_000749373.1	HTH-type transcriptional regulator YidZ	89.1	15.4	93.9
MGA_3871	LOCUS_38580	sequence19:46598..46933(-)	partial			WP_000819608.1	MFS transporter	96.4	27.1	92.5
MGA_3897	LOCUS_38830	sequence20:841..1629(-)	partial			WP_208631010.1	phage portal protein	45.0	34.2	60.2
MGA_3932	LOCUS_39180	sequence20:39241..39606(+)	internal_stop_codon	39604..39606(+)		WP_000865256.1	bifunctional UDP-sugar hydrolase/5'-nucleotidase	100.0	23.4	97.5
MGA_3933	LOCUS_39190	sequence20:39631..40797(+)	internal_stop_codon	39604..39606(+)		WP_000865256.1	bifunctional UDP-sugar hydrolase/5'-nucleotidase	100.0	74.9	97.4
MGA_3956	LOCUS_39410	sequence21:1678..2667(-)	partial			WP_001681975.1	hypothetical protein	96.7	72.4	55.2
MGA_3961	LOCUS_39460	sequence21:5538..8480(+)	partial			WP_101762974.1	phage tail tape measure protein	60.4	56.4	73.3
MGA_3995	LOCUS_39790	sequence22:1401..1703(-)	partial			WP_000722607.1	cag pathogenicity island Cag12 family protein	100.0	73.0	83.0
MGA_4031	LOCUS_40150	sequence22:28234..28524(-)	partial			WP_010884081.1	recombinase family protein	56.2	26.5	51.9
MGA_4032	LOCUS_40160	sequence22:28651..29241(-)	partial			WP_020479965.1	plasmid pRiA4b ORF-3 family protein	58.2	54.9	31.7
MGA_4045	LOCUS_40290	sequence22:38136..>39043(-)	partial			WP_000869132.1	YadA-like family protein	85.4	56.3	63.0
MGA_4063	LOCUS_40470	sequence23:18093..18251(+)	internal_stop_codon	18249..18251(+)		WP_023334100.1	PTS sugar transporter subunit IIB	100.0	54.9	85.7
MGA_4080	LOCUS_40640	sequence24:260..619(+)	frameshift		496	WP_002212753.1	tyrosine-type recombinase/integrase	65.5	18.6	78.2
MGA_4081	LOCUS_40650	sequence24:502..1509(+)	frameshift		496	WP_000059623.1	tyrosine-type recombinase/integrase	97.0	77.4	70.8
MGA_4091	LOCUS_40750	sequence24:10812..11195(-)	frameshift		11305,11311	WP_010947931.1	Dot/Icm type IV secretion system effector LpnE	77.2	25.1	38.8
MGA_4094	LOCUS_40780	sequence24:11783..12739(-)	partial			WP_000015298.1	rhs element protein RhsB	57.2	13.0	63.9
MGA_4099	LOCUS_40830	sequence24:21543..21908(+)	frameshift		21887	WP_000348793.1	type VI secretion system baseplate subunit TssG	90.9	33.9	43.4
MGA_4100	LOCUS_40840	sequence24:21869..22600(+)	frameshift		21887	WP_000896716.1	type VI secretion system baseplate subunit TssG	98.4	69.1	60.6
MGA_4103	LOCUS_40870	sequence24:25264..25536(-)	partial			WP_000954536.1	integrase arm-type DNA-binding domain-containing protein	100.0	21.5	77.8
MGA_4104	LOCUS_40880	sequence24:25526..25876(-)	partial			WP_002212753.1	tyrosine-type recombinase/integrase	92.2	25.5	72.9
MGA_4111	LOCUS_40950	sequence24:33808..35769(-)	partial			WP_164924857.1	tetratricopeptide repeat protein	57.4	64.2	23.1
MGA_4113	LOCUS_40970	sequence25:892..1167(+)	frameshift,internal_stop_codon	776..778(+)	880	WP_002210713.1	integrase domain-containing protein	78.0	17.5	47.9
MGA_4117	LOCUS_41010	sequence25:3263..4126(-)	partial			WP_003734016.1	glucosaminidase domain-containing protein	54.7	57.4	37.1
MGA_4142	LOCUS_41260	sequence25:33219..33770(+)	partial			WP_015704983.1	hypothetical protein	85.2	21.6	44.7
MGA_4143	LOCUS_41270	sequence25:33745..34296(+)	frameshift		33704	WP_015704983.1	hypothetical protein	92.3	26.1	31.9
MGA_4148	LOCUS_41310	sequence26:2942..5872(-)	partial			WP_002210084.1	RHS repeat-associated core domain-containing protein	72.4	72.6	38.4
MGA_4149	LOCUS_41320	sequence26:6151..9039(-)	partial			WP_002210084.1	RHS repeat-associated core domain-containing protein	72.1	71.2	40.2
MGA_4150	LOCUS_41330	sequence26:9058..12000(-)	partial			WP_011266499.1	RHS repeat-associated core domain-containing protein	69.0	68.3	39.7
MGA_4152	LOCUS_41350	sequence26:16470..20981(-)	partial			WP_011268803.1	neuraminidase-like domain-containing protein	55.6	53.7	38.7
MGA_4153	LOCUS_41360	sequence26:21075..26000(-)	partial			WP_046236980.1	Tc toxin subunit A	20.7	36.9	28.0
MGA_4154	LOCUS_41370	sequence26:26402..27229(-)	partial			WP_005161637.1	LysR family transcriptional regulator	36.7	38.9	32.2
MGA_4157	LOCUS_41400	sequence26:29297..29725(-)	partial			WP_000048458.1	exonuclease	97.2	16.6	51.4
MGA_4178	LOCUS_41610	sequence27:23901..24500(-)	partial			WP_013099374.1	porin OmpL	84.4	71.9	29.2
MGA_4181	LOCUS_41640	sequence28:195..506(-)	partial			WP_013096029.1	Hcp family type VI secretion system effector	86.4	55.6	67.4
MGA_4206	LOCUS_41890	sequence28:23302..24183(+)	frameshift,internal_stop_codon	24187..24189(+)	24180	WP_000946989.1	SPI-1 type III secretion system effector GTPase-activating protein SptP	100.0	53.6	59.0
MGA_4243	LOCUS_42250	sequence30:6228..6554(-)	partial			WP_000511773.1	integrase domain-containing protein	64.8	24.0	88.6
MGA_4247	LOCUS_42290	sequence30:8435..8758(-)	partial			WP_000246267.1	hypothetical protein	76.6	53.6	67.1
MGA_4248	LOCUS_42300	sequence30:9130..>11170(-)	partial			WP_002211013.1	RHS repeat-associated core domain-containing protein	57.3	46.2	65.3
MGA_4265	LOCUS_42470	sequence32:4866..5918(+)	partial			WP_052123654.1	fimbrial protein	71.7	71.7	29.0
MGA_4271	LOCUS_42530	sequence33:4042..4215(-)	partial			WP_000074110.1	heme exporter protein CcmD	64.9	52.9	94.6
MGA_4276	LOCUS_42570	sequence34:375..1133(-)	partial			WP_011707555.1	cyclic diguanylate phosphodiesterase	96.8	46.2	39.8
MGA_4287	LOCUS_42610	sequence41:142..894(+)	frameshift		49	WP_102800924.1	IS3 family transposase	100.0	68.3	96.8
MGA_4290	LOCUS_42630	sequence44:1..617(+)	partial			WP_000654812.1	IS5-like element IS903B family transposase	88.7	56.2	91.7
