# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence01:332..1015(-)	partial			WP_080138335.1	NEL-type E3 ubiquitin ligase domain-containing protein	89.9	37.0	36.9
MGA_16	LOCUS_00160	sequence01:16593..16895(-)	frameshift,internal_stop_codon	17132..17134(-),17060..17062(-)	16921	WP_001137620.1	curli production assembly/transport protein CsgG	100.0	36.1	98.0
MGA_17	LOCUS_00170	sequence01:17132..17320(-)	frameshift,internal_stop_codon	17363..17365(-),17132..17134(-),17060..17062(-)	16921	WP_001189332.1	curli production assembly/transport protein CsgG	100.0	22.4	93.5
MGA_18	LOCUS_00180	sequence01:17435..17650(-)	frameshift		17685	WP_001264073.1	curli production assembly/transport protein CsgF	100.0	51.4	97.2
MGA_19	LOCUS_00190	sequence01:17599..17850(-)	frameshift		17685	WP_001264073.1	curli production assembly/transport protein CsgF	65.1	39.1	90.7
MGA_21	LOCUS_00210	sequence01:18271..18462(-)	frameshift,internal_stop_codon	18518..18520(-)	18595,18685	WP_000481509.1	biofilm master transcriptional regulator CsgD	98.4	28.7	96.8
MGA_22	LOCUS_00220	sequence01:18674..18877(-)	frameshift,internal_stop_codon	18517..18519(-)	18594,18876,18684	WP_000481516.1	biofilm master transcriptional regulator CsgD	95.5	30.8	90.6
MGA_126	LOCUS_01260	sequence01:119786..120016(+)	frameshift,internal_stop_codon	119774..119776(+)	119686	WP_085947598.1	IS3-like element IS3 family transposase	71.1	14.0	83.3
MGA_127	LOCUS_01270	sequence01:120099..121166(+)	partial			WP_004599449.1	LD-carboxypeptidase	64.8	68.5	35.0
MGA_134	LOCUS_01340	sequence01:132812..133087(-)	partial			WP_001537478.1	RICIN domain-containing protein	100.0	52.6	91.2
MGA_141	LOCUS_01410	sequence01:140631..141002(-)	frameshift		140666	WP_000929974.1	cytochrome b	93.5	65.3	79.1
MGA_151	LOCUS_01510	sequence01:149653..149853(+)	partial			WP_000175788.1	cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9)	80.3	20.6	83.3
MGA_173	LOCUS_01730	sequence01:168499..168774(+)	frameshift,internal_stop_codon	168423..168425(+)	168482,168778,168756	WP_000029244.1	anaerobic sulfatase maturase	52.7	12.1	81.2
MGA_174	LOCUS_01740	sequence01:168862..169026(+)	frameshift		168778,168756	WP_000029244.1	anaerobic sulfatase maturase	100.0	13.6	96.3
MGA_205	LOCUS_02050	sequence01:199622..199831(-)	frameshift		199832	WP_000019093.1	catalase HPII	84.1	7.7	94.8
MGA_206	LOCUS_02060	sequence01:199818..200192(-)	frameshift		199831,200453,200359	WP_000019093.1	catalase HPII	96.8	16.0	96.7
MGA_207	LOCUS_02070	sequence01:200388..200633(-)	frameshift		200451,200715,200357,200742	WP_013097017.1	catalase HPII	100.0	10.8	74.1
MGA_208	LOCUS_02080	sequence01:201021..201245(-)	frameshift		200741,201023	WP_000019093.1	catalase HPII	100.0	9.9	94.6
MGA_220	LOCUS_02200	sequence01:211109..211552(+)	frameshift		211646,211495	WP_011073373.1	IS481-like element ISSod13 family transposase	82.3	35.0	74.4
MGA_221	LOCUS_02210	sequence01:211503..211658(+)	frameshift,internal_stop_codon	211872..211874(+),211890..211892(+)	211925,211646,211495	WP_011073373.1	IS481-like element ISSod13 family transposase	94.1	13.9	77.1
MGA_222	LOCUS_02220	sequence01:211697..211873(+)	frameshift,internal_stop_codon	211872..211874(+),211890..211892(+)	211925,211646,211495	WP_011073373.1	IS481-like element ISSod13 family transposase	100.0	16.8	84.5
MGA_250	LOCUS_02500	sequence01:240658..240936(-)	partial			WP_000261850.1	L-cystine transporter	100.0	20.5	93.5
MGA_260	LOCUS_02600	sequence01:250467..250778(-)	partial			WP_000756081.1	APC family permease	100.0	24.2	82.4
MGA_308	LOCUS_03080	sequence01:294948..295391(-)	partial			WP_001081018.1	C40 family peptidase	100.0	51.8	95.9
MGA_389	LOCUS_03890	sequence01:380058..380303(-)	frameshift		380299	WP_001068053.1	efflux MFS transporter YdeE	95.1	23.0	72.5
MGA_401	LOCUS_04010	sequence01:392405..392755(+)	partial			WP_013096462.1	porin OmpS2	50.0	16.5	53.2
MGA_412	LOCUS_04120	sequence01:402065..402286(-)	partial			WP_001138073.1	Tn3 family transposase	94.5	7.0	76.8
MGA_415	LOCUS_04150	sequence01:404384..404548(+)	frameshift,internal_stop_codon	404347..404349(+)	404379	WP_013095605.1	lysozyme	100.0	36.2	61.1
MGA_416	LOCUS_04160	sequence01:404722..405615(+)	partial			WP_046236980.1	Tc toxin subunit A	85.2	32.2	25.5
MGA_418	LOCUS_04180	sequence01:405769..407550(+)	partial			WP_002210089.1	SpvB/TcaC N-terminal domain-containing protein	57.5	23.7	45.0
MGA_447	LOCUS_04460	sequence01:438638..439126(+)	partial			WP_015366426.1	L-asparagine permease	48.8	16.3	93.7
MGA_465	LOCUS_04640	sequence01:462836..463060(-)	internal_stop_codon	463094..463096(-)		WP_000369547.1	XRE family transcriptional regulator	100.0	41.6	89.2
MGA_466	LOCUS_04650	sequence01:463265..463528(+)	frameshift,internal_stop_codon	463543..463545(+)	463538,463438	WP_001238501.1	benzoate/H(+) symporter BenE family transporter	69.0	15.3	86.7
MGA_472	LOCUS_04710	sequence01:468295..468486(+)	frameshift		468144	WP_000144622.1	M42 family metallopeptidase	66.7	11.3	95.2
MGA_473	LOCUS_04720	sequence01:468631..468867(+)	frameshift		468614,468527	WP_013094807.1	type VI secretion system tube protein TssD	96.2	47.2	58.7
MGA_489	LOCUS_04880	sequence01:491764..492264(-)	partial			WP_002209769.1	phosphatidate cytidylyltransferase	72.3	38.8	60.0
MGA_513	LOCUS_05120	sequence01:518798..519106(-)	partial			WP_000163369.1	helix-turn-helix domain-containing protein	100.0	51.0	95.1
MGA_514	LOCUS_05130	sequence01:519296..519703(+)	partial			WP_000097260.1	B3/4 domain-containing protein	100.0	59.2	94.8
MGA_516	LOCUS_05150	sequence01:520201..520485(-)	frameshift,internal_stop_codon	520724..520726(-)	520483,520615	WP_001062616.1	peroxiredoxin	97.9	51.9	78.1
MGA_552	LOCUS_05510	sequence01:557804..558169(-)	partial			WP_000904979.1	site-specific DNA recombinase	92.6	60.9	90.2
MGA_555	LOCUS_05540	sequence01:560081..560575(-)	partial			WP_000268883.1	prophage tail fiber N-terminal domain-containing protein	100.0	20.0	58.9
MGA_557	LOCUS_05560	sequence01:561198..561521(+)	partial			WP_224497204.1	IS110 family transposase	94.4	22.6	56.4
MGA_559	LOCUS_05580	sequence01:562066..562392(+)	frameshift,internal_stop_codon	562390..562392(+)	562410	WP_085929673.1	IS3-like element ISEc52 family transposase	100.0	27.8	93.5
MGA_567	LOCUS_05660	sequence01:572473..572955(+)	internal_stop_codon	573008..573010(+)		WP_010989147.1	cyclic di-GMP phosphodiesterase	73.8	17.9	78.0
MGA_587	LOCUS_05860	sequence01:591702..591914(+)	partial			WP_011815235.1	IS256 family transposase	90.0	15.8	79.4
MGA_590	LOCUS_05890	sequence01:592514..592765(+)	frameshift		592732,592774	WP_085929673.1	IS3-like element ISEc52 family transposase	88.0	18.8	95.9
MGA_591	LOCUS_05900	sequence01:593004..593498(+)	frameshift		593450	WP_005084748.1	IS3 family transposase	90.9	53.4	92.6
MGA_592	LOCUS_05910	sequence01:593474..593680(+)	frameshift		593450	WP_085929673.1	IS3-like element ISEc52 family transposase	97.1	17.0	89.4
MGA_625	LOCUS_06240	sequence01:627995..628327(+)	partial			WP_001361954.1	YchJ family protein	86.4	62.5	75.8
MGA_660	LOCUS_06590	sequence01:667043..667183(-)	frameshift,internal_stop_codon	666976..666978(-),667036..667038(-),667033..667035(-),667048..667050(-)	667060,667014,666972	WP_002209876.1	tagatose-bisphosphate aldolase subunit KbaZ	87.0	9.3	75.0
MGA_732	LOCUS_07310	sequence01:740431..741429(+)	partial			WP_001147139.1	type III secretion system effector SteA	46.4	74.3	44.9
MGA_798	LOCUS_07970	sequence01:807975..808187(-)	partial			WP_000100203.1	arabinose ABC transporter permease AraH	100.0	21.3	87.1
MGA_828	LOCUS_08270	sequence01:833655..834023(+)	partial			WP_000795470.1	alpha-amylase	99.2	24.5	92.6
MGA_857	LOCUS_08560	sequence01:856945..857355(-)	frameshift,internal_stop_codon	856944..856946(-),857475..857477(-)	857441	WP_000377043.1	phosphohydrolase	100.0	58.9	91.2
MGA_859	LOCUS_08580	sequence01:858881..859408(+)	frameshift,internal_stop_codon	858680..858682(+),858878..858880(+)	858636,859375	WP_001080666.1	porin OmpS1	94.9	43.1	78.2
MGA_860	LOCUS_08590	sequence01:859391..859579(-)	partial			WP_004166231.1	helix-turn-helix domain-containing protein	98.4	64.9	49.2
MGA_864	LOCUS_08630	sequence01:862209..863075(-)	frameshift		863110	WP_085954962.1	IS3 family transposase	100.0	74.2	84.7
MGA_866	LOCUS_08650	sequence01:863865..864053(-)	frameshift,internal_stop_codon	863885..863887(-)	863770,863894	WP_000059623.1	tyrosine-type recombinase/integrase	98.4	13.6	50.8
MGA_882	LOCUS_08790	sequence02:281..535(+)	partial			WP_120816036.1	site-specific integrase	89.3	17.4	74.7
MGA_896	LOCUS_08930	sequence02:12438..12665(-)	frameshift		12718	WP_000996054.1	putrescine ABC transporter ATP-binding subunit PotG	100.0	19.9	98.7
MGA_897	LOCUS_08940	sequence02:12569..13552(-)	frameshift		12718	WP_000996054.1	putrescine ABC transporter ATP-binding subunit PotG	85.0	73.7	97.5
MGA_981	LOCUS_09780	sequence02:108740..109087(-)	internal_stop_codon	109151..109153(-)		WP_052123654.1	fimbrial protein	99.1	33.6	36.8
MGA_982	LOCUS_09790	sequence02:109743..110024(+)	frameshift		110009	WP_152858326.1	IS3 family transposase	95.7	22.7	97.8
MGA_1016	LOCUS_10130	sequence02:146907..148097(-)	partial			WP_000030559.1	cell envelope integrity protein TolA	34.6	36.4	95.6
MGA_1034	LOCUS_10310	sequence02:165701..166294(-)	partial			WP_000622044.1	regulatory protein PocR	95.4	63.5	38.9
MGA_1041	LOCUS_10380	sequence02:175707..176054(-)	partial			WP_000254356.1	succinate dehydrogenase membrane anchor subunit	72.2	72.2	97.6
MGA_1043	LOCUS_10400	sequence02:176846..177091(-)	frameshift,internal_stop_codon	177103..177105(-)	177132	WP_001333072.1	hypothetical protein	42.0	55.7	73.5
MGA_1072	LOCUS_10690	sequence02:209753..210202(+)	partial			WP_000423368.1	tricarballylate utilization LysR family transcriptional regulator TcuR	95.3	46.1	95.1
MGA_1073	LOCUS_10700	sequence02:210240..210905(+)	partial			WP_000811143.1	tricarballylate utilization protein TcuB	100.0	58.3	88.2
MGA_1114	LOCUS_11110	sequence02:256237..256551(+)	partial			WP_000939753.1	fluoride efflux transporter CrcB	87.5	71.7	100.0
MGA_1181	LOCUS_11780	sequence02:333426..333776(-)	frameshift		333775	WP_025381298.1	IS630 family transposase	68.1	23.0	65.8
MGA_1185	LOCUS_11820	sequence02:337209..337586(+)	partial			WP_024265566.1	DUF1353 domain-containing protein	76.8	52.4	38.1
MGA_1186	LOCUS_11830	sequence02:337778..338026(-)	partial			WP_000158843.1	glycosyl hydrolase 108 family protein	90.2	41.7	58.7
MGA_1187	LOCUS_11840	sequence02:338188..338628(+)	partial			WP_121576702.1	IS3 family transposase	100.0	39.6	87.7
MGA_1188	LOCUS_11850	sequence02:339110..339358(-)	frameshift		339375	WP_011069533.1	IS66-like element ISSfl3 family transposase	100.0	15.4	74.4
MGA_1191	LOCUS_11880	sequence02:341704..341997(+)	partial			WP_001350488.1	site-specific integrase	100.0	25.1	94.8
MGA_1260	LOCUS_12570	sequence02:415463..416551(-)	partial			WP_010942354.1	site-specific integrase	62.2	42.3	37.1
MGA_1330	LOCUS_13270	sequence02:490338..490571(-)	frameshift		490672	WP_000484099.1	diguanylate cyclase AdrA	100.0	20.8	92.2
MGA_1331	LOCUS_13280	sequence02:490640..490837(-)	frameshift,internal_stop_codon	490883..490885(-)	490672	WP_000484099.1	diguanylate cyclase AdrA	84.6	14.9	87.3
MGA_1332	LOCUS_13290	sequence02:490883..491239(-)	frameshift,internal_stop_codon	490883..490885(-),491264..491266(-)	490675	WP_000484099.1	diguanylate cyclase AdrA	100.0	31.9	78.0
MGA_1343	LOCUS_13400	sequence02:500770..500949(-)	internal_stop_codon	501226..501228(-),501058..501060(-)		WP_000950094.1	hydrogen peroxide resistance inhibitor IprA	100.0	28.5	84.7
MGA_1358	LOCUS_13550	sequence02:521027..521176(-)	partial			WP_001159469.1	gold resistance metallochaperone GolB	95.9	73.4	74.5
MGA_1362	LOCUS_13590	sequence02:525855..526073(-)	partial			WP_015064994.1	CaiB/BaiF CoA-transferase family protein	68.1	12.3	59.2
MGA_1368	LOCUS_13650	sequence02:530965..531552(-)	frameshift		530969,531647	WP_005084748.1	IS3 family transposase	99.5	69.5	90.2
MGA_1369	LOCUS_13660	sequence02:531796..532047(-)	frameshift,internal_stop_codon	531649..531651(-)	531834,531795,531654	WP_085929673.1	IS3-like element ISEc52 family transposase	88.0	18.8	94.5
MGA_1373	LOCUS_13700	sequence02:533138..534055(+)	internal_stop_codon	534053..534055(+)		WP_064251564.1	ISNCY family transposase	99.7	64.2	55.9
MGA_1409	LOCUS_14050	sequence03:43241..44461(+)	partial			WP_001279286.1	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	53.0	57.0	87.5
MGA_1411	LOCUS_14070	sequence03:46326..46670(+)	partial			WP_000538693.1	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF	68.4	62.4	74.4
MGA_1502	LOCUS_14980	sequence03:140484..140843(+)	frameshift		140991,140807	WP_014208011.1	sulfite exporter TauE/SafE family protein	92.4	47.2	50.5
MGA_1503	LOCUS_14990	sequence03:141121..141633(-)	partial			WP_010927823.1	LysR substrate-binding domain-containing protein	97.6	56.4	40.1
MGA_1504	LOCUS_15000	sequence03:142107..142349(-)	frameshift		142354	WP_005084748.1	IS3 family transposase	98.8	28.3	86.1
MGA_1506	LOCUS_15020	sequence03:143274..143600(+)	frameshift		143594	WP_000917281.1	type III secretion system effector SopF	99.1	28.6	77.6
MGA_1507	LOCUS_15030	sequence03:143657..144010(+)	frameshift		143594,143972	WP_000917281.1	type III secretion system effector SopF	87.2	27.3	87.3
MGA_1508	LOCUS_15040	sequence03:144180..144401(+)	frameshift		143971	WP_000917281.1	type III secretion system effector SopF	98.6	19.3	77.8
MGA_1510	LOCUS_15060	sequence03:145779..146066(-)	internal_stop_codon	146130..146132(-)		WP_000930841.1	two-component system response regulator PgtA	100.0	22.9	90.5
MGA_1511	LOCUS_15070	sequence03:146130..146684(-)	internal_stop_codon	146130..146132(-)		WP_000930841.1	two-component system response regulator PgtA	100.0	44.3	91.8
MGA_1512	LOCUS_15080	sequence03:146684..146884(-)	internal_stop_codon	146939..146941(-)		WP_000467983.1	phosphoglycerate transport regulator PgtC	98.5	16.4	98.5
MGA_1513	LOCUS_15090	sequence03:147508..147852(+)	frameshift		147835,147451	WP_000955756.1	phosphoglycerate transporter PgtP	100.0	24.6	90.4
MGA_1514	LOCUS_15100	sequence03:148152..148814(+)	partial			WP_000955756.1	phosphoglycerate transporter PgtP	100.0	47.7	96.8
MGA_1535	LOCUS_15310	sequence03:174894..175313(-)	partial			WP_001109834.1	LysR family transcriptional regulator	100.0	45.1	93.5
MGA_1539	LOCUS_15350	sequence03:178881..179861(-)	partial			WP_000983126.1	cell division protein ZipA	53.7	53.4	92.6
MGA_1548	LOCUS_15440	sequence03:187581..187808(+)	frameshift		187742	WP_001263738.1	GMP synthase	72.0	22.6	87.0
MGA_1549	LOCUS_15450	sequence03:187835..188227(+)	frameshift,internal_stop_codon	188226..188228(+)	187742	WP_001263738.1	GMP synthase	99.2	54.0	88.4
MGA_1593	LOCUS_15890	sequence03:231682..231915(+)	partial			WP_000673295.1	penicillin binding protein PBP4B	100.0	17.8	96.1
MGA_1622	LOCUS_16180	sequence03:267750..268010(-)	frameshift,internal_stop_codon	268019..268021(-),268022..268024(-)	268018,268015,268036,267862,268012,268190,267871	WP_001212716.1	tetratricopeptide repeat protein	50.0	8.6	72.7
MGA_1623	LOCUS_16190	sequence03:268007..268162(-)	frameshift,internal_stop_codon	268019..268021(-),268022..268024(-)	267872,268018,268015,268036,267862,268012,268190,267871	WP_001212716.1	tetratricopeptide repeat protein	94.1	9.4	70.8
MGA_1627	LOCUS_16230	sequence03:272706..273398(+)	frameshift		272601	WP_009936261.1	glycine zipper family protein	96.5	75.0	56.3
MGA_1631	LOCUS_16270	sequence03:275830..276072(+)	partial			WP_074846341.1	DUF6402 family protein	83.8	21.4	37.3
MGA_1687	LOCUS_16830	sequence03:344396..344701(-)	frameshift		344736	WP_000361665.1	PTS transporter subunit EIIC	52.5	12.8	84.5
MGA_1698	LOCUS_16940	sequence03:354354..355784(-)	partial			WP_001115839.1	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	99.2	62.1	70.9
MGA_1699	LOCUS_16950	sequence03:356600..357019(+)	partial			WP_000268883.1	prophage tail fiber N-terminal domain-containing protein	100.0	17.4	51.5
MGA_1723	LOCUS_17180	sequence04:1543..1866(+)	internal_stop_codon	1864..1866(+)		WP_032642195.1	hypothetical protein	95.3	64.0	41.7
MGA_1724	LOCUS_17190	sequence04:2046..3203(+)	partial			WP_013097669.1	PAAR domain-containing protein	32.7	27.4	36.2
MGA_1729	LOCUS_17240	sequence04:7337..8218(-)	frameshift		8360	WP_010989230.1	peptide chain release factor 2	100.0	80.3	99.0
MGA_1805	LOCUS_18000	sequence04:86008..86451(-)	frameshift,internal_stop_codon	86461..86463(-)	86064,85971	WP_000511749.1	integrase domain-containing protein	87.1	61.9	50.9
MGA_1806	LOCUS_18010	sequence04:86461..86604(-)	internal_stop_codon	86461..86463(-)		WP_000511749.1	integrase domain-containing protein	100.0	18.8	69.4
MGA_1809	LOCUS_18040	sequence04:88593..88835(-)	partial			WP_000246267.1	hypothetical protein	98.8	51.6	68.4
MGA_1811	LOCUS_18060	sequence04:89562..90785(-)	partial			WP_011266335.1	RHS repeat-associated core domain-containing protein	34.6	43.2	44.2
MGA_1826	LOCUS_18210	sequence04:110899..111279(-)	partial			WP_001301619.1	anti-adapter protein IraD	77.8	72.3	49.0
MGA_1827	LOCUS_18220	sequence04:111279..111527(-)	partial			WP_000338756.1	Hcp family type VI secretion system effector	51.2	26.1	78.6
MGA_1833	LOCUS_18280	sequence04:119188..119727(+)	frameshift		119625	WP_000190176.1	glucuronate isomerase	81.6	31.1	97.9
MGA_1834	LOCUS_18290	sequence04:119648..120601(+)	frameshift		119625	WP_000190176.1	glucuronate isomerase	100.0	67.4	96.8
MGA_1837	LOCUS_18320	sequence04:122603..124186(-)	internal_stop_codon	124190..124192(-)		WP_000033690.1	bifunctional glutathionylspermidine amidase/synthase	99.8	85.0	98.3
MGA_1838	LOCUS_18330	sequence04:124190..124462(-)	internal_stop_codon	124190..124192(-)		WP_000033690.1	bifunctional glutathionylspermidine amidase/synthase	100.0	14.6	95.6
MGA_1850	LOCUS_18450	sequence04:134858..135028(-)	frameshift		135064,135027,135260	WP_005051898.1	TIGR00645 family protein	100.0	34.1	98.2
MGA_1851	LOCUS_18460	sequence04:135029..135313(-)	frameshift		135064,135027,135324,135260	WP_000439337.1	TIGR00645 family protein	74.5	42.7	94.3
MGA_1882	LOCUS_18770	sequence04:165832..166446(-)	partial			WP_000245226.1	4,5-DOPA dioxygenase extradiol	77.0	56.9	92.4
MGA_1915	LOCUS_19100	sequence04:205631..205768(+)	frameshift,internal_stop_codon	205521..205523(+)	205590,205535	WP_015369577.1	transcriptional regulator ExuR	100.0	17.4	84.4
MGA_1924	LOCUS_19190	sequence04:209919..210650(+)	frameshift		209668,210061	WP_089600859.1	IS3 family transposase	67.9	43.2	95.2
MGA_1925	LOCUS_19200	sequence04:210779..213091(+)	partial			WP_009941345.1	N-acetylmuramidase family protein	23.5	68.9	33.3
MGA_1928	LOCUS_19230	sequence04:213947..214162(-)	frameshift		214259	WP_121576702.1	IS3 family transposase	100.0	19.2	80.3
MGA_1929	LOCUS_19240	sequence04:214251..214763(-)	frameshift		214792,214261	WP_121576702.1	IS3 family transposase	98.8	45.5	79.8
MGA_1930	LOCUS_19250	sequence04:214787..215053(-)	frameshift		214792	WP_121576702.1	IS3 family transposase	98.9	23.6	93.1
MGA_1943	LOCUS_19380	sequence04:230018..230458(-)	frameshift,internal_stop_codon	230546..230548(-)	230032	WP_011817289.1	IS4 family transposase	97.9	36.0	82.5
MGA_1944	LOCUS_19390	sequence04:230546..230920(-)	internal_stop_codon	230546..230548(-)		WP_011817289.1	IS4 family transposase	99.2	31.0	89.4
MGA_2019	LOCUS_20140	sequence04:308330..308731(+)	frameshift		308620	WP_000184299.1	PDDEXK nuclease domain-containing protein	73.7	26.7	98.0
MGA_2020	LOCUS_20150	sequence04:308713..309402(+)	frameshift		308620	WP_000184299.1	PDDEXK nuclease domain-containing protein	99.1	61.9	87.2
MGA_2044	LOCUS_20390	sequence04:331109..331312(-)	frameshift,internal_stop_codon	331351..331353(-)	331359	WP_001116614.1	p-hydroxybenzoic acid efflux pump operon protein AaeX	100.0	74.4	100.0
MGA_2059	LOCUS_20540	sequence04:350501..352435(+)	partial			WP_000038372.1	putative mucin/carbohydrate-binding domain-containing protein	25.8	11.9	34.5
MGA_2063	LOCUS_20580	sequence04:355261..355905(+)	partial			WP_002268260.1	carbonic anhydrase family protein	81.3	67.6	35.6
MGA_2068	LOCUS_20630	sequence04:358942..359379(+)	frameshift		359528	WP_013098998.1	bifunctional diguanylate cyclase/phosphodiesterase	100.0	20.9	56.6
MGA_2069	LOCUS_20640	sequence04:359361..359618(+)	partial			WP_013098998.1	bifunctional diguanylate cyclase/phosphodiesterase	70.6	8.7	61.7
MGA_2076	LOCUS_20700	sequence05:429..1544(+)	partial			WP_001280050.1	type VI secretion system tube protein TssD	31.5	31.5	51.2
MGA_2077	LOCUS_20710	sequence05:1555..2238(+)	partial			WP_011143982.1	DUF4926 domain-containing protein	25.1	74.3	56.1
MGA_2080	LOCUS_20740	sequence05:4381..5865(-)	partial			WP_150625513.1	ParB family protein	64.8	57.4	49.2
MGA_2081	LOCUS_20750	sequence05:5862..6365(-)	internal_stop_codon	6477..6479(-)		WP_011817116.1	SPI-7-type island replicative DNA helicase	96.4	35.4	64.0
MGA_2082	LOCUS_20760	sequence05:6477..7217(-)	internal_stop_codon	6477..6479(-)		WP_001059486.1	SPI-7-type island replicative DNA helicase	100.0	54.4	52.4
MGA_2091	LOCUS_20850	sequence05:13861..14304(+)	partial			WP_089600859.1	IS3 family transposase	70.7	27.2	98.1
MGA_2097	LOCUS_20910	sequence05:18270..18449(-)	frameshift,internal_stop_codon	18269..18271(-),18242..18244(-)	18508	WP_001094618.1	tryptophan--tRNA ligase	100.0	17.5	78.0
MGA_2107	LOCUS_21010	sequence05:29287..29490(+)	frameshift		29451,29607	WP_000749985.1	Rpn family recombination-promoting nuclease/putative transposase	82.1	17.1	98.2
MGA_2108	LOCUS_21020	sequence05:29633..30238(+)	frameshift		29451,29607	WP_000749985.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	63.9	95.1
MGA_2113	LOCUS_21070	sequence05:34256..34807(-)	frameshift		34851	WP_013095437.1	AraC family transcriptional regulator	92.9	66.0	54.4
MGA_2131	LOCUS_21250	sequence05:55540..55764(+)	partial			WP_000431550.1	DNA-binding transcriptional activator BglJ	100.0	33.0	95.9
MGA_2145	LOCUS_21390	sequence05:67128..67715(-)	partial			WP_001064935.1	YjjW family glycine radical enzyme activase	100.0	67.9	90.8
MGA_2163	LOCUS_21570	sequence05:87182..87325(+)	frameshift,internal_stop_codon	87324..87326(+),87020..87022(+)	86977,87148	WP_001250764.1	two-component system response regulator CreB	95.7	19.7	73.3
MGA_2164	LOCUS_21580	sequence05:87338..87601(+)	frameshift,internal_stop_codon	87323..87325(+)	87147	WP_001187043.1	two-component system response regulator CreB	98.9	37.6	83.7
MGA_2176	LOCUS_21700	sequence05:100603..101124(+)	partial			WP_013096884.1	recombinase family protein	94.8	28.9	45.9
MGA_2183	LOCUS_21770	sequence05:107930..108448(+)	frameshift		108433	WP_015704710.1	glycosyl hydrolase family 18 protein	99.4	24.1	81.9
MGA_2184	LOCUS_21780	sequence05:108441..110015(+)	frameshift		108439	WP_015704340.1	glycosyl hydrolase family 18 protein	100.0	75.9	76.8
MGA_2185	LOCUS_21790	sequence05:110107..110412(+)	frameshift		110505	WP_015704341.1	chitinase	90.1	8.9	69.2
MGA_2186	LOCUS_21800	sequence05:110510..111379(+)	frameshift		110379	WP_015704341.1	chitinase	99.7	28.2	75.0
MGA_2224	LOCUS_22180	sequence05:154249..156138(+)	partial			WP_005089485.1	sulfatase-like hydrolase/transferase	58.7	60.0	29.3
MGA_2265	LOCUS_22590	sequence05:205054..205344(+)	internal_stop_codon	205342..205344(+)		WP_001115424.1	transcriptional regulator LeuO	93.8	28.7	98.9
MGA_2266	LOCUS_22600	sequence05:205354..206016(+)	internal_stop_codon	205342..205344(+)		WP_001115424.1	transcriptional regulator LeuO	100.0	70.1	93.6
MGA_2308	LOCUS_23020	sequence05:255576..256106(-)	frameshift		256234	WP_002213256.1	Tn3 family transposase	100.0	22.8	94.9
MGA_2309	LOCUS_23030	sequence05:256106..257104(-)	frameshift,internal_stop_codon	257123..257125(-)	256231	WP_002213256.1	Tn3 family transposase	88.3	38.0	91.1
MGA_2310	LOCUS_23040	sequence05:257123..258151(-)	frameshift,internal_stop_codon	257122..257124(-)	258349,258166	WP_001143760.1	Tn3-like element Tn3 family transposase	100.0	34.2	48.2
MGA_2311	LOCUS_23050	sequence05:258165..258341(-)	frameshift		258348,258573,258165	WP_002213256.1	Tn3 family transposase	100.0	7.5	89.7
MGA_2314	LOCUS_23080	sequence05:259866..262247(-)	partial			WP_011105367.1	hypothetical protein	68.2	77.2	27.7
MGA_2321	LOCUS_23150	sequence05:272887..273402(+)	frameshift,internal_stop_codon	272873..272875(+)	272773	WP_000291541.1	lactose permease	90.1	36.9	77.3
MGA_2322	LOCUS_23160	sequence05:273359..273568(+)	partial			WP_012602186.1	galactoside O-acetyltransferase	100.0	36.9	73.3
MGA_2367	LOCUS_23610	sequence05:324014..324169(+)	partial			WP_155106970.1	hypothetical protein	100.0	49.0	54.9
MGA_2409	LOCUS_24030	sequence06:12133..12456(-)	frameshift		12506	WP_000511287.1	protein YidI	98.1	70.5	59.0
MGA_2431	LOCUS_24250	sequence06:34083..34565(-)	internal_stop_codon	34572..34574(-)		WP_000535970.1	EamA family transporter	96.2	51.3	96.8
MGA_2437	LOCUS_24310	sequence06:44033..49249(-)	partial			WP_013097618.1	inverse autotransporter beta-barrel domain-containing protein	67.8	84.7	41.3
MGA_2513	LOCUS_25070	sequence06:131310..131645(-)	partial			WP_000761327.1	alpha-amylase	84.7	13.9	87.2
MGA_2514	LOCUS_25080	sequence06:132214..132786(+)	partial			WP_010989268.1	protein bax	100.0	69.3	95.8
MGA_2523	LOCUS_25170	sequence06:142748..142951(+)	frameshift,internal_stop_codon	143024..143026(+)	142933	WP_100249962.1	IS3 family transposase	98.5	14.5	87.9
MGA_2530	LOCUS_25240	sequence06:148151..148609(-)	partial			WP_000804690.1	glyoxylate/hydroxypyruvate reductase GhrB	94.7	44.4	94.4
MGA_2573	LOCUS_25670	sequence06:205019..206290(+)	partial			WP_011030909.1	glycoside hydrolase family 92 protein	83.2	16.0	29.8
MGA_2586	LOCUS_25800	sequence06:220283..220738(+)	frameshift		220639,220287	WP_001576500.1	MFS transporter	72.2	26.0	86.2
MGA_2588	LOCUS_25820	sequence06:221030..221176(+)	frameshift		221040,221157,221031	WP_001576500.1	MFS transporter	68.8	7.9	93.9
MGA_2589	LOCUS_25830	sequence06:221163..221384(+)	frameshift		221040,221157,221031	WP_001576500.1	MFS transporter	100.0	17.4	84.9
MGA_2621	LOCUS_26150	sequence06:253130..253459(+)	partial			WP_000105950.1	gluconate transporter	85.3	20.9	86.0
MGA_2637	LOCUS_26310	sequence06:278901..279353(-)	partial			WP_000958739.1	DNA utilization protein GntX	100.0	66.1	88.7
MGA_2640	LOCUS_26340	sequence06:280433..280618(-)	internal_stop_codon	280676..280678(-)		WP_000235943.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	21.1	83.1
MGA_2641	LOCUS_26350	sequence06:280676..280864(-)	internal_stop_codon	280676..280678(-)		WP_000235943.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	20.1	88.7
MGA_2701	LOCUS_26950	sequence06:341518..342114(+)	partial			WP_000861345.1	peptidylprolyl isomerase	74.7	75.5	100.0
MGA_2714	LOCUS_27070	sequence07:9854..10744(-)	partial			WP_000921674.1	AraC family transcriptional regulator	33.8	34.4	41.0
MGA_2719	LOCUS_27120	sequence07:14833..15099(+)	frameshift,internal_stop_codon	14815..14817(+)	15072	WP_000958574.1	glutathione S-transferase	90.9	36.0	83.8
MGA_2720	LOCUS_27130	sequence07:15090..15395(+)	frameshift,internal_stop_codon	14815..14817(+)	15072	WP_000958574.1	glutathione S-transferase	99.0	45.0	88.0
MGA_2733	LOCUS_27260	sequence07:29305..31041(+)	frameshift		31038	WP_000551709.1	heme lyase NrfEFG subunit NrfEF	99.7	77.8	81.9
MGA_2734	LOCUS_27270	sequence07:31034..31495(+)	frameshift		31038	WP_000551709.1	heme lyase NrfEFG subunit NrfEF	81.7	16.8	75.2
MGA_2774	LOCUS_27660	sequence07:72005..73345(+)	partial			WP_002485207.1	peptide ABC transporter substrate-binding protein	40.4	38.4	26.3
MGA_2775	LOCUS_27670	sequence07:73335..74303(+)	partial			WP_012584006.1	sulfur carrier protein ThiS adenylyltransferase ThiF	39.1	62.0	41.3
MGA_2791	LOCUS_27830	sequence07:93688..103272(-)	partial			WP_000052484.1	Ig-like domain-containing protein	91.8	43.1	26.2
MGA_2800	LOCUS_27920	sequence07:111732..112031(+)	partial			WP_089600859.1	IS3 family transposase	84.8	22.0	89.3
MGA_2805	LOCUS_27970	sequence07:115565..119758(+)	partial			WP_011391500.1	hypothetical protein	72.0	65.8	30.2
MGA_2808	LOCUS_28000	sequence07:121670..122224(+)	frameshift		122068	WP_000511773.1	integrase domain-containing protein	67.9	43.2	60.3
MGA_2809	LOCUS_28010	sequence07:122193..122552(+)	frameshift		122068	WP_000511749.1	integrase domain-containing protein	98.3	45.0	71.8
MGA_2821	LOCUS_28130	sequence07:134979..135626(-)	frameshift		135013,135655	WP_001229237.1	YjeJ family protein	94.0	70.9	91.6
MGA_2822	LOCUS_28140	sequence07:135593..135850(-)	frameshift		135655	WP_001229237.1	YjeJ family protein	91.8	27.4	80.8
MGA_2835	LOCUS_28270	sequence07:146444..146605(+)	frameshift		146584	WP_000342867.1	protein YjeN	88.7	46.2	62.5
MGA_2836	LOCUS_28280	sequence07:146587..146763(+)	frameshift		146584	WP_000342867.1	protein YjeN	89.7	50.0	75.0
MGA_2857	LOCUS_28490	sequence07:172211..172402(+)	frameshift,internal_stop_codon	172144..172146(+)	172095,172071	WP_000312608.1	DUF2170 family protein	100.0	47.0	85.7
MGA_2858	LOCUS_28500	sequence07:172435..172704(+)	partial			WP_000511966.1	PspA/IM30 family protein	76.4	29.3	89.7
MGA_2859	LOCUS_28510	sequence07:172715..172912(+)	partial			WP_000547734.1	DUF350 domain-containing protein	100.0	49.2	92.3
MGA_2860	LOCUS_28520	sequence07:172909..173073(+)	partial			WP_000943948.1	glutathionylspermidine synthase family protein	100.0	14.0	98.1
MGA_2895	LOCUS_28870	sequence07:205836..207047(+)	partial			WP_000065933.1	Hcp1 family type VI secretion system effector	55.8	58.4	65.1
MGA_2906	LOCUS_28980	sequence07:214664..214885(+)	partial			WP_010989308.1	BglG family transcription antiterminator	100.0	11.1	95.9
MGA_2911	LOCUS_29030	sequence07:218856..219089(-)	frameshift,internal_stop_codon	218856..218858(-)	219357,218741	WP_000155051.1	alpha,alpha-phosphotrehalase	100.0	14.0	81.8
MGA_2912	LOCUS_29040	sequence07:219035..219316(-)	frameshift,internal_stop_codon	218856..218858(-)	219366	WP_000155051.1	alpha,alpha-phosphotrehalase	83.9	14.0	70.5
MGA_2913	LOCUS_29050	sequence07:219346..220014(-)	frameshift		219366	WP_000155051.1	alpha,alpha-phosphotrehalase	100.0	42.4	86.7
MGA_2914	LOCUS_29060	sequence07:220280..220792(-)	frameshift		220411,220189,221069	WP_001407733.1	PTS trehalose transporter subunit IIBC	74.7	26.8	87.4
MGA_2915	LOCUS_29070	sequence07:220753..221055(-)	frameshift		221069	WP_011378955.1	PTS trehalose transporter subunit IIBC	86.0	18.2	86.0
MGA_2916	LOCUS_29080	sequence07:221052..221384(-)	frameshift		221069	WP_000048822.1	PTS trehalose transporter subunit IIBC	85.5	19.9	85.1
MGA_2928	LOCUS_29200	sequence07:233930..234229(+)	partial			WP_000635207.1	YhcH/YjgK/YiaL family protein	70.7	46.7	87.1
MGA_2932	LOCUS_29240	sequence07:236921..237235(-)	partial			WP_001519079.1	GNAT family N-acetyltransferase	100.0	62.3	94.2
MGA_2937	LOCUS_29290	sequence07:240534..241043(+)	partial			WP_001066967.1	YjgN family protein	96.4	41.3	85.3
MGA_2944	LOCUS_29360	sequence07:250362..250967(-)	partial			WP_001244064.1	LacI family DNA-binding transcriptional regulator	71.6	44.0	93.8
MGA_2945	LOCUS_29370	sequence07:250988..251722(-)	frameshift		251002	WP_001128336.1	gnt-II system L-idonate transporter	50.8	28.2	82.3
MGA_2946	LOCUS_29380	sequence07:251864..252160(-)	frameshift		251881	WP_001197416.1	L-idonate 5-dehydrogenase	93.9	26.8	80.4
MGA_2949	LOCUS_29410	sequence07:254629..254856(-)	internal_stop_codon	254866..254868(-)		WP_000142493.1	site-specific integrase	100.0	24.4	94.7
MGA_2950	LOCUS_29420	sequence07:254866..255174(-)	internal_stop_codon	254866..254868(-),255223..255225(-)		WP_000142493.1	site-specific integrase	100.0	33.1	98.0
MGA_2951	LOCUS_29430	sequence07:255223..255555(-)	internal_stop_codon	255223..255225(-)		WP_000142493.1	site-specific integrase	100.0	35.7	97.3
MGA_2961	LOCUS_29530	sequence07:265668..266969(-)	partial			WP_003243883.1	metallophosphoesterase	72.3	63.6	22.2
MGA_2968	LOCUS_29600	sequence07:274591..275883(+)	partial			WP_047813188.1	arylsulfatase	94.9	66.8	28.9
MGA_2974	LOCUS_29660	sequence07:281447..281707(-)	partial			WP_002210175.1	helix-turn-helix transcriptional regulator	77.9	73.6	74.6
MGA_2975	LOCUS_29670	sequence07:281817..282080(+)	partial			WP_000175313.1	helix-turn-helix transcriptional regulator	87.4	50.0	39.5
MGA_2976	LOCUS_29680	sequence07:282120..282341(+)	partial			WP_000175313.1	helix-turn-helix transcriptional regulator	82.2	39.5	53.3
MGA_2990	LOCUS_29820	sequence08:12863..13174(+)	internal_stop_codon	13172..13174(+)		WP_001212373.1	YfiR family protein	85.4	51.2	83.0
MGA_2991	LOCUS_29830	sequence08:13178..13381(+)	internal_stop_codon	13172..13174(+)		WP_001212373.1	YfiR family protein	97.0	37.8	90.8
MGA_2992	LOCUS_29840	sequence08:13443..14129(+)	frameshift		14108	WP_001030993.1	diguanylate cyclase DgcN	96.5	54.2	92.3
MGA_2993	LOCUS_29850	sequence08:14177..14593(+)	frameshift		14108	WP_001030993.1	diguanylate cyclase DgcN	100.0	34.0	89.1
MGA_3014	LOCUS_30060	sequence08:46172..46804(-)	partial			WP_011817289.1	IS4 family transposase	100.0	52.9	81.9
MGA_3015	LOCUS_30070	sequence08:47177..47365(-)	internal_stop_codon	47177..47179(-)		WP_011817289.1	IS4 family transposase	100.0	15.6	93.5
MGA_3016	LOCUS_30080	sequence08:48301..48627(-)	partial			WP_000905001.1	site-specific DNA recombinase	89.8	52.7	87.6
MGA_3115	LOCUS_31070	sequence08:149443..150324(-)	frameshift,internal_stop_codon	149437..149439(-)	149448,149238,149310	WP_000946989.1	SPI-1 type III secretion system effector GTPase-activating protein SptP	99.7	53.4	66.1
MGA_3130	LOCUS_31220	sequence08:162850..163194(-)	partial			WP_000555884.1	SPI-1 type III secretion system protein SpaM	85.1	66.0	86.6
MGA_3165	LOCUS_31560	sequence09:31690..35604(+)	partial			WP_000076972.1	DNA translocase FtsK	56.2	53.8	78.0
MGA_3172	LOCUS_31630	sequence09:43823..43999(-)	frameshift,internal_stop_codon	43573..43575(-),43780..43782(-),43645..43647(-)	43828	WP_000165879.1	isochorismate family cysteine hydrolase YcaC	91.4	25.5	83.0
MGA_3185	LOCUS_31760	sequence09:59212..59421(+)	frameshift		59143	WP_000792300.1	M48 family metallopeptidase	72.5	19.8	80.0
MGA_3192	LOCUS_31830	sequence09:67976..68437(+)	frameshift,internal_stop_codon	67962..67964(+)	67961	WP_013097301.1	winged helix-turn-helix domain-containing protein	92.2	34.5	80.9
MGA_3206	LOCUS_31970	sequence09:85756..86115(+)	partial			WP_000547191.1	IS4-like element IS4 family transposase	100.0	26.9	91.6
MGA_3209	LOCUS_32000	sequence09:89544..89756(+)	frameshift		89562,89748	WP_001698950.1	tail fiber assembly protein	91.4	33.5	59.4
MGA_3210	LOCUS_32010	sequence09:89744..89911(+)	frameshift		89562,89748	WP_000885629.1	tail fiber assembly protein	94.5	26.9	51.9
MGA_3211	LOCUS_32020	sequence09:90672..90932(+)	partial			WP_000457648.1	Y-family DNA polymerase	74.4	15.2	76.6
MGA_3239	LOCUS_32300	sequence09:122386..122592(-)	internal_stop_codon	122386..122388(-)		WP_015370386.1	hypothetical protein	100.0	61.8	61.8
MGA_3241	LOCUS_32320	sequence09:123236..123574(-)	partial			WP_013095191.1	arsenical resistance protein ArsH	71.4	33.3	67.5
MGA_3242	LOCUS_32330	sequence09:123595..123951(+)	frameshift		123939	WP_012540054.1	arsenite efflux transporter membrane subunit ArsB	96.6	26.6	85.1
MGA_3243	LOCUS_32340	sequence09:124096..124305(+)	frameshift		123939	WP_012540054.1	arsenite efflux transporter membrane subunit ArsB	72.5	11.7	94.0
MGA_3289	LOCUS_32790	sequence10:2709..3023(-)	frameshift,internal_stop_codon	2417..2419(-),2583..2585(-)	2696,2471,2567,2759	WP_000420898.1	ISAs1 family transposase	87.5	24.1	73.6
MGA_3292	LOCUS_32820	sequence10:6137..6901(-)	partial			WP_010965472.1	glycosyltransferase	81.1	64.0	35.8
MGA_3293	LOCUS_32830	sequence10:6898..7554(-)	partial			WP_003546270.1	glycosyltransferase	63.3	58.6	48.2
MGA_3330	LOCUS_33200	sequence10:53925..54323(+)	partial			WP_000134351.1	MFS transporter	86.4	24.9	68.4
MGA_3368	LOCUS_33580	sequence10:94820..95011(-)	internal_stop_codon	95015..95017(-)		WP_000194222.1	aromatic acid/H+ symport family MFS transporter	55.6	7.7	94.3
MGA_3369	LOCUS_33590	sequence10:95015..95392(-)	internal_stop_codon	95015..95017(-)		WP_000194222.1	aromatic acid/H+ symport family MFS transporter	88.8	24.6	86.5
MGA_3370	LOCUS_33600	sequence10:95518..95715(+)	internal_stop_codon	95713..95715(+)		WP_000024658.1	LysR substrate-binding domain-containing protein	100.0	21.5	96.9
MGA_3371	LOCUS_33610	sequence10:95887..96426(+)	internal_stop_codon	95713..95715(+)		WP_000024658.1	LysR substrate-binding domain-containing protein	100.0	59.3	91.6
MGA_3376	LOCUS_33660	sequence10:101002..101448(-)	partial			WP_046092923.1	IS630-like element ISEc33 family transposase	93.9	40.5	86.3
MGA_3381	LOCUS_33710	sequence10:104652..104810(-)	internal_stop_codon	104841..104843(-)		WP_001159868.1	type II toxin-antitoxin system toxin CcdB	71.2	36.6	83.8
MGA_3382	LOCUS_33720	sequence10:104893..105018(-)	internal_stop_codon	105067..105069(-)		WP_000813638.1	type II toxin-antitoxin system antitoxin CcdA	100.0	56.9	90.2
MGA_3383	LOCUS_33730	sequence10:105325..105591(+)	frameshift		105585	WP_121576702.1	IS3 family transposase	98.9	23.6	92.0
MGA_3384	LOCUS_33740	sequence10:105615..106433(+)	frameshift		105585	WP_121576702.1	IS3 family transposase	100.0	73.7	80.9
MGA_3385	LOCUS_33750	sequence10:106424..106741(+)	partial			WP_000956036.1	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	91.4	23.4	85.4
MGA_3428	LOCUS_34170	sequence11:26347..26751(+)	internal_stop_codon	26749..26751(+)		WP_001134817.1	hypothetical protein	100.0	35.8	98.5
MGA_3429	LOCUS_34180	sequence11:26782..26973(+)	internal_stop_codon	26749..26751(+)		WP_001134817.1	hypothetical protein	100.0	16.8	96.8
MGA_3464	LOCUS_34530	sequence11:63686..63937(+)	internal_stop_codon	63935..63937(+)		WP_002288260.1	TRAP transporter substrate-binding protein	100.0	24.3	56.6
MGA_3465	LOCUS_34540	sequence11:63977..64486(+)	internal_stop_codon	63935..63937(+)		WP_002358408.1	TRAP transporter substrate-binding protein	95.9	54.0	44.8
MGA_3466	LOCUS_34550	sequence11:64505..64651(+)	frameshift,internal_stop_codon	64649..64651(+)	64885	WP_001091409.1	TRAP transporter small permease	100.0	28.1	91.7
MGA_3467	LOCUS_34560	sequence11:64673..64954(+)	frameshift,internal_stop_codon	64649..64651(+)	64885	WP_001091409.1	TRAP transporter small permease	77.4	42.1	91.7
MGA_3468	LOCUS_34570	sequence11:65014..65925(+)	frameshift		65886	WP_000566798.1	TRAP transporter large permease	96.0	66.9	90.7
MGA_3469	LOCUS_34580	sequence11:65900..66322(+)	frameshift		65886	WP_000566798.1	TRAP transporter large permease	100.0	32.2	95.0
MGA_3470	LOCUS_34590	sequence11:66395..66700(-)	partial			WP_000378721.1	oligogalacturonate-specific porin KdgM family protein	93.1	41.4	92.6
MGA_3483	LOCUS_34720	sequence11:78316..78495(+)	partial			WP_000584106.1	LPS export ABC transporter permease LptF	98.3	15.8	82.8
MGA_3484	LOCUS_34730	sequence11:78535..78774(+)	internal_stop_codon	78772..78774(+)		WP_005086168.1	PTS fructose-like transporter subunit IIBC	100.0	16.4	92.4
MGA_3485	LOCUS_34740	sequence11:78802..79002(+)	internal_stop_codon	78772..78774(+)		WP_000445998.1	PTS fructose-like transporter subunit IIBC	97.0	13.3	81.2
MGA_3486	LOCUS_34750	sequence11:79092..79322(+)	partial			WP_000931299.1	putative frv operon regulatory protein	88.2	11.5	80.6
MGA_3487	LOCUS_34760	sequence11:79581..79913(+)	partial			WP_000931343.1	putative frv operon regulatory protein	99.1	18.7	66.1
MGA_3490	LOCUS_34790	sequence11:81494..82120(+)	partial			WP_015705575.1	YdcK family protein	59.1	42.9	34.3
MGA_3492	LOCUS_34810	sequence11:84466..85668(+)	partial			WP_000181296.1	microcin export transporter peptidase/ATP-binding subunit MchF	100.0	57.1	68.8
MGA_3493	LOCUS_34820	sequence11:85872..86198(-)	partial			WP_005477792.1	AraC family transcriptional regulator	81.5	31.6	34.1
MGA_3495	LOCUS_34840	sequence11:87358..88185(-)	partial			WP_002225802.1	outer membrane protein assembly factor BamE	48.4	80.7	37.6
MGA_3496	LOCUS_34850	sequence11:88250..92362(-)	partial			WP_004536696.1	ESPR-type extended signal peptide-containing protein	94.9	73.0	24.5
MGA_3511	LOCUS_34990	sequence11:105602..106420(-)	frameshift		105826	WP_001520529.1	sugar kinase	73.5	67.1	94.0
MGA_3534	LOCUS_35220	sequence12:183..434(-)	partial			WP_102203946.1	IS3-like element IS911 family transposase	86.7	18.5	98.6
MGA_3537	LOCUS_35250	sequence12:3158..3322(+)	frameshift		3090,3005	WP_000134788.1	transcriptional regulator	100.0	21.4	79.6
MGA_3539	LOCUS_35270	sequence12:4232..6778(-)	partial			WP_000554210.1	autotransporter YejO	36.6	35.8	54.5
MGA_3544	LOCUS_35320	sequence12:11374..11616(+)	frameshift,internal_stop_codon	11717..11719(+)	11523	WP_001270764.1	LysR family transcriptional regulator	55.0	15.3	88.6
MGA_3545	LOCUS_35330	sequence12:11537..11719(+)	frameshift,internal_stop_codon	11717..11719(+)	11523	WP_001270764.1	LysR family transcriptional regulator	100.0	20.9	90.0
MGA_3551	LOCUS_35390	sequence12:17463..17831(+)	frameshift,internal_stop_codon	17349..17351(+)	17816	WP_000848628.1	aspartate/glutamate racemase	97.5	50.6	87.4
MGA_3552	LOCUS_35400	sequence12:17800..18024(+)	frameshift		17816	WP_000848628.1	aspartate/glutamate racemase	93.2	29.4	92.8
MGA_3555	LOCUS_35430	sequence12:20312..20587(-)	partial			WP_000968342.1	LacI family DNA-binding transcriptional regulator	89.0	23.8	88.9
MGA_3607	LOCUS_35950	sequence12:82965..83237(-)	internal_stop_codon	83286..83288(-)		WP_000186405.1	two-component sensor histidine kinase BarA	100.0	9.8	94.4
MGA_3614	LOCUS_36020	sequence12:93604..93792(+)	internal_stop_codon	93790..93792(+)		WP_011817289.1	IS4 family transposase	100.0	15.6	93.5
MGA_3615	LOCUS_36030	sequence12:94165..94797(+)	partial			WP_011817289.1	IS4 family transposase	100.0	52.9	81.0
MGA_3622	LOCUS_36100	sequence12:102867..103322(+)	partial			WP_001233965.1	CRISPR-associated helicase/endonuclease Cas3	60.3	10.1	72.5
MGA_3635	LOCUS_36230	sequence12:112609..113439(+)	partial			WP_001272624.1	murein hydrolase activator NlpD	100.0	74.0	92.4
MGA_3641	LOCUS_36290	sequence12:117402..117977(-)	internal_stop_codon	117996..117998(-),117984..117986(-)		WP_000613182.1	DNA-binding transcriptional repressor YgbI	100.0	76.0	92.2
MGA_3642	LOCUS_36300	sequence12:117996..118160(-)	internal_stop_codon	117996..117998(-),117984..117986(-)		WP_000613182.1	DNA-binding transcriptional repressor YgbI	100.0	21.3	96.3
MGA_3739	LOCUS_37270	sequence14:12561..12710(+)	internal_stop_codon	12708..12710(+)		WP_000803316.1	LysR family transcriptional regulator	100.0	15.5	83.7
MGA_3740	LOCUS_37280	sequence14:12759..13334(+)	frameshift,internal_stop_codon	12708..12710(+)	13313	WP_000803316.1	LysR family transcriptional regulator	100.0	62.8	91.1
MGA_3741	LOCUS_37290	sequence14:13343..13480(+)	frameshift		13313	WP_000803316.1	LysR family transcriptional regulator	100.0	14.8	73.3
MGA_3798	LOCUS_37860	sequence14:65637..68564(+)	partial			WP_002211013.1	RHS repeat-associated core domain-containing protein	69.1	79.3	57.4
MGA_3799	LOCUS_37870	sequence14:68983..70053(-)	partial			WP_000343613.1	IS256-like element ISEc39 family transposase	44.1	39.1	91.7
MGA_3803	LOCUS_37910	sequence14:74930..75073(-)	frameshift		75126	WP_002212753.1	tyrosine-type recombinase/integrase	97.9	11.0	58.7
MGA_3890	LOCUS_38770	sequence16:35055..35441(+)	partial			WP_001323326.1	transglycosylase SLT domain-containing protein	96.9	62.0	59.7
MGA_3893	LOCUS_38800	sequence16:37486..37632(-)	partial			WP_013087182.1	hypothetical protein	100.0	72.7	68.8
MGA_3922	LOCUS_39090	sequence16:57123..57425(+)	frameshift		57392	WP_011815235.1	IS256 family transposase	90.0	22.5	86.7
MGA_3923	LOCUS_39100	sequence16:57599..57994(+)	frameshift		57392	WP_011815235.1	IS256 family transposase	100.0	32.8	89.3
MGA_3926	LOCUS_39130	sequence16:59013..59429(-)	partial			WP_005693196.1	DsbA family protein	93.5	60.5	38.0
MGA_3994	LOCUS_39790	sequence18:2685..3062(+)	frameshift,internal_stop_codon	3153..3155(+),2655..2657(+)	3035	WP_000207227.1	class I SAM-dependent methyltransferase	93.6	45.7	87.2
MGA_4008	LOCUS_39930	sequence18:16222..17775(+)	internal_stop_codon	17773..17775(+)		WP_015705646.1	type VI secretion system ATPase TssH	99.4	58.3	80.2
MGA_4009	LOCUS_39940	sequence18:17827..18879(+)	internal_stop_codon	17773..17775(+)		WP_013096433.1	type VI secretion system ATPase TssH	98.3	45.3	89.8
MGA_4010	LOCUS_39950	sequence18:18894..19463(+)	partial			WP_004526753.1	type VI secretion system Vgr family protein	66.7	11.9	41.7
MGA_4014	LOCUS_39990	sequence18:25015..25869(+)	partial			WP_010882798.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	87.7	38.3	32.6
MGA_4047	LOCUS_40320	sequence19:4072..6987(-)	partial			WP_002210084.1	RHS repeat-associated core domain-containing protein	69.8	70.1	39.3
MGA_4048	LOCUS_40330	sequence19:7266..10154(-)	partial			WP_011266499.1	RHS repeat-associated core domain-containing protein	70.6	68.3	41.0
MGA_4049	LOCUS_40340	sequence19:10174..13128(-)	partial			WP_011266499.1	RHS repeat-associated core domain-containing protein	68.7	68.3	39.4
MGA_4051	LOCUS_40360	sequence19:17599..22125(-)	partial			WP_011268803.1	neuraminidase-like domain-containing protein	55.1	53.4	38.6
MGA_4052	LOCUS_40370	sequence19:22220..27139(-)	partial			WP_046236980.1	Tc toxin subunit A	21.2	37.8	27.2
MGA_4070	LOCUS_40550	sequence19:48132..48704(-)	frameshift,internal_stop_codon	48743..48745(-)	48832,48877,48718	WP_014344509.1	elongation factor P-like protein YeiP	100.0	71.2	100.0
MGA_4091	LOCUS_40760	sequence20:18313..18534(-)	frameshift		18342	WP_001343187.1	type III secretion system effector OspD3	100.0	12.9	52.1
MGA_4093	LOCUS_40780	sequence20:18884..19135(-)	frameshift		19191	WP_000953022.1	type III secretion system effector arginine glycosyltransferase NleB	94.0	23.7	66.7
MGA_4094	LOCUS_40790	sequence20:19159..19914(-)	frameshift		19191	WP_000953022.1	type III secretion system effector arginine glycosyltransferase NleB	84.1	64.1	61.6
MGA_4096	LOCUS_40810	sequence20:21570..21779(+)	frameshift,internal_stop_codon	21939..21941(+)	21520,21763,21824,21550	WP_065358496.1	IS4 family transposase	89.9	19.9	58.8
MGA_4160	LOCUS_41430	sequence22:3977..4393(+)	partial			WP_011037248.1	DUF3577 domain-containing protein	44.9	68.1	58.1
MGA_4161	LOCUS_41440	sequence22:4544..4978(+)	partial			WP_013095156.1	TcpQ domain-containing protein	76.4	25.9	54.1
MGA_4165	LOCUS_41480	sequence22:6748..7155(+)	partial			WP_015038881.1	integrating conjugative element protein	85.9	65.5	53.4
MGA_4183	LOCUS_41660	sequence23:2917..3240(+)	partial			WP_010971998.1	iron ABC transporter permease	100.0	19.0	46.7
MGA_4186	LOCUS_41680	sequence23:7145..7420(-)	internal_stop_codon	7502..7504(-),7535..7537(-)		WP_034455038.1	IS110 family transposase	82.4	23.4	78.2
MGA_4189	LOCUS_41710	sequence23:11234..11509(-)	frameshift,internal_stop_codon	11533..11535(-)	11514	WP_015675416.1	tail fiber assembly protein	100.0	49.2	56.5
MGA_4190	LOCUS_41720	sequence23:11533..11772(-)	frameshift,internal_stop_codon	11533..11535(-)	11514	WP_001698950.1	tail fiber assembly protein	100.0	41.4	64.6
MGA_4191	LOCUS_41730	sequence23:12488..12736(+)	partial			WP_000533600.1	tyrosine-type recombinase/integrase	82.9	20.0	69.1
MGA_4193	LOCUS_41750	sequence23:14209..14601(+)	frameshift		14598,14159	WP_032666220.1	integrase arm-type DNA-binding domain-containing protein	99.2	29.7	53.5
MGA_4194	LOCUS_41760	sequence23:14646..14921(+)	frameshift		14598	WP_001218809.1	integrase arm-type DNA-binding domain-containing protein	91.2	19.8	56.6
MGA_4196	LOCUS_41780	sequence24:279..851(-)	partial			WP_011815235.1	IS256 family transposase	94.7	45.0	84.4
MGA_4199	LOCUS_41810	sequence24:1678..1944(+)	frameshift		1932	WP_102800924.1	IS3 family transposase	98.9	23.8	97.7
MGA_4200	LOCUS_41820	sequence24:1977..2207(+)	frameshift		1932	WP_102800924.1	IS3 family transposase	81.6	16.9	96.8
MGA_4206	LOCUS_41880	sequence24:8627..8797(+)	internal_stop_codon	8795..8797(+)		WP_002213256.1	Tn3 family transposase	96.4	7.0	59.3
MGA_4207	LOCUS_41890	sequence24:8930..10573(+)	internal_stop_codon	8795..8797(+),10571..10573(+)		WP_001143760.1	Tn3-like element Tn3 family transposase	99.8	54.5	62.1
MGA_4208	LOCUS_41900	sequence24:10679..11635(+)	internal_stop_codon	10571..10573(+)		WP_001143760.1	Tn3-like element Tn3 family transposase	98.7	31.4	81.5
MGA_4218	LOCUS_41960	sequence26:2503..2715(-)	partial			WP_000186540.1	heme exporter protein CcmD	71.4	72.5	74.0
MGA_4233	LOCUS_42030	sequence35:1..816(+)	partial			WP_000031748.1	elongation factor Tu	100.0	68.8	95.6
MGA_4235	LOCUS_42040	sequence37:1..612(+)	partial			WP_102800924.1	IS3 family transposase	100.0	55.5	97.5
