{ "type": "genome", "identifier": "GCF_008710155.1", "organism": "Sphingobium limneticum", "title": "Sphingobium limneticum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Guangdong Institute of Microbiology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_008710155.1", "bioproject": "PRJNA224116", "biosample": "SAMN12787675", "wgs_master": "VYPZ00000000.1", "refseq_category": "na", "taxid": "1007511", "species_taxid": "1007511", "organism_name": "Sphingobium limneticum", "infraspecific_name": "strain=DSM 25076", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/09/26", "asm_name": "ASM871015v1", "asm_submitter": "Guangdong Institute of Microbiology", "gbrs_paired_asm": "GCA_008710155.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/710/155/GCF_008710155.1_ASM871015v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5092581", "genome_size_ungapped": "5092581", "gc_percent": "63.000000", "replicon_count": "0", "scaffold_count": "109", "contig_count": "109", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_008710155.1-RS_2024_05_17", "annotation_date": "2024-05-17", "total_gene_count": "4889", "protein_coding_gene_count": "4727", "non_coding_gene_count": "69", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-09-26", "dateModified": "2019-09-26", "datePublished": "2019-09-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingobium limneticum" ], "sample_taxid": [ "1007511" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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1643, "total_fragments": 1646, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Sphingobium cupriresistens", "strain": "strain=CCTCC AB 2011146", "accession": "GCA_004152865.1", "taxid": 1132417, "species_taxid": 1132417, "relation_to_type": "type", "validated": true, "ani": 86.3828, "matched_fragments": 944, "total_fragments": 1646, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium psychrophilum", "strain": "strain=AR-3-1", "accession": "GCA_012927105.1", "taxid": 2728834, "species_taxid": 2728834, "relation_to_type": "type", "validated": true, "ani": 86.0991, "matched_fragments": 1015, "total_fragments": 1646, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium yanoikuyae", "strain": "strain=ATCC 51230", "accession": "GCA_000315525.1", "taxid": 13690, "species_taxid": 13690, "relation_to_type": "suspected-type", "validated": true, "ani": 85.1395, "matched_fragments": 979, "total_fragments": 1646, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium scionense", "strain": "strain=DSM 19371", "accession": "GCA_014197035.1", "taxid": 1404341, "species_taxid": 1404341, "relation_to_type": "type", "validated": true, "ani": 84.2372, "matched_fragments": 996, "total_fragments": 1646, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium terrigena", "strain": "strain=EO9", "accession": "GCA_003591655.1", "taxid": 2304063, "species_taxid": 2304063, "relation_to_type": "type", "validated": true, "ani": 83.9884, "matched_fragments": 921, "total_fragments": 1646, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium amiense", "strain": "strain=NBRC 102518", "accession": "GCA_001591305.1", "taxid": 135719, "species_taxid": 135719, "relation_to_type": "type", "validated": true, "ani": 83.0608, "matched_fragments": 771, "total_fragments": 1646, "ani_threshold": 95, "status": "below_threshold" }, { 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