{ "type": "genome", "identifier": "GCF_008801285.1", "organism": "Vibrio kanaloae", "title": "Vibrio kanaloae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Gothenburg - CCUG", "publication": [ {} ], "properties": { "assembly_accession": "GCF_008801285.1", "bioproject": "PRJNA224116", "biosample": "SAMN12697599", "wgs_master": "VZPY00000000.1", "refseq_category": "na", "taxid": "170673", "species_taxid": "170673", "organism_name": "Vibrio kanaloae", "infraspecific_name": "strain=CCUG 56968", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/10/01", "asm_name": "ASM880128v1", "asm_submitter": "University of Gothenburg - CCUG", "gbrs_paired_asm": "GCA_008801285.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/801/285/GCF_008801285.1_ASM880128v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4580125", "genome_size_ungapped": "4580125", "gc_percent": "44.000000", "replicon_count": "0", "scaffold_count": "73", "contig_count": "73", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_008801285.1-RS_2024_04_23", "annotation_date": "2024-04-23", "total_gene_count": "4133", "protein_coding_gene_count": "3936", "non_coding_gene_count": "143", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-10-01", "dateModified": "2019-10-01", "datePublished": "2019-10-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Vibrio kanaloae" ], "sample_taxid": [ "170673" ], "sample_host_organism": [ "Ostrea edulis" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "France" ], 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"status": "inconclusive" }, { "organism_name": "Vibrio kanaloae", "strain": "strain=LMG 20539", "accession": "GCA_024347535.1", "taxid": 170673, "species_taxid": 170673, "relation_to_type": "type", "validated": true, "ani": 99.9968, "matched_fragments": 1506, "total_fragments": 1507, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vibrio toranzoniae", "strain": "strain=CECT 7225", "accession": "GCA_900089765.1", "taxid": 1194427, "species_taxid": 1194427, "relation_to_type": "type", "validated": true, "ani": 95.3825, "matched_fragments": 1344, "total_fragments": 1507, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vibrio toranzoniae", "strain": "strain=Vb 10.8", "accession": "GCA_001541335.1", "taxid": 1194427, "species_taxid": 1194427, "relation_to_type": "type", "validated": true, "ani": 95.3801, "matched_fragments": 1326, "total_fragments": 1507, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vibrio toranzoniae", 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95.2787, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000272045.2", "gtdb_species": "s__Vibrio crassostreae_C", "ani": 89.4626, "matched_fragments": 1251, "total_fragments": 1507, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.007, "mean_intra_species_ani": "97.54", "min_intra_species_ani": "97.16", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.87", "num_clustered_genomes": 25, "status": "-" }, { "accession": "GCF_000272105.2", "gtdb_species": "s__Vibrio splendidus_I", "ani": 89.2704, "matched_fragments": 1190, "total_fragments": 1507, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": 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