{ "type": "genome", "identifier": "GCF_008801475.1", "organism": "Pseudomonas moorei", "title": "Pseudomonas moorei", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Gothenburg - CCUG", "publication": [ {} ], "properties": { "assembly_accession": "GCF_008801475.1", "bioproject": "PRJNA224116", "biosample": "SAMN12697590", "wgs_master": "VZPP00000000.1", "refseq_category": "na", "taxid": "395599", "species_taxid": "395599", "organism_name": "Pseudomonas moorei", "infraspecific_name": "strain=CCUG 53114", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/10/01", "asm_name": "ASM880147v1", "asm_submitter": "University of Gothenburg - CCUG", "gbrs_paired_asm": "GCA_008801475.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/801/475/GCF_008801475.1_ASM880147v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6472558", "genome_size_ungapped": "6472558", "gc_percent": "59.500000", "replicon_count": "0", "scaffold_count": "59", "contig_count": "59", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_008801475.1-RS_2024_05_08", "annotation_date": "2024-05-08", "total_gene_count": "6062", "protein_coding_gene_count": "5893", "non_coding_gene_count": "74", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-10-01", "dateModified": "2019-10-01", "datePublished": "2019-10-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas moorei" ], "sample_taxid": [ "395599" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: River Elbe,Hamburg" ], "sample_host_location_id": [], "data_size": "1.819 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "6472558", "Number of Sequences": "59", "Longest Sequences (bp)": "593577", "N50 (bp)": "381195", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "59.7", "Number of CDSs": "5998", "Average Protein Length": "314.4", "Coding Ratio (%)": "87.4", "Number of rRNAs": "10", "Number of tRNAs": "66", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Pseudomonas moorei", "strain": "strain=CCUG 53114", "accession": "GCA_008801475.1", "taxid": 395599, "species_taxid": 395599, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2129, "total_fragments": 2132, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas mohnii", "strain": "strain=DSM 18327", "accession": "GCA_900105115.1", "taxid": 395600, "species_taxid": 395600, "relation_to_type": "type", "validated": true, "ani": 92.5151, "matched_fragments": 1731, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas izuensis", "strain": "strain=IzPS43_3003", "accession": "GCA_009861505.1", "taxid": 2684212, "species_taxid": 2684212, "relation_to_type": "type", "validated": true, "ani": 87.9648, "matched_fragments": 1584, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas reinekei", "strain": "strain=CCUG 53116", "accession": "GCA_008801455.1", "taxid": 395598, "species_taxid": 395598, "relation_to_type": "type", "validated": true, "ani": 87.9037, "matched_fragments": 1520, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas reinekei", "strain": "strain=MT1", "accession": "GCA_001945365.1", "taxid": 395598, "species_taxid": 395598, "relation_to_type": "type", "validated": true, "ani": 87.8767, "matched_fragments": 1523, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas jessenii", "strain": "strain=DSM 17150", "accession": "GCA_002236115.1", "taxid": 77298, "species_taxid": 77298, "relation_to_type": "suspected-type", "validated": true, "ani": 87.5363, "matched_fragments": 1549, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas laurylsulfatiphila", "strain": "strain=AP3_16", "accession": "GCA_002934665.1", "taxid": 2011015, "species_taxid": 2011015, "relation_to_type": "type", "validated": true, "ani": 87.5297, "matched_fragments": 1580, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas azerbaijanoccidens", "strain": "strain=SWRI74", "accession": "GCA_019145495.1", "taxid": 2842347, "species_taxid": 2842347, "relation_to_type": "type", "validated": true, "ani": 87.469, "matched_fragments": 1534, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas azerbaijanoriens", "strain": "strain=SWRI123", "accession": "GCA_019139795.1", "taxid": 2842350, "species_taxid": 2842350, "relation_to_type": "type", "validated": true, "ani": 87.3655, "matched_fragments": 1537, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lini", "strain": "strain=CCUG 51522", "accession": "GCA_008801525.1", "taxid": 163011, "species_taxid": 163011, "relation_to_type": "type", "validated": true, "ani": 86.7377, "matched_fragments": 1401, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas farris", "strain": "strain=SWRI79", "accession": "GCA_019145235.1", "taxid": 2841207, "species_taxid": 2841207, "relation_to_type": "type", "validated": true, "ani": 86.7333, "matched_fragments": 1397, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lini", "strain": "strain=DSM 16768", "accession": "GCA_001042905.1", "taxid": 163011, "species_taxid": 163011, "relation_to_type": "type", "validated": true, "ani": 86.6739, "matched_fragments": 1414, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas pharyngis", "strain": "strain=BML-PP036", "accession": "GCA_021602345.1", "taxid": 2892333, "species_taxid": 2892333, "relation_to_type": "type", "validated": true, "ani": 85.9428, "matched_fragments": 1404, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas sputi", "strain": "strain=BML-PP014", "accession": "GCA_021603585.1", "taxid": 2892325, "species_taxid": 2892325, "relation_to_type": "type", "validated": true, "ani": 85.8183, "matched_fragments": 1360, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas germanica", "strain": "strain=FIT28", "accession": "GCA_019614655.1", "taxid": 2815720, "species_taxid": 2815720, "relation_to_type": "type", "validated": true, "ani": 85.2486, "matched_fragments": 1381, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas rhizophila", "strain": "strain=S211", "accession": "GCA_003033885.1", "taxid": 2045200, "species_taxid": 2045200, "relation_to_type": "type", "validated": true, "ani": 83.861, "matched_fragments": 1203, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas benzenivorans", "strain": "strain=DSM 8628", "accession": "GCA_900100495.1", "taxid": 556533, "species_taxid": 556533, "relation_to_type": "type", "validated": true, "ani": 79.8916, "matched_fragments": 781, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 79.7968, "matched_fragments": 708, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas composti", "strain": "strain=TR7-09", "accession": "GCA_000747175.1", "taxid": 370776, "species_taxid": 370776, "relation_to_type": "type", "validated": true, "ani": 75.9713, "matched_fragments": 97, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas composti", "strain": "strain=DSM 18010", "accession": "GCA_000426365.1", "taxid": 370776, "species_taxid": 370776, "relation_to_type": "type", "validated": true, "ani": 75.8807, "matched_fragments": 99, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Malikia granosa", "strain": "strain=P1", "accession": "GCA_002980595.1", "taxid": 263067, "species_taxid": 263067, "relation_to_type": "type", "validated": true, "ani": 75.8191, "matched_fragments": 98, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_008801475.1", "gtdb_species": "s__Pseudomonas_E moorei", "ani": 100.0, "matched_fragments": 2129, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_900105115.1", "gtdb_species": "s__Pseudomonas_E mohnii", "ani": 92.5106, "matched_fragments": 1732, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.13", "min_intra_species_ani": "96.18", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.79", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_000802965.1", "gtdb_species": "s__Pseudomonas_E fluorescens_A", "ani": 88.3797, "matched_fragments": 1562, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019200975.1", "gtdb_species": "s__Pseudomonas_E sp019200975", "ani": 88.3168, "matched_fragments": 1654, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900187565.1", "gtdb_species": "s__Pseudomonas_E sp900187565", "ani": 88.0344, "matched_fragments": 1545, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.02", "min_intra_species_ani": "95.89", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.84", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002356535.2", "gtdb_species": "s__Pseudomonas_E sp002356535", "ani": 87.9383, "matched_fragments": 1628, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.89", "min_intra_species_ani": "96.62", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_902497845.1", "gtdb_species": "s__Pseudomonas_E fluorescens_BN", "ani": 87.5346, "matched_fragments": 1535, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.81", "min_intra_species_ani": "98.81", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009764265.1", "gtdb_species": "s__Pseudomonas_E sp009764265", "ani": 87.4689, "matched_fragments": 1548, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.48", "min_intra_species_ani": "95.48", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001984065.1", "gtdb_species": "s__Pseudomonas_E sp001984065", "ani": 87.4466, "matched_fragments": 1484, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016909445.1", "gtdb_species": "s__Pseudomonas_E stutzeri_A", "ani": 87.4455, "matched_fragments": 1505, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.88", "min_intra_species_ani": "96.88", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.84", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004136015.1", "gtdb_species": "s__Pseudomonas_E sp004136015", "ani": 87.2424, "matched_fragments": 1506, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.14", "min_intra_species_ani": "95.84", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_013359595.1", "gtdb_species": "s__Pseudomonas_E sp013359595", "ani": 87.1289, "matched_fragments": 1519, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006438925.1", "gtdb_species": "s__Pseudomonas_E mandelii_C", "ani": 87.0957, "matched_fragments": 1539, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.98", "min_intra_species_ani": "96.81", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.83", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000968015.1", "gtdb_species": "s__Pseudomonas_E fluorescens_W", "ani": 87.0788, "matched_fragments": 1525, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.19", "min_intra_species_ani": "96.19", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003732265.1", "gtdb_species": "s__Pseudomonas_E brassicacearum_D", "ani": 86.8726, "matched_fragments": 1515, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017114915.1", "gtdb_species": "s__Pseudomonas_E frederiksbergensis_I", "ani": 86.6542, "matched_fragments": 1378, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001269805.1", "gtdb_species": "s__Pseudomonas_E sp001269805", "ani": 86.6178, "matched_fragments": 1493, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004006335.1", "gtdb_species": "s__Pseudomonas_E sp002112885", "ani": 86.0594, "matched_fragments": 1425, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.01", "min_intra_species_ani": "95.48", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.90", "num_clustered_genomes": 14, "status": "-" }, { "accession": "GCF_014863585.1", "gtdb_species": "s__Pseudomonas_E gozinkensis", "ani": 85.963, "matched_fragments": 1409, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001594225.2", "gtdb_species": "s__Pseudomonas_E glycinae", "ani": 85.84, "matched_fragments": 1391, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.56", "min_intra_species_ani": "95.98", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.88", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_007858275.1", "gtdb_species": "s__Pseudomonas_E proteolytica", "ani": 83.4448, "matched_fragments": 1135, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.69", "min_intra_species_ani": "98.38", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.86", "num_clustered_genomes": 19, "status": "-" }, { "accession": "GCF_015680235.1", "gtdb_species": "s__Pseudomonas_E guariconensis_A", "ani": 80.7589, "matched_fragments": 889, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.95", "min_intra_species_ani": "98.73", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_018449655.1", "gtdb_species": "s__Pseudomonas_E sp018449655", "ani": 80.5273, "matched_fragments": 829, "total_fragments": 2132, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.248, "cell_length": 0.186, "doubling_h": -0.025, "growth_tmp": 29.0, "optimum_tmp": 27.972, "optimum_ph": 7.258, "genome_size": 6546438.0, "gc_content": 60.938, "coding_genes": 5204.79, "rRNA16S_genes": 5.319, "tRNA_genes": 67.35, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.975, "range_salinity": 0.666, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 0.926, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.073, "bacillus_cell_shape": 0.988, "coccus_cell_shape": 0.011, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Pseudomonas", "moorei" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }