{ "type": "genome", "identifier": "GCF_008806995.1", "organism": "Neisseria animalis", "title": "Neisseria animalis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Illinois Institute of Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_008806995.1", "bioproject": "PRJNA224116", "biosample": "SAMN09853482", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "492", "species_taxid": "492", "organism_name": "Neisseria animalis", "infraspecific_name": "strain=ATCC 49930", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/10/03", "asm_name": "ASM880699v1", "asm_submitter": "Illinois Institute of Technology", "gbrs_paired_asm": "GCA_008806995.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/806/995/GCF_008806995.1_ASM880699v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2236930", "genome_size_ungapped": "2236930", "gc_percent": "52.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_008806995.1-RS_2024_04_27", "annotation_date": "2024-04-27", "total_gene_count": "2086", "protein_coding_gene_count": "1988", "non_coding_gene_count": "79", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-10-03", "dateModified": "2019-10-03", "datePublished": "2019-10-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Neisseria animalis" ], "sample_taxid": [ "492" ], "sample_host_organism": [ "Guinea pig" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: Hamburg" ], "sample_host_location_id": [], "data_size": "0.617 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2236930", "Number of Sequences": "1", "Longest Sequences (bp)": "2236930", "N50 (bp)": "2236930", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "51.9", "Number of CDSs": "1989", "Average Protein Length": "305.2", "Coding Ratio (%)": "81.4", "Number of rRNAs": "12", "Number of tRNAs": "63", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Neisseria animalis", "strain": "strain=ATCC 49930", "accession": "GCA_008806995.1", "taxid": 492, "species_taxid": 492, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 741, "total_fragments": 745, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Neisseria animalis", "strain": "strain=NCTC10212", "accession": "GCA_900636515.1", "taxid": 492, "species_taxid": 492, "relation_to_type": "type", "validated": true, "ani": 99.9978, "matched_fragments": 738, "total_fragments": 745, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Neisseria animalis", "strain": "strain=DSM 23392", "accession": "GCA_003795365.1", "taxid": 492, "species_taxid": 492, "relation_to_type": "type", "validated": true, "ani": 99.9588, "matched_fragments": 705, "total_fragments": 745, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Bergeriella denitrificans", "strain": "strain=NBRC 102155", "accession": "GCA_001592185.1", "taxid": 494, "species_taxid": 494, "relation_to_type": "type", "validated": true, "ani": 84.7424, "matched_fragments": 425, "total_fragments": 745, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bergeriella denitrificans", "strain": 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