{
    "type": "genome",
    "identifier": "GCF_008973485.1",
    "organism": "Psychrobacillus glaciei",
    "title": "Psychrobacillus glaciei",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Ajou University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_008973485.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN09708448",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "2283160",
        "species_taxid": "2283160",
        "organism_name": "Psychrobacillus glaciei",
        "infraspecific_name": "strain=PB01",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/10/04",
        "asm_name": "ASM897348v1",
        "asm_submitter": "Ajou University",
        "gbrs_paired_asm": "GCA_008973485.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/973/485/GCF_008973485.1_ASM897348v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4351338",
        "genome_size_ungapped": "4351338",
        "gc_percent": "36.000000",
        "replicon_count": "2",
        "scaffold_count": "2",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_008973485.1-RS_2024_11_18",
        "annotation_date": "2024-11-18",
        "total_gene_count": "4206",
        "protein_coding_gene_count": "4019",
        "non_coding_gene_count": "115",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-10-04",
    "dateModified": "2019-10-04",
    "datePublished": "2019-10-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Psychrobacillus glaciei"
        ],
        "sample_taxid": [
            "2283160"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Antarctica"
        ],
        "sample_host_location_id": [],
        "data_size": "1.216 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4351338",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "4332095",
        "N50 (bp)": "4332095",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.0",
        "Number of CDSs": "4208",
        "Average Protein Length": "275.7",
        "Coding Ratio (%)": "80.0",
        "Number of rRNAs": "33",
        "Number of tRNAs": "78",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Psychrobacillus glaciei",
                "strain": "strain=PB01",
                "accession": "GCA_008973485.1",
                "taxid": 2283160,
                "species_taxid": 2283160,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 1446,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Psychrobacillus vulpis",
                "strain": "strain=Z8",
                "accession": "GCA_006861825.1",
                "taxid": 2325572,
                "species_taxid": 2325572,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.8118,
                "matched_fragments": 678,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus soli",
                "strain": "strain=NHI-2",
                "accession": "GCA_006861775.1",
                "taxid": 1543965,
                "species_taxid": 1543965,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.1017,
                "matched_fragments": 570,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus lasiicapitis",
                "strain": "strain=NEAU-3TGS17",
                "accession": "GCA_006861795.1",
                "taxid": 1636719,
                "species_taxid": 1636719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.9812,
                "matched_fragments": 548,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus lasiicapitis",
                "strain": "strain=CGMCC 1.15308",
                "accession": "GCA_014641675.1",
                "taxid": 1636719,
                "species_taxid": 1636719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.9735,
                "matched_fragments": 562,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus insolitus",
                "strain": "strain=DSM 5",
                "accession": "GCA_003254155.1",
                "taxid": 1461,
                "species_taxid": 1461,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.5964,
                "matched_fragments": 444,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus psychrotolerans",
                "strain": "strain=DSM 11706",
                "accession": "GCA_900115805.1",
                "taxid": 126156,
                "species_taxid": 126156,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3994,
                "matched_fragments": 429,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solibacillus merdavium",
                "strain": "strain=Sa1YVA6",
                "accession": "GCA_014836935.1",
                "taxid": 2762218,
                "species_taxid": 2762218,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1985,
                "matched_fragments": 89,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solibacillus faecavium",
                "strain": "strain=A46",
                "accession": "GCA_014836905.1",
                "taxid": 2762221,
                "species_taxid": 2762221,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1624,
                "matched_fragments": 103,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lysinibacillus composti",
                "strain": "strain=MCCC 1A13240",
                "accession": "GCA_003856865.1",
                "taxid": 720633,
                "species_taxid": 720633,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0913,
                "matched_fragments": 138,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rummeliibacillus suwonensis",
                "strain": "strain=G20",
                "accession": "GCA_007896435.1",
                "taxid": 1306154,
                "species_taxid": 1306154,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8826,
                "matched_fragments": 111,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus salipaludis",
                "strain": "strain=WN066",
                "accession": "GCA_004358205.1",
                "taxid": 2547811,
                "species_taxid": 2547811,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8772,
                "matched_fragments": 81,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kurthia massiliensis",
                "strain": "strain=JC30",
                "accession": "GCA_000285555.1",
                "taxid": 1033739,
                "species_taxid": 1033739,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6296,
                "matched_fragments": 75,
                "total_fragments": 1450,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_008973485.1",
                "gtdb_species": "s__Psychrobacillus glaciei",
                "ani": 100.0,
                "matched_fragments": 1447,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_001278755.1",
                "gtdb_species": "s__Psychrobacillus sp001278755",
                "ani": 80.9975,
                "matched_fragments": 685,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.52",
                "min_intra_species_ani": "97.52",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_006861825.1",
                "gtdb_species": "s__Psychrobacillus vulpis",
                "ani": 80.817,
                "matched_fragments": 677,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_006861775.1",
                "gtdb_species": "s__Psychrobacillus soli",
                "ani": 80.1111,
                "matched_fragments": 569,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_018140925.1",
                "gtdb_species": "s__Psychrobacillus sp018140925",
                "ani": 80.011,
                "matched_fragments": 500,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900111345.1",
                "gtdb_species": "s__Psychrobacillus sp900111345",
                "ani": 79.9909,
                "matched_fragments": 585,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_006861795.1",
                "gtdb_species": "s__Psychrobacillus lasiicapitis",
                "ani": 79.9798,
                "matched_fragments": 547,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_007676755.1",
                "gtdb_species": "s__Psychrobacillus sp007676755",
                "ani": 79.9145,
                "matched_fragments": 577,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003254155.1",
                "gtdb_species": "s__Psychrobacillus insolitus",
                "ani": 79.5913,
                "matched_fragments": 444,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900114885.1",
                "gtdb_species": "s__Psychrobacillus psychrodurans",
                "ani": 79.5724,
                "matched_fragments": 467,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.67",
                "min_intra_species_ani": "97.67",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900115805.1",
                "gtdb_species": "s__Psychrobacillus psychrotolerans",
                "ani": 79.4037,
                "matched_fragments": 428,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007896435.1",
                "gtdb_species": "s__Rummeliibacillus suwonensis",
                "ani": 76.9009,
                "matched_fragments": 110,
                "total_fragments": 1450,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Rummeliibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.15",
                "min_intra_species_ani": "97.53",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.233,
        "cell_length": 0.268,
        "doubling_h": null,
        "growth_tmp": 23.833,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 3637616.333,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 1.0,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Psychrobacillus",
        "glaciei"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}