{
    "type": "genome",
    "identifier": "GCF_009192745.1",
    "organism": "Arthrobacter citreus",
    "title": "Arthrobacter citreus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Chinese Center for Disease Control and Prevention",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_009192745.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN12638718",
        "wgs_master": "VTFV00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1670",
        "species_taxid": "1670",
        "organism_name": "Arthrobacter citreus",
        "infraspecific_name": "strain=DSM 20133",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/10/21",
        "asm_name": "ASM919274v1",
        "asm_submitter": "Chinese Center for Disease Control and Prevention",
        "gbrs_paired_asm": "GCA_009192745.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/192/745/GCF_009192745.1_ASM919274v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3553729",
        "genome_size_ungapped": "3553729",
        "gc_percent": "65.500000",
        "replicon_count": "0",
        "scaffold_count": "13",
        "contig_count": "13",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_009192745.1-RS_2024_03_29",
        "annotation_date": "2024-03-29",
        "total_gene_count": "3322",
        "protein_coding_gene_count": "3244",
        "non_coding_gene_count": "62",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-10-21",
    "dateModified": "2019-10-21",
    "datePublished": "2019-10-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Arthrobacter citreus"
        ],
        "sample_taxid": [
            "1670"
        ],
        "sample_host_organism": [
            "chicken"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not collected"
        ],
        "sample_host_location_id": [],
        "data_size": "0.987 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3553729",
        "Number of Sequences": "13",
        "Longest Sequences (bp)": "1434066",
        "N50 (bp)": "651167",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.6",
        "Number of CDSs": "3285",
        "Average Protein Length": "327.8",
        "Coding Ratio (%)": "90.9",
        "Number of rRNAs": "6",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Arthrobacter citreus",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
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                "total_fragments": 1179,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Arthrobacter koreensis",
                "strain": "strain=DSM 16760",
                "accession": "GCA_009193255.1",
                "taxid": 199136,
                "species_taxid": 199136,
                "relation_to_type": "type",
                "validated": true,
                "ani": 88.2428,
                "matched_fragments": 1005,
                "total_fragments": 1179,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter pullicola",
                "strain": "strain=Sa2BUA2",
                "accession": "GCA_014836875.1",
                "taxid": 2762224,
                "species_taxid": 2762224,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Arthrobacter gallicola",
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                "species_taxid": 2762225,
                "relation_to_type": "type",
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                "matched_fragments": 761,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter luteolus",
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                "species_taxid": 98672,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.2215,
                "matched_fragments": 808,
                "total_fragments": 1179,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter luteolus",
                "strain": "strain=DSM 13067",
                "accession": "GCA_008973725.1",
                "taxid": 98672,
                "species_taxid": 98672,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.1399,
                "matched_fragments": 812,
                "total_fragments": 1179,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter jiangjiafuii",
                "strain": "strain=zg-ZUI227",
                "accession": "GCA_017898065.1",
                "taxid": 2817475,
                "species_taxid": 2817475,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.4729,
                "matched_fragments": 600,
                "total_fragments": 1179,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter sunyaminii",
                "strain": "strain=zg-ZUI122",
                "accession": "GCA_018866305.1",
                "taxid": 2816859,
                "species_taxid": 2816859,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.4589,
                "matched_fragments": 562,
                "total_fragments": 1179,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter jiangjiafuii",
                "strain": "strain=zg-ZUI227",
                "accession": "GCA_018622995.1",
                "taxid": 2817475,
                "species_taxid": 2817475,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.3983,
                "matched_fragments": 608,
                "total_fragments": 1179,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_009192745.1",
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                "matched_fragments": 1179,
                "total_fragments": 1179,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
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                "matched_fragments": 1003,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.08",
                "min_intra_species_ani": "99.08",
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                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
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            },
            {
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                "matched_fragments": 970,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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            {
                "accession": "GCF_001307035.1",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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    "_genome_taxon": [
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}