{
    "type": "genome",
    "identifier": "GCF_009192995.1",
    "organism": "Sulfurimonas indica",
    "title": "Sulfurimonas indica",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Third Institute of Oceanography, Ministry of Natural Resources of PR China",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_009192995.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10790772",
        "wgs_master": "SDID00000000.1",
        "refseq_category": "reference genome",
        "taxid": "2508707",
        "species_taxid": "2508707",
        "organism_name": "Sulfurimonas indica",
        "infraspecific_name": "strain=NW8N",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/10/21",
        "asm_name": "ASM919299v1",
        "asm_submitter": "Third Institute of Oceanography, Ministry of Natural Resources of PR China",
        "gbrs_paired_asm": "GCA_009192995.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/192/995/GCF_009192995.1_ASM919299v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2093483",
        "genome_size_ungapped": "2093483",
        "gc_percent": "37.000000",
        "replicon_count": "0",
        "scaffold_count": "52",
        "contig_count": "52",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_009192995.1-RS_2024_05_05",
        "annotation_date": "2024-05-05",
        "total_gene_count": "2189",
        "protein_coding_gene_count": "2135",
        "non_coding_gene_count": "41",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-10-21",
    "dateModified": "2019-10-21",
    "datePublished": "2019-10-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sulfurimonas indica"
        ],
        "sample_taxid": [
            "2508707"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Indian Ocean"
        ],
        "sample_host_location_id": [],
        "data_size": "0.589 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2093483",
        "Number of Sequences": "52",
        "Longest Sequences (bp)": "194355",
        "N50 (bp)": "108919",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.8",
        "Number of CDSs": "2116",
        "Average Protein Length": "304.1",
        "Coding Ratio (%)": "92.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Sulfurimonas paralvinellae",
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                "taxid": 317658,
                "species_taxid": 317658,
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                "status": "below_threshold"
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            {
                "organism_name": "Sulfurimonas autotrophica",
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                "species_taxid": 202747,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas sediminis",
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                "species_taxid": 2590020,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas hydrogeniphila",
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                "accession": "GCA_009068765.1",
                "taxid": 2509341,
                "species_taxid": 2509341,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3092,
                "matched_fragments": 260,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Candidatus Sulfurimonas marisnigri",
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                "accession": "GCA_015265475.1",
                "taxid": 2740405,
                "species_taxid": 2740405,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 135,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas lithotrophica",
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                "accession": "GCA_009258225.1",
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                "species_taxid": 2590022,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7185,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas hongkongensis",
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                "accession": "GCF_009192995.1",
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                "mean_intra_species_ani": "N/A",
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    "_bac2feature": {
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    "quality": 4,
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}