{ "type": "genome", "identifier": "GCF_009372255.1", "organism": "Acinetobacter guerrae", "title": "Acinetobacter guerrae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Gothenburg - CCUG", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009372255.1", "bioproject": "PRJNA224116", "biosample": "SAMN04924829", "wgs_master": "LXGN00000000.1", "refseq_category": "reference genome", "taxid": "1843371", "species_taxid": "1843371", "organism_name": "Acinetobacter guerrae", "infraspecific_name": "strain=AC 1271", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/10/28", "asm_name": "ASM937225v1", "asm_submitter": "University of Gothenburg - CCUG", "gbrs_paired_asm": "GCA_009372255.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/372/255/GCF_009372255.1_ASM937225v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3421735", "genome_size_ungapped": "3420736", "gc_percent": "39.000000", "replicon_count": "0", "scaffold_count": "60", "contig_count": "60", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009372255.1-RS_2024_04_03", "annotation_date": "2024-04-03", "total_gene_count": "3314", "protein_coding_gene_count": "3180", "non_coding_gene_count": "68", "pubmed_id": "32618559" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-10-28", "dateModified": "2019-10-28", "datePublished": "2019-10-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Acinetobacter guerrae" ], "sample_taxid": [ "1843371" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Portugal: Porto" ], "sample_host_location_id": [], "data_size": "0.970 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3421735", "Number of Sequences": "60", "Longest Sequences (bp)": "570152", "N50 (bp)": "360814", "Gap Ratio (%)": "0.029225", "GCcontent (%)": "39.2", "Number of CDSs": "3228", "Average Protein Length": "308.2", "Coding Ratio (%)": "87.2", "Number of rRNAs": "3", "Number of tRNAs": "60", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Acinetobacter guerrae", "strain": "strain=AC 1271", "accession": "GCA_009372255.1", "taxid": 1843371, "species_taxid": 1843371, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1121, "total_fragments": 1122, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter ursingii", "strain": "strain=FDAARGOS_1095", "accession": "GCA_016726205.1", "taxid": 108980, "species_taxid": 108980, "relation_to_type": "type", "validated": true, "ani": 88.5722, "matched_fragments": 905, "total_fragments": 1122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter ursingii", "strain": "strain=CIP 107286", "accession": "GCA_000368825.1", "taxid": 108980, "species_taxid": 108980, "relation_to_type": "type", "validated": true, "ani": 88.5231, "matched_fragments": 893, "total_fragments": 1122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter septicus", "strain": "strain=FDAARGOS_1401", "accession": "GCA_019355975.1", "taxid": 465797, "species_taxid": 465797, "relation_to_type": "type", "validated": true, "ani": 88.4899, "matched_fragments": 902, "total_fragments": 1122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter ihumii", "strain": "strain=Marseille-P8049", "accession": "GCA_900625095.1", "taxid": 2483802, "species_taxid": 2483802, "relation_to_type": "type", "validated": true, "ani": 83.8364, "matched_fragments": 810, "total_fragments": 1122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter oleivorans", "strain": "strain=KCTC 23045", "accession": "GCA_000836035.1", "taxid": 1148157, "species_taxid": 1148157, "relation_to_type": "suspected-type", "validated": true, "ani": 79.2366, "matched_fragments": 428, "total_fragments": 1122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter johnsonii", "strain": "strain=NCTC10308", "accession": "GCA_900444855.1", "taxid": 40214, "species_taxid": 40214, "relation_to_type": "suspected-type", "validated": true, "ani": 78.747, "matched_fragments": 356, "total_fragments": 1122, "ani_threshold": 95, "status": 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