# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_59	LOCUS_00590	sequence1:69089..71500(+)	partial			WP_015064530.1	AAA family ATPase	97.1	63.7	26.2
MGA_70	LOCUS_00700	sequence1:80114..81049(-)	partial			WP_011706602.1	signal transduction histidine-protein kinase/phosphatase UhpB	68.8	41.1	35.0
MGA_73	LOCUS_00730	sequence1:83425..83706(-)	frameshift		83689,83454	WP_200876229.1	IS5 family transposase	75.3	25.3	51.4
MGA_80	LOCUS_00800	sequence1:89880..90146(+)	frameshift		90140	WP_151062544.1	IS3 family transposase	98.9	23.1	83.9
MGA_81	LOCUS_00810	sequence1:90241..90579(+)	frameshift		90140	WP_151062544.1	IS3 family transposase	92.9	27.7	72.1
MGA_82	LOCUS_00820	sequence1:91109..91474(+)	frameshift,internal_stop_codon	90840..90842(+),91497..91499(+),91011..91013(+),91473..91475(+),90870..90872(+)	91145	WP_175897093.1	IS5 family transposase	88.4	39.6	62.6
MGA_86	LOCUS_00860	sequence1:95841..97043(-)	frameshift		97268,97085	WP_004550548.1	collagen-like triple helix repeat-containing protein	95.2	76.7	36.8
MGA_91	LOCUS_00910	sequence1:101326..102129(+)	partial			WP_004195769.1	cation diffusion facilitator family transporter	94.0	63.4	65.4
MGA_94	LOCUS_00940	sequence1:104299..104766(+)	partial			WP_004553005.1	septal ring lytic transglycosylase RlpA family protein	81.9	60.2	65.4
MGA_100	LOCUS_01000	sequence1:108524..108784(+)	partial			WP_015038855.1	conjugal transfer protein TraG N-terminal domain-containing protein	60.5	10.2	73.1
MGA_101	LOCUS_01010	sequence1:108708..109544(-)	frameshift		109543	WP_167691470.1	IS3 family transposase	96.4	73.2	62.8
MGA_102	LOCUS_01020	sequence1:109541..109807(-)	frameshift		109543	WP_086025310.1	IS3-like element ISYpe1 family transposase	98.9	23.8	82.8
MGA_114	LOCUS_01140	sequence1:121480..121830(+)	partial			WP_003107600.1	DUF3304 domain-containing protein	91.4	70.1	33.6
MGA_116	LOCUS_01160	sequence1:122239..123756(+)	partial			WP_004536040.1	DUF2235 domain-containing protein	67.3	46.5	34.0
MGA_129	LOCUS_01290	sequence1:140556..141035(+)	partial			WP_004193573.1	response regulator transcription factor	90.6	61.1	51.4
MGA_139	LOCUS_01390	sequence1:150785..151210(-)	partial			WP_004198059.1	nitroreductase family protein	100.0	70.1	73.0
MGA_140	LOCUS_01400	sequence1:151878..152804(+)	partial			WP_011389739.1	Abi family protein	59.4	72.4	27.3
MGA_147	LOCUS_01470	sequence1:159857..161836(+)	partial			WP_001035991.1	M66 family metalloprotease	71.8	36.4	24.8
MGA_178	LOCUS_01780	sequence1:198542..199327(+)	frameshift,internal_stop_codon	199326..199328(+),198378..198380(+)	198485	WP_012904641.1	IS4-like element ISCro3 family transposase	100.0	58.4	40.1
MGA_185	LOCUS_01850	sequence1:202326..203507(-)	partial			WP_050298438.1	contact-dependent inhibition toxin CdiA	41.2	9.0	29.6
MGA_189	LOCUS_01890	sequence1:204495..207335(-)	partial			WP_011205723.1	hemagglutinin repeat-containing protein	79.3	24.3	44.5
MGA_191	LOCUS_01910	sequence1:207707..208447(-)	partial			WP_010895621.1	two-partner secretion system exoprotein TpsA1	58.9	3.0	32.3
MGA_208	LOCUS_02080	sequence1:233134..233628(-)	partial			WP_004196808.1	GspH/FimT family pseudopilin	90.2	74.4	75.7
MGA_242	LOCUS_02420	sequence1:269472..270317(+)	frameshift		270074	WP_004195809.1	branched-chain amino acid ABC transporter permease	71.5	62.0	66.7
MGA_243	LOCUS_02430	sequence1:270205..270450(+)	frameshift		270074	WP_004195809.1	branched-chain amino acid ABC transporter permease	97.5	24.4	77.2
MGA_284	LOCUS_02840	sequence1:326221..329886(+)	partial			WP_024696519.1	calcium-binding protein	43.2	74.4	30.3
MGA_290	LOCUS_02900	sequence1:338271..342917(+)	partial			WP_011176663.1	AAA domain-containing protein	34.8	44.6	28.5
MGA_296	LOCUS_02960	sequence1:348704..350533(+)	partial			WP_010918008.1	tetratricopeptide repeat protein	92.3	74.7	43.3
MGA_309	LOCUS_03090	sequence1:365294..365473(+)	frameshift		365422	WP_004198197.1	flagellar motor stator protein MotA	72.9	15.0	90.7
MGA_310	LOCUS_03100	sequence1:365443..366153(+)	frameshift		365422	WP_004198197.1	flagellar motor stator protein MotA	100.0	82.5	91.1
MGA_347	LOCUS_03470	sequence1:402497..403171(+)	partial			WP_011205723.1	hemagglutinin repeat-containing protein	64.7	4.7	60.0
MGA_350	LOCUS_03500	sequence1:404460..404585(+)	internal_stop_codon	404583..404585(+)		WP_028578677.1	transposase	100.0	48.8	82.9
MGA_352	LOCUS_03520	sequence1:404948..405301(+)	internal_stop_codon	404906..404908(+),405299..405301(+)		WP_003112560.1	IS3 family transposase	86.3	36.1	35.6
MGA_353	LOCUS_03530	sequence1:405857..406141(+)	frameshift		405624	WP_013095381.1	IS3 family transposase	83.0	20.9	57.7
MGA_354	LOCUS_03540	sequence1:406326..406616(-)	frameshift		406538,406445	WP_175897093.1	IS5 family transposase	76.0	27.0	45.2
MGA_355	LOCUS_03550	sequence1:406707..407426(-)	partial			WP_004188558.1	dimethyl sulfoxide reductase anchor subunit	98.3	74.4	66.8
MGA_381	LOCUS_03810	sequence1:439378..440883(-)	partial			WP_011204776.1	flagellar hook-length control protein FliK	59.9	59.7	42.5
MGA_393	LOCUS_03930	sequence1:451840..452892(+)	frameshift		451612	WP_004197171.1	flagellar hook-length control protein FliK	98.9	69.7	37.2
MGA_413	LOCUS_04130	sequence1:477385..477744(+)	partial			WP_004197230.1	winged helix DNA-binding protein	100.0	70.0	80.7
MGA_425	LOCUS_04250	sequence1:489804..490193(-)	partial			WP_004188983.1	copper-binding protein	54.3	61.9	62.9
MGA_429	LOCUS_04290	sequence1:496338..496607(-)	partial			WP_004197846.1	hypothetical protein	97.8	54.8	48.4
MGA_441	LOCUS_04410	sequence1:510582..511079(+)	frameshift		510538	WP_011704956.1	response regulator	93.9	72.2	46.5
MGA_459	LOCUS_04570	sequence1:535471..535842(+)	partial			WP_004198366.1	50S ribosomal protein L7/L12	74.8	75.0	71.0
MGA_524	LOCUS_05220	sequence1:602421..603794(+)	partial			WP_004550963.1	hypothetical protein	52.3	79.1	28.5
MGA_530	LOCUS_05280	sequence1:608727..610088(+)	partial			WP_011205266.1	thiamine phosphate synthase	66.0	80.8	57.9
MGA_674	LOCUS_06700	sequence1:764794..765264(-)	partial			WP_004530902.1	rRNA maturation RNase YbeY	98.1	55.9	58.1
MGA_696	LOCUS_06920	sequence1:787153..787359(+)	partial			WP_004186307.1	hypothetical protein	75.0	71.6	72.5
MGA_699	LOCUS_06950	sequence1:790705..792183(+)	partial			WP_011817208.1	hypothetical protein	96.5	67.7	39.0
MGA_713	LOCUS_07090	sequence1:811177..811527(-)	partial			WP_002211447.1	flagellar motor switch protein FliN	75.0	63.5	50.6
MGA_736	LOCUS_07320	sequence1:833539..834303(+)	partial			WP_004197262.1	flagellar assembly peptidoglycan hydrolase FlgJ	76.8	62.7	41.5
MGA_737	LOCUS_07330	sequence1:835025..835774(-)	partial			WP_015445553.1	flagellar basal body P-ring formation chaperone FlgA	31.7	46.7	40.5
MGA_761	LOCUS_07570	sequence1:860046..861176(+)	partial			WP_004196469.1	capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family	94.4	68.9	42.8
MGA_776	LOCUS_07720	sequence1:874963..883740(+)	frameshift		883710	WP_004194140.1	type I polyketide synthase	46.4	47.5	50.0
MGA_791	LOCUS_07870	sequence1:899751..900758(-)	partial			WP_004186617.1	cell envelope integrity protein TolA	39.7	39.3	55.2
MGA_817	LOCUS_08130	sequence1:923768..925105(+)	partial			WP_000775015.1	glycine betaine/L-proline ABC transporter permease ProW	61.6	77.4	42.0
MGA_837	LOCUS_08330	sequence1:959210..961438(+)	frameshift		961342	WP_004522221.1	xanthine dehydrogenase molybdopterin binding subunit	64.6	60.9	75.4
MGA_838	LOCUS_08340	sequence1:961583..962224(+)	partial			WP_004189595.1	xanthine dehydrogenase accessory protein XdhC	81.2	52.6	54.1
MGA_856	LOCUS_08520	sequence1:983509..984039(+)	partial			WP_004194782.1	NAD-binding protein	99.4	48.7	70.9
MGA_862	LOCUS_08580	sequence1:989933..990139(+)	partial			WP_004186423.1	YkgJ family cysteine cluster protein	91.2	56.9	66.1
MGA_868	LOCUS_08640	sequence1:995574..996530(-)	partial			WP_004527571.1	DUF2520 domain-containing protein	90.3	73.5	56.1
MGA_895	LOCUS_08910	sequence1:1030259..1031095(-)	frameshift		1031094	WP_167691470.1	IS3 family transposase	96.4	73.2	62.8
MGA_896	LOCUS_08920	sequence1:1031092..1031358(-)	frameshift		1031094	WP_086025310.1	IS3-like element ISYpe1 family transposase	98.9	23.8	82.8
MGA_900	LOCUS_08960	sequence1:1036856..1037416(+)	partial			WP_004200414.1	GNAT family N-acetyltransferase	88.7	62.7	51.5
MGA_925	LOCUS_09210	sequence1:1064387..1064923(-)	partial			WP_004529637.1	fimbrial protein	75.8	70.0	37.8
MGA_939	LOCUS_09350	sequence1:1082631..1083800(+)	partial			WP_004189943.1	gamma-glutamyl-gamma-aminobutyrate hydrolase	84.1	73.6	82.0
MGA_965	LOCUS_09600	sequence1:1115896..1116831(+)	frameshift		1116810,1116843	WP_102804916.1	3-phosphoshikimate 1-carboxyvinyltransferase	96.1	39.6	74.6
MGA_966	LOCUS_09610	sequence1:1116850..1118160(+)	frameshift		1116810,1116843	WP_004188897.1	3-phosphoshikimate 1-carboxyvinyltransferase	99.3	57.5	82.2
MGA_975	LOCUS_09700	sequence1:1126537..1126878(+)	partial			WP_004189725.1	helix-hairpin-helix domain-containing protein	69.0	74.3	69.2
MGA_977	LOCUS_09720	sequence1:1128203..1129309(-)	frameshift		1129317	WP_024901052.1	lytic murein transglycosylase B	93.2	78.9	76.4
MGA_1009	LOCUS_10040	sequence1:1160032..1161423(-)	partial			WP_003113480.1	hypothetical protein	28.3	42.9	35.4
MGA_1010	LOCUS_10050	sequence1:1161450..1162082(-)	partial			WP_172644488.1	hypothetical protein	55.2	28.6	39.7
MGA_1026	LOCUS_10210	sequence1:1182110..1183921(-)	partial			WP_010942194.1	tetratricopeptide repeat protein	61.7	79.7	36.4
MGA_1030	LOCUS_10250	sequence1:1186542..1187252(+)	partial			WP_011021891.1	pentapeptide repeat-containing protein	74.6	27.9	33.5
MGA_1040	LOCUS_10350	sequence1:1199425..1200738(+)	partial			WP_011205105.1	branched-chain amino acid ABC transporter ATP-binding protein/permease	92.4	51.8	47.4
MGA_1041	LOCUS_10360	sequence1:1200735..1201487(+)	partial			WP_011205105.1	branched-chain amino acid ABC transporter ATP-binding protein/permease	98.0	31.6	59.8
MGA_1070	LOCUS_10630	sequence1:1241193..1241432(-)	internal_stop_codon	1241193..1241195(-)		WP_077627724.1	type II toxin-antitoxin system antitoxin HicB	100.0	56.5	46.8
MGA_1075	LOCUS_10680	sequence1:1243423..1243776(-)	frameshift,internal_stop_codon	1243423..1243425(-),1243816..1243818(-)	1243353	WP_003112560.1	IS3 family transposase	86.3	36.1	35.6
MGA_1077	LOCUS_10700	sequence1:1244139..1244264(-)	internal_stop_codon	1244139..1244141(-)		WP_028578677.1	transposase	100.0	48.8	82.9
MGA_1095	LOCUS_10880	sequence1:1262205..1262498(-)	partial			WP_004530728.1	energy transducer TonB	100.0	39.1	55.7
MGA_1104	LOCUS_10970	sequence1:1273222..1273596(-)	partial			WP_004547951.1	DUF4212 domain-containing protein	75.0	73.8	57.0
MGA_1106	LOCUS_10990	sequence1:1274081..1274647(+)	partial			WP_015704112.1	phosphatase PAP2 family protein	96.3	74.8	70.2
MGA_1146	LOCUS_11390	sequence1:1321878..1322153(+)	partial			WP_013095381.1	IS3 family transposase	82.4	20.1	57.3
MGA_1155	LOCUS_11480	sequence1:1327626..1329614(+)	partial			WP_163682802.1	AAA family ATPase	48.0	45.2	34.8
MGA_1171	LOCUS_11640	sequence1:1343589..1344491(-)	frameshift		1344612	WP_004199566.1	peptide chain release factor 2	100.0	81.7	87.0
MGA_1184	LOCUS_11770	sequence1:1360651..1361067(-)	partial			WP_004533974.1	lipoprotein	53.6	61.7	48.6
MGA_1211	LOCUS_12040	sequence1:1386441..1386632(+)	partial			WP_004193501.1	DUF2065 domain-containing protein	71.4	71.4	80.0
MGA_1217	LOCUS_12100	sequence1:1395122..1395661(+)	frameshift		1394889	WP_004192110.1	lipoprotein	88.3	52.2	50.6
MGA_1259	LOCUS_12520	sequence1:1442964..1445507(-)	partial			WP_004534567.1	FUSC family membrane protein	68.6	76.6	78.7
MGA_1262	LOCUS_12550	sequence1:1452934..1455108(+)	partial			WP_011204978.1	AAA family ATPase	62.4	48.0	52.8
MGA_1270	LOCUS_12630	sequence1:1460149..1461087(+)	partial			WP_004555916.1	SMC-Scp complex subunit ScpB	80.1	58.7	64.8
MGA_1271	LOCUS_12640	sequence1:1461676..1462971(+)	partial			WP_004521674.1	pseudouridine synthase	70.3	54.9	88.5
MGA_1292	LOCUS_12850	sequence1:1490893..1491276(+)	partial			WP_004191084.1	prepilin peptidase	95.3	72.9	57.9
MGA_1301	LOCUS_12940	sequence1:1499089..1500174(+)	partial			WP_004192483.1	pilus assembly protein	59.3	69.5	65.7
MGA_1302	LOCUS_12950	sequence1:1500243..1500818(+)	partial			WP_011205093.1	DUF3613 domain-containing protein	45.0	65.6	46.7
MGA_1315	LOCUS_13080	sequence1:1516107..1516511(-)	partial			WP_004192580.1	DUF2069 domain-containing protein	76.9	68.5	68.9
MGA_1325	LOCUS_13180	sequence1:1527295..1528005(-)	frameshift		1527911	WP_003113379.1	class I SAM-dependent methyltransferase	78.8	69.1	69.9
MGA_1344	LOCUS_13370	sequence1:1547460..1548164(+)	partial			WP_011074020.1	beta-ketoacyl synthase chain length factor	59.4	53.7	36.7
MGA_1348	LOCUS_13410	sequence1:1549592..1550191(+)	partial			WP_014208348.1	septation protein IspZ	69.3	77.8	41.3
MGA_1353	LOCUS_13460	sequence1:1554365..1555084(+)	partial			WP_011074030.1	outer membrane lipoprotein carrier protein LolA	74.9	70.7	29.6
MGA_1372	LOCUS_13650	sequence1:1579808..1581736(+)	partial			WP_002211932.1	M23 family metallopeptidase	94.9	71.5	27.0
MGA_1373	LOCUS_13660	sequence1:1581791..1582264(+)	internal_stop_codon	1581734..1581736(+)		WP_002211929.1	M23 family metallopeptidase	98.7	20.2	48.8
MGA_1374	LOCUS_13670	sequence1:1582221..1582901(+)	partial			WP_002228051.1	hypothetical protein	61.5	56.2	30.3
MGA_1375	LOCUS_13680	sequence1:1582940..1585045(+)	partial			WP_002211936.1	type VI secretion system membrane subunit	40.8	21.1	39.9
MGA_1382	LOCUS_13750	sequence1:1593198..1593974(+)	partial			WP_004192839.1	HutD family protein	70.9	84.9	52.9
MGA_1457	LOCUS_14500	sequence1:1672491..1673072(-)	partial			WP_004193483.1	group III truncated hemoglobin	72.0	77.2	72.7
MGA_1462	LOCUS_14550	sequence1:1678648..1679211(-)	partial			WP_004531393.1	helix-hairpin-helix domain-containing protein	43.3	40.1	74.1
MGA_1497	LOCUS_14900	sequence1:1715964..1716389(+)	partial			WP_004527147.1	hypothetical protein	100.0	69.9	61.0
MGA_1500	LOCUS_14930	sequence1:1719051..1722611(+)	partial			WP_003113036.1	GLUG motif-containing protein	51.7	57.0	29.1
MGA_1503	LOCUS_14960	sequence1:1725603..1727912(+)	partial			WP_004521357.1	AsmA family protein	63.3	59.5	72.9
MGA_1525	LOCUS_15180	sequence1:1755100..1759866(-)	partial			WP_000052484.1	Ig-like domain-containing protein	87.7	20.4	26.3
MGA_1565	LOCUS_15580	sequence1:1803437..1803844(+)	partial			WP_017844286.1	BON domain-containing protein	58.5	46.5	51.9
MGA_1581	LOCUS_15740	sequence1:1822942..1824909(-)	partial			WP_000791251.1	putative Ig domain-containing protein	68.9	51.2	25.3
MGA_1591	LOCUS_15840	sequence1:1833921..1834460(+)	partial			WP_004544449.1	Spy/CpxP family protein refolding chaperone	62.0	67.8	58.6
MGA_1598	LOCUS_15910	sequence1:1838268..1839254(+)	partial			WP_046463327.1	alpha/beta fold hydrolase	32.3	28.7	31.1
MGA_1599	LOCUS_15920	sequence1:1839316..1840740(+)	partial			WP_214443067.1	phospholipase D family protein	76.2	71.2	28.5
MGA_1605	LOCUS_15980	sequence1:1850331..1851941(+)	partial			WP_004193466.1	efflux transporter outer membrane subunit	85.8	72.7	59.9
MGA_1613	LOCUS_16060	sequence1:1866388..1867035(+)	partial			WP_002222440.1	hemagglutinin repeat-containing protein	79.1	7.5	31.2
MGA_1662	LOCUS_16550	sequence1:1919437..1919793(+)	frameshift,internal_stop_codon	1920059..1920061(+),1919849..1919851(+)	1919688	WP_164925630.1	IS3-like element ISSod2 family transposase	80.5	26.5	75.8
MGA_1663	LOCUS_16560	sequence1:1920065..1920313(+)	internal_stop_codon	1920059..1920061(+),1920311..1920313(+),1919849..1919851(+)		WP_164925630.1	IS3-like element ISSod2 family transposase	100.0	22.9	56.1
MGA_1671	LOCUS_16640	sequence1:1931490..1938461(-)	frameshift		1938529,1936353,1938532,1938469,1938436,1934187,1938475,1934260,1938517,1936405,1938490,1938460	WP_104543246.1	autotransporter-associated beta strand repeat-containing protein	77.2	47.3	29.4
MGA_1672	LOCUS_16650	sequence1:1938422..1942576(-)	frameshift,internal_stop_codon	1938643..1938645(-)	1938469,1938535,1938538,1938475,1938667,1938516,1938552,1938490,1938523,1938526,1938463	WP_104543246.1	autotransporter-associated beta strand repeat-containing protein	92.4	35.0	34.8
MGA_1673	LOCUS_16660	sequence1:1943393..1944166(-)	partial			WP_004188530.1	type VI secretion system protein TssL, long form	79.8	49.2	37.2
MGA_1681	LOCUS_16740	sequence1:1952988..1953488(-)	frameshift		1953553	WP_003110747.1	GMC family oxidoreductase	98.8	27.7	62.8
MGA_1682	LOCUS_16750	sequence1:1953485..1954765(-)	frameshift		1953565	WP_003110747.1	GMC family oxidoreductase	93.4	67.3	61.1
MGA_1697	LOCUS_16900	sequence1:1968737..1969036(-)	partial			WP_004557171.1	GlxA family transcriptional regulator	97.0	27.8	74.0
MGA_1698	LOCUS_16910	sequence1:1969517..1970245(+)	partial			WP_164925630.1	IS3-like element ISSod2 family transposase	47.9	32.4	54.3
MGA_1701	LOCUS_16940	sequence1:1972929..1973234(-)	frameshift		1972891,1972973	WP_191862854.1	IS5 family transposase	83.2	44.5	42.9
MGA_1732	LOCUS_17250	sequence1:2006525..2007277(+)	partial			WP_152757444.1	pseudouridine synthase	99.6	36.1	81.1
MGA_1745	LOCUS_17380	sequence1:2023845..2024747(+)	frameshift		2024603	WP_004531442.1	ATP-binding cassette domain-containing protein	84.7	39.3	74.8
MGA_1746	LOCUS_17390	sequence1:2024683..2025789(+)	frameshift		2024606	WP_004531442.1	ATP-binding cassette domain-containing protein	100.0	56.8	76.7
MGA_1752	LOCUS_17450	sequence1:2032240..2033241(-)	partial			WP_011807735.1	uracil-DNA glycosylase	91.6	71.2	55.6
MGA_1768	LOCUS_17600	sequence1:2048005..2048448(-)	partial			WP_004193992.1	C40 family peptidase	97.3	61.5	91.7
MGA_1779	LOCUS_17710	sequence1:2062935..2063093(-)	frameshift,internal_stop_codon	2062935..2062937(-)	2062728,2062819,2062823	WP_011026834.1	IS5 family transposase	75.0	13.8	59.0
MGA_1784	LOCUS_17760	sequence1:2066837..2069815(-)	partial			WP_010980816.1	iron-regulated protein FrpA	84.7	60.7	19.9
MGA_1793	LOCUS_17850	sequence1:2078564..2079832(+)	partial			WP_003243737.1	serine hydrolase	74.9	66.3	23.6
MGA_1796	LOCUS_17880	sequence1:2085666..2086370(-)	partial			WP_004184888.1	type VI secretion system protein TssL	43.6	46.2	46.1
MGA_1798	LOCUS_17900	sequence1:2088231..2089196(-)	partial			WP_004200965.1	type VI secretion system lipoprotein TssJ	57.0	69.1	32.8
MGA_1801	LOCUS_17930	sequence1:2090641..2091648(-)	frameshift		2091658	WP_010932723.1	pentapeptide repeat-containing protein	75.5	43.4	30.4
MGA_1802	LOCUS_17940	sequence1:2091641..2094277(-)	partial			WP_011339336.1	DUF2169 domain-containing protein	26.8	67.9	30.1
MGA_1803	LOCUS_17950	sequence1:2094439..2096904(-)	partial			WP_004184913.1	type VI secretion system tip protein TssI/VgrG	69.5	55.7	38.1
MGA_1813	LOCUS_18050	sequence1:2109805..2110599(-)	partial			WP_011393114.1	lytic transglycosylase domain-containing protein	47.0	55.3	50.8
MGA_1821	LOCUS_18130	sequence1:2119002..2119610(+)	partial			WP_004568102.1	SycD/LcrH family type III secretion system chaperone BcrH1	63.9	79.5	36.4
MGA_1835	LOCUS_18270	sequence1:2131072..2131344(+)	partial			WP_005464497.1	SctS family type III secretion system export apparatus subunit VscS	74.4	76.1	47.8
MGA_1849	LOCUS_18410	sequence1:2145980..2148028(+)	partial			WP_011203082.1	SpoIIE family protein phosphatase	36.8	65.8	39.1
MGA_1865	LOCUS_18570	sequence1:2164662..2166527(-)	partial			WP_001166955.1	SPI-1 type III secretion system effector inositol phosphate phosphatase SopB	70.7	66.8	22.7
MGA_1881	LOCUS_18730	sequence1:2181249..2181776(-)	partial			WP_011036426.1	HrpB1 family type III secretion system apparatus protein	65.1	73.5	30.7
MGA_1885	LOCUS_18770	sequence1:2185908..2187161(+)	partial			WP_024900364.1	type III secretion system cytoplasmic ring protein SctQ	60.4	64.1	31.8
MGA_1888	LOCUS_18800	sequence1:2188106..2188591(+)	frameshift		2188552	WP_011036419.1	HrpD5 family protein	93.2	45.4	41.3
MGA_1893	LOCUS_18850	sequence1:2190087..2192567(+)	partial			WP_011326099.1	hypothetical protein	34.1	69.2	38.7
MGA_1919	LOCUS_19110	sequence1:2222998..2223459(-)	partial			WP_014207181.1	heme-binding protein	75.2	74.2	41.7
MGA_1927	LOCUS_19190	sequence1:2229932..2230123(-)	partial			WP_044233954.1	IS5 family transposase	74.6	17.5	72.3
MGA_1930	LOCUS_19220	sequence1:2232625..2232945(+)	frameshift		2232924	WP_077627724.1	type II toxin-antitoxin system antitoxin HicB	95.3	72.5	44.6
MGA_1933	LOCUS_19250	sequence1:2236087..2236776(+)	frameshift		2236635,2236061	WP_012257125.1	IS5 family transposase	79.9	68.3	61.2
MGA_1956	LOCUS_19480	sequence1:2260536..2261111(+)	partial			WP_004192043.1	periplasmic heavy metal sensor	60.2	63.5	57.4
MGA_1962	LOCUS_19540	sequence1:2266350..2267363(+)	partial			WP_011021891.1	pentapeptide repeat-containing protein	29.7	17.1	45.5
MGA_1968	LOCUS_19600	sequence1:2274035..2274358(+)	partial			WP_004199405.1	GIY-YIG nuclease family protein	97.2	35.9	67.3
MGA_2013	LOCUS_20050	sequence1:2321066..2321251(-)	partial			WP_004549899.1	ogr/Delta-like zinc finger family protein	100.0	74.4	86.9
MGA_2026	LOCUS_20180	sequence1:2329915..2330322(-)	partial			WP_004531064.1	phage tail assembly protein	70.4	83.3	73.7
MGA_2030	LOCUS_20220	sequence1:2332779..2334608(-)	partial			WP_113044952.1	phage tail protein	66.7	60.9	45.8
MGA_2053	LOCUS_20450	sequence1:2350985..2351206(-)	partial			WP_153075767.1	helix-turn-helix transcriptional regulator	67.1	31.6	69.4
MGA_2055	LOCUS_20470	sequence1:2352481..2352804(+)	partial			WP_004524465.1	Bro-N domain-containing protein	84.1	49.7	45.6
MGA_2062	LOCUS_20540	sequence1:2360798..2361310(+)	partial			WP_004197654.1	SCO family protein	100.0	73.7	69.6
MGA_2100	LOCUS_20920	sequence1:2397140..2400211(+)	partial			WP_004192715.1	Rne/Rng family ribonuclease	58.1	55.0	88.6
MGA_2115	LOCUS_21060	sequence1:2412458..2413192(+)	partial			WP_005461994.1	AzlC family ABC transporter permease	72.1	72.9	41.5
MGA_2159	LOCUS_21500	sequence1:2461091..2461570(-)	partial			WP_004193769.1	DUF2486 family protein	73.6	44.5	44.9
MGA_2165	LOCUS_21560	sequence1:2466529..2467236(-)	frameshift		2467244	WP_004527983.1	alpha/beta fold hydrolase	97.9	84.2	73.5
MGA_2197	LOCUS_21880	sequence1:2502578..2506087(-)	partial			WP_223375645.1	rhamnan synthesis F family protein	26.6	44.6	33.4
MGA_2273	LOCUS_22640	sequence1:2586434..2587957(-)	partial			WP_158707352.1	calcium-binding protein	42.0	12.2	39.0
MGA_2276	LOCUS_22670	sequence1:2590924..2591982(-)	partial			WP_158707352.1	calcium-binding protein	63.9	14.0	29.8
MGA_2289	LOCUS_22800	sequence1:2607226..2610462(+)	partial			WP_001033293.1	YadA-like family protein	91.8	59.5	26.3
MGA_2304	LOCUS_22950	sequence1:2632732..2633481(+)	frameshift		2633286	WP_004190177.1	ornithine carbamoyltransferase	75.1	60.5	90.9
MGA_2305	LOCUS_22960	sequence1:2633412..2633660(+)	frameshift		2633292	WP_004190177.1	ornithine carbamoyltransferase	100.0	26.5	87.8
MGA_2317	LOCUS_23080	sequence1:2643335..2643745(+)	partial			WP_004189096.1	bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE/phosphotransferase	97.8	71.2	78.2
MGA_2345	LOCUS_23360	sequence1:2675437..2675943(-)	partial			WP_004526225.1	carboxypeptidase-like regulatory domain-containing protein	67.3	80.7	56.6
MGA_2373	LOCUS_23640	sequence1:2706424..2706849(-)	partial			WP_004198682.1	recombination regulator RecX	99.3	42.8	59.3
MGA_2407	LOCUS_23980	sequence1:2749662..2750918(+)	frameshift		2750858	WP_004194084.1	metalloprotease TldD	96.2	82.5	87.6
MGA_2408	LOCUS_23990	sequence1:2750867..2751127(+)	frameshift		2750858	WP_004194084.1	metalloprotease TldD	100.0	17.3	93.0
MGA_2470	LOCUS_24610	sequence1:2817022..2819595(+)	partial			WP_129197795.1	fimbria/pilus outer membrane usher protein	74.3	73.0	31.2
MGA_2474	LOCUS_24650	sequence1:2823589..2824452(-)	partial			WP_004535264.1	DUF3025 domain-containing protein	92.3	71.2	63.4
MGA_2527	LOCUS_25180	sequence1:2880818..2881597(-)	partial			WP_004195104.1	histone H1-like DNA-binding protein	10.0	17.4	92.3
MGA_2535	LOCUS_25260	sequence1:2893162..2893824(+)	partial			WP_004194263.1	RNA pyrophosphohydrolase	74.5	75.9	91.5
MGA_2555	LOCUS_25460	sequence1:2909138..2911159(-)	partial			WP_011103425.1	relaxase/mobilization nuclease domain-containing protein	77.6	66.7	39.6
MGA_2556	LOCUS_25470	sequence1:2911162..2911362(-)	partial			WP_011103424.1	plasmid mobilization protein MobA	97.0	66.3	58.0
MGA_2562	LOCUS_25530	sequence1:2917375..2917659(+)	partial			WP_059232860.1	IS256 family transposase	96.8	22.7	51.0
MGA_2626	LOCUS_26170	sequence1:2986036..2986173(+)	partial			WP_004550904.1	cytochrome bd-I oxidase subunit CydX	60.0	84.4	92.6
MGA_2664	LOCUS_26550	sequence1:3025383..3025985(-)	partial			WP_004198027.1	hypothetical protein	83.5	67.7	50.3
MGA_2670	LOCUS_26610	sequence1:3034393..3035157(+)	partial			WP_164928438.1	VCBS repeat-containing protein	26.8	10.3	48.6
MGA_2686	LOCUS_26770	sequence1:3054007..3054165(+)	partial			WP_111336119.1	IS3 family transposase	92.3	12.2	64.6
MGA_2689	LOCUS_26800	sequence1:3054839..3055675(-)	frameshift		3055674	WP_167691470.1	IS3 family transposase	96.4	73.2	62.8
MGA_2690	LOCUS_26810	sequence1:3055672..3055938(-)	frameshift		3055674	WP_086025310.1	IS3-like element ISYpe1 family transposase	98.9	23.8	82.8
MGA_2694	LOCUS_26850	sequence1:3066104..3066613(+)	internal_stop_codon	3066611..3066613(+)		WP_004195013.1	3-keto-5-aminohexanoate cleavage protein	82.8	45.2	71.4
MGA_2697	LOCUS_26880	sequence1:3067883..3068506(+)	partial			WP_003399853.1	alanyl-tRNA editing protein	95.2	74.9	45.2
MGA_2704	LOCUS_26950	sequence1:3075400..3076233(-)	partial			WP_011338976.1	hypothetical protein	71.8	64.8	34.8
MGA_2708	LOCUS_26990	sequence1:3079600..3080922(+)	partial			WP_011831989.1	MFS transporter	93.6	55.0	50.2
MGA_2720	LOCUS_27110	sequence1:3095621..3097564(+)	partial			WP_000791251.1	putative Ig domain-containing protein	81.9	58.3	27.4
MGA_2740	LOCUS_27310	sequence1:3116597..3116836(+)	partial			WP_004556691.1	hypothetical protein	100.0	58.6	52.4
MGA_2741	LOCUS_27320	sequence1:3117159..3117284(+)	frameshift,internal_stop_codon	3117282..3117284(+)	3117374	WP_028578677.1	transposase	100.0	48.8	82.9
MGA_2742	LOCUS_27330	sequence1:3117646..3117999(+)	internal_stop_codon	3117997..3117999(+),3117604..3117606(+)		WP_003112560.1	IS3 family transposase	86.3	36.1	36.6
MGA_2743	LOCUS_27340	sequence1:3119210..3120049(-)	partial			WP_015704292.1	VENN motif pre-toxin domain-containing protein	60.9	36.1	30.3
MGA_2744	LOCUS_27350	sequence1:3120070..3122967(-)	partial			WP_011205723.1	hemagglutinin repeat-containing protein	89.9	30.1	41.4
MGA_2750	LOCUS_27410	sequence1:3126936..3127730(-)	partial			WP_004536085.1	hypothetical protein	72.3	74.9	40.5
MGA_2783	LOCUS_27740	sequence1:3163516..3165768(-)	partial			WP_223217130.1	glycosyltransferase family 1 protein	44.0	69.4	28.3
MGA_2806	LOCUS_27970	sequence2:16881..17417(-)	partial			WP_011204939.1	inhibitor of vertebrate lysozyme family protein	74.2	82.9	50.0
MGA_2835	LOCUS_28260	sequence2:48508..48975(-)	partial			WP_004537181.1	hypothetical protein	97.4	28.9	51.7
MGA_2842	LOCUS_28330	sequence2:53207..53956(-)	partial			WP_014207873.1	DNA/RNA non-specific endonuclease	83.5	56.4	40.0
MGA_2850	LOCUS_28410	sequence2:64271..65107(-)	frameshift		65106	WP_167691470.1	IS3 family transposase	96.4	73.2	62.8
MGA_2851	LOCUS_28420	sequence2:65104..65370(-)	frameshift		65106	WP_086025310.1	IS3-like element ISYpe1 family transposase	98.9	23.8	82.8
MGA_2860	LOCUS_28510	sequence2:75710..75985(+)	partial			WP_004192056.1	MbtH family NRPS accessory protein	73.6	83.8	76.1
MGA_2865	LOCUS_28560	sequence2:81314..82528(+)	partial			WP_004526943.1	iron-siderophore ABC transporter substrate-binding protein	72.8	84.2	60.2
MGA_2876	LOCUS_28670	sequence2:99996..104081(+)	frameshift		104300,104066,104227,104228	WP_011205069.1	non-ribosomal peptide synthetase	93.9	37.4	51.8
MGA_2877	LOCUS_28680	sequence2:104105..110716(+)	frameshift		104066,104228,104295	WP_011205069.1	non-ribosomal peptide synthetase	71.4	45.0	58.3
MGA_2879	LOCUS_28700	sequence2:115883..117070(+)	partial			WP_002211649.1	GNAT family N-acetyltransferase	47.1	58.9	47.8
MGA_2930	LOCUS_29210	sequence2:176218..176676(+)	partial			WP_004540541.1	HU family DNA-binding protein	74.3	76.9	75.2
MGA_2944	LOCUS_29350	sequence2:186866..188443(+)	partial			WP_015063825.1	c-type cytochrome biogenesis protein CcmI	45.0	53.3	39.2
MGA_2959	LOCUS_29490	sequence2:204689..205678(-)	partial			WP_012545721.1	site-specific integrase	61.4	64.9	27.6
MGA_2968	LOCUS_29580	sequence2:211594..212040(+)	partial			WP_174978691.1	helix-turn-helix domain-containing protein	92.6	42.6	37.1
MGA_2969	LOCUS_29590	sequence2:212037..212597(+)	partial			WP_011976041.1	DUF1064 domain-containing protein	61.3	83.3	31.3
MGA_2981	LOCUS_29710	sequence2:219575..219781(+)	internal_stop_codon	219527..219529(+)		WP_004529292.1	IS6 family transposase	91.2	25.6	66.1
MGA_2996	LOCUS_29860	sequence2:229035..231749(+)	partial			WP_015063600.1	phage tail tape measure protein	32.9	35.6	24.2
MGA_2998	LOCUS_29880	sequence2:232173..233504(+)	partial			WP_011205531.1	phage tail protein	22.3	13.5	37.8
MGA_3012	LOCUS_30020	sequence2:245690..246010(-)	partial			WP_010201210.1	hypothetical protein	46.2	84.5	71.4
MGA_3018	LOCUS_30080	sequence2:250546..251856(-)	partial			WP_011069470.1	IpaH family type III secretion system E3 ubiquitin--protein ligase	68.3	44.7	35.8
MGA_3020	LOCUS_30100	sequence2:254353..254652(+)	frameshift,internal_stop_codon	254650..254652(+)	254860,254740,254725,254670	WP_141741171.1	IS3 family transposase	100.0	21.4	37.6
MGA_3022	LOCUS_30120	sequence2:255121..255285(+)	frameshift,internal_stop_codon	255284..255286(+)	254986	WP_122722792.1	IS3-like element ISPsy8 family transposase	96.3	11.6	65.4
MGA_3023	LOCUS_30130	sequence2:255307..255693(+)	internal_stop_codon	255691..255693(+),255283..255285(+)		WP_122974027.1	IS3 family transposase	100.0	28.3	55.5
MGA_3027	LOCUS_30170	sequence2:259777..268605(+)	partial			WP_104543246.1	autotransporter-associated beta strand repeat-containing protein	85.4	65.7	31.1
MGA_3029	LOCUS_30190	sequence2:270321..271736(+)	partial			WP_004526919.1	peptidoglycan DD-metalloendopeptidase family protein	56.3	54.6	47.2
MGA_3051	LOCUS_30410	sequence2:300786..301472(-)	partial			WP_054181051.1	hemagglutinin repeat-containing protein	98.7	6.6	25.4
MGA_3055	LOCUS_30450	sequence2:302964..303800(-)	frameshift		303799	WP_167691470.1	IS3 family transposase	96.4	73.2	62.8
MGA_3056	LOCUS_30460	sequence2:303797..304063(-)	frameshift		303799	WP_086025310.1	IS3-like element ISYpe1 family transposase	98.9	23.8	82.8
MGA_3129	LOCUS_31190	sequence2:395496..396074(+)	partial			WP_004193855.1	H-NS histone family protein	53.1	84.9	34.3
MGA_3136	LOCUS_31260	sequence2:405543..406961(+)	partial			WP_004530031.1	phosphonopyruvate decarboxylase	40.0	46.8	82.0
MGA_3142	LOCUS_31320	sequence2:410370..410795(+)	partial			WP_013383229.1	polymer-forming cytoskeletal protein	72.3	57.8	27.5
MGA_3151	LOCUS_31410	sequence2:417844..420189(-)	partial			WP_004554727.1	type VI secretion system membrane subunit TssM	98.8	56.8	66.2
MGA_3152	LOCUS_31420	sequence2:420104..421507(+)	partial			WP_004549277.1	type VI secretion system tip protein TssI/VgrG	71.7	40.6	56.4
MGA_3156	LOCUS_31460	sequence2:427704..428753(+)	partial			WP_054993202.1	RHS repeat-associated core domain-containing protein	96.6	23.6	26.9
MGA_3173	LOCUS_31630	sequence2:448485..449303(+)	partial			WP_005081985.1	FkbM family methyltransferase	56.6	62.2	27.8
MGA_3174	LOCUS_31640	sequence2:449426..450856(+)	partial			WP_011390481.1	tetratricopeptide repeat protein	92.0	68.5	23.9
MGA_3215	LOCUS_32050	sequence2:509514..510926(-)	partial			WP_011250239.1	MATE family efflux transporter	73.6	68.6	24.0
MGA_3216	LOCUS_32060	sequence2:510913..512184(-)	partial			WP_011393761.1	phenylacetate--CoA ligase	56.3	56.5	27.8
MGA_3217	LOCUS_32070	sequence2:512181..513830(-)	partial			WP_003899884.1	long-chain-fatty-acid--CoA ligase FadD2	72.1	68.0	25.4
MGA_3227	LOCUS_32170	sequence2:520406..522067(+)	partial			WP_004190565.1	FtsX-like permease family protein	49.0	57.5	48.0
MGA_3234	LOCUS_32240	sequence2:529738..530517(-)	frameshift		530543	WP_004523135.1	formaldehyde dehydrogenase, glutathione-independent	99.2	64.4	80.9
MGA_3235	LOCUS_32250	sequence2:530484..530933(-)	frameshift		530546	WP_004523135.1	formaldehyde dehydrogenase, glutathione-independent	87.2	32.6	88.5
MGA_3237	LOCUS_32270	sequence2:531744..533006(-)	partial			WP_236626684.1	hemagglutinin repeat-containing protein	52.4	24.0	26.2
MGA_3238	LOCUS_32280	sequence2:533392..533952(-)	partial			WP_002214794.1	S-type pyocin domain-containing protein	76.9	28.7	40.3
MGA_3239	LOCUS_32290	sequence2:534405..543626(-)	partial			WP_011205723.1	hemagglutinin repeat-containing protein	41.7	43.2	34.6
MGA_3322	LOCUS_33100	sequence2:637839..638633(-)	partial			WP_004185803.1	DUF4126 domain-containing protein	63.3	81.5	61.7
MGA_3337	LOCUS_33250	sequence2:655922..656380(+)	partial			WP_004185806.1	ribosome silencing factor	74.3	73.4	87.6
MGA_3347	LOCUS_33350	sequence2:671648..672667(+)	partial			WP_164920857.1	glycosyltransferase family A protein	31.9	32.4	49.1
MGA_3348	LOCUS_33360	sequence2:672757..673743(-)	partial			WP_010941294.1	glycosyltransferase family 2 protein	74.1	73.8	36.2
MGA_3358	LOCUS_33460	sequence2:688011..688223(-)	partial			WP_004186307.1	hypothetical protein	67.1	70.1	83.0
MGA_3361	LOCUS_33490	sequence2:692868..694295(+)	partial			WP_004186417.1	DNA translocase FtsK	99.2	27.4	87.1
MGA_3373	LOCUS_33610	sequence2:708922..709143(+)	frameshift		709378,709140	WP_012257963.1	IS5 family transposase	95.9	26.1	64.3
MGA_3374	LOCUS_33620	sequence2:709169..709444(+)	frameshift		709140,709381	WP_012257125.1	IS5 family transposase	82.4	28.0	61.3
MGA_3375	LOCUS_33630	sequence2:709396..709725(+)	frameshift		709378,709140	WP_044233954.1	IS5 family transposase	87.2	35.4	55.8
MGA_3379	LOCUS_33670	sequence2:712791..713015(-)	frameshift,internal_stop_codon	712791..712793(-)	712676,712637	WP_175897093.1	IS5 family transposase	81.1	22.2	61.7
MGA_3415	LOCUS_34030	sequence2:756154..756687(-)	frameshift		756740	WP_004550744.1	ATP-binding cassette domain-containing protein	100.0	28.1	61.5
MGA_3416	LOCUS_34040	sequence2:756588..758078(-)	frameshift		756740	WP_004550744.1	ATP-binding cassette domain-containing protein	90.3	69.1	86.8
MGA_3425	LOCUS_34130	sequence2:766773..767279(-)	partial			WP_004198668.1	sugar dehydrogenase complex small subunit	85.7	73.7	34.0
MGA_3434	LOCUS_34220	sequence2:779219..780232(+)	partial			WP_226990588.1	PIG-L family deacetylase	57.6	65.7	37.2
MGA_3438	LOCUS_34260	sequence2:782423..783907(+)	partial			WP_011948915.1	glycosyltransferase family 2 protein	66.0	75.7	25.2
MGA_3441	LOCUS_34290	sequence2:785391..787148(+)	frameshift		787124	WP_161536185.1	response regulator	41.9	31.1	41.7
MGA_3459	LOCUS_34470	sequence2:805190..806536(-)	frameshift,internal_stop_codon	806555..806557(-)	806386,806572,806518	WP_004536550.1	FimV/HubP family polar landmark protein	81.0	36.3	30.2
MGA_3470	LOCUS_34580	sequence2:817621..817911(-)	partial			WP_004536542.1	succinate dehydrogenase, cytochrome b556 subunit	100.0	70.3	70.1
MGA_3480	LOCUS_34680	sequence2:829640..830458(-)	partial			WP_017140237.1	response regulator	90.1	28.2	26.5
MGA_3482	LOCUS_34700	sequence2:831454..832587(-)	partial			WP_004191672.1	OmpA family protein	33.4	53.0	51.2
MGA_3483	LOCUS_34710	sequence2:832682..834700(-)	frameshift		834729,834723,834735	WP_001033293.1	YadA-like family protein	98.1	39.3	28.2
MGA_3484	LOCUS_34720	sequence2:834697..841884(-)	frameshift		834726,834762,834699,834780,834702	WP_011035898.1	ESPR-type extended signal peptide-containing protein	73.2	69.7	25.1
MGA_3491	LOCUS_34790	sequence2:847311..848948(+)	partial			WP_015064054.1	pilus assembly protein N-terminal domain-containing protein	70.8	83.4	31.3
MGA_3494	LOCUS_34820	sequence2:851704..852585(+)	partial			WP_010928273.1	type II secretion system F family protein	60.1	59.1	38.1
MGA_3497	LOCUS_34850	sequence2:853711..854484(+)	partial			WP_014207442.1	lytic transglycosylase domain-containing protein	59.5	59.9	43.9
MGA_3500	LOCUS_34880	sequence2:856221..857234(-)	partial			WP_004521783.1	OmpA family protein	41.5	59.7	44.1
MGA_3505	LOCUS_34930	sequence2:865260..865892(-)	frameshift		865891	WP_004187304.1	DUF1254 domain-containing protein	99.0	44.2	55.9
MGA_3506	LOCUS_34940	sequence2:865844..866683(-)	frameshift		865897	WP_004529771.1	DUF1254 domain-containing protein	93.9	54.8	50.4
MGA_3523	LOCUS_35110	sequence2:879713..880579(-)	partial			WP_002214945.1	contact-dependent inhibition toxin CdiA	45.1	3.5	36.0
MGA_3525	LOCUS_35130	sequence2:881016..883487(-)	partial			WP_011205723.1	hemagglutinin repeat-containing protein	84.4	21.6	40.4
MGA_3545	LOCUS_35330	sequence2:911720..912484(-)	partial			WP_038965090.1	FkbM family methyltransferase	54.7	50.4	35.0