{ "tc_result": [ { "organism_name": "Actinomadura macrotermitis", "strain": "strain=RB68", "accession": "GCA_009604375.1", "taxid": 2585200, "species_taxid": 2585200, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2841, "total_fragments": 2841, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Actinomadura parmotrematis", "strain": "strain=PM05-2", "accession": "GCA_019458805.1", "taxid": 2864039, "species_taxid": 2864039, "relation_to_type": "type", "validated": true, "ani": 85.1012, "matched_fragments": 1712, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura hibisca", "strain": "strain=NBRC 15177", "accession": "GCA_001552635.1", "taxid": 68565, "species_taxid": 68565, "relation_to_type": "type", "validated": true, "ani": 84.2261, "matched_fragments": 1758, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura kijaniata", "strain": "strain=NBRC 14229", "accession": "GCA_001552175.1", "taxid": 46161, "species_taxid": 46161, "relation_to_type": "type", "validated": true, "ani": 83.2864, "matched_fragments": 1752, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura namibiensis", "strain": "strain=DSM 44197", "accession": "GCA_014138665.1", "taxid": 182080, "species_taxid": 182080, "relation_to_type": "type", "validated": true, "ani": 83.1944, "matched_fragments": 1818, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura violacea", "strain": "strain=LCR2-06", "accession": "GCA_017573465.1", "taxid": 2819934, "species_taxid": 2819934, "relation_to_type": "type", "validated": true, "ani": 82.7414, "matched_fragments": 1770, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura montaniterrae", "strain": "strain=CYP1-1B", "accession": "GCA_008923365.1", "taxid": 1803903, "species_taxid": 1803903, "relation_to_type": "type", "validated": true, "ani": 82.6709, "matched_fragments": 1642, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura nitritigenes", "strain": "strain=L46", "accession": "GCA_017573545.1", "taxid": 134602, "species_taxid": 134602, "relation_to_type": "type", "validated": true, "ani": 82.6019, "matched_fragments": 1728, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura rubrobrunea", "strain": "strain=NBRC 15275", "accession": "GCA_001552235.1", "taxid": 115335, "species_taxid": 115335, "relation_to_type": "type", "validated": true, "ani": 82.2894, "matched_fragments": 1279, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura rubrisoli", "strain": "strain=H3C3", "accession": "GCA_004349215.1", "taxid": 2530368, "species_taxid": 2530368, "relation_to_type": "type", "validated": true, "ani": 82.2315, "matched_fragments": 1479, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura darangshiensis", "strain": "strain=DSM 45941", "accession": "GCA_004349235.1", "taxid": 705336, "species_taxid": 705336, "relation_to_type": "type", "validated": true, "ani": 82.2266, "matched_fragments": 1451, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura geliboluensis", "strain": "strain=A8036", "accession": "GCA_005889745.1", "taxid": 882440, "species_taxid": 882440, "relation_to_type": "type", "validated": true, "ani": 82.1719, "matched_fragments": 1411, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura madurae", "strain": "strain=DSM 43067", "accession": "GCA_900115095.1", "taxid": 1993, "species_taxid": 1993, "relation_to_type": "type", "validated": true, "ani": 82.1631, "matched_fragments": 1575, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura rupiterrae", "strain": "strain=DSM 45251", "accession": "GCA_024172125.1", "taxid": 559627, "species_taxid": 559627, "relation_to_type": "type", "validated": true, "ani": 81.9576, "matched_fragments": 1628, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura graeca", "strain": "strain=32-07", "accession": "GCA_019175365.1", "taxid": 2750812, "species_taxid": 2750812, "relation_to_type": "type", "validated": true, "ani": 81.9458, "matched_fragments": 1537, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura spongiicola", "strain": "strain=LHW52907", "accession": "GCA_003432485.1", "taxid": 2303421, "species_taxid": 2303421, "relation_to_type": "type", "validated": true, "ani": 81.0379, "matched_fragments": 1303, "total_fragments": 2841, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 9.26, "strain_heterogeneity": 25.0 }, "gtdb_result": [ { "accession": "GCF_009604375.1", "gtdb_species": "s__Spirillospora macrotermitis", "ani": 100.0, "matched_fragments": 2841, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_001552635.1", "gtdb_species": "s__Spirillospora hibisca", "ani": 84.2155, "matched_fragments": 1759, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001552175.1", "gtdb_species": "s__Spirillospora kijaniata", "ani": 83.3013, "matched_fragments": 1750, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.32", "min_intra_species_ani": "97.32", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013211575.1", "gtdb_species": "s__Spirillospora verrucosospora", "ani": 82.8034, "matched_fragments": 1767, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.82", "min_intra_species_ani": "95.82", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009793335.1", "gtdb_species": "s__Spirillospora sp009793335", "ani": 82.7382, "matched_fragments": 1771, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008923365.1", "gtdb_species": "s__Spirillospora montaniterrae", "ani": 82.6209, "matched_fragments": 1653, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017573545.1", "gtdb_species": "s__Spirillospora nitritigenes", "ani": 82.5963, "matched_fragments": 1727, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.12", "min_intra_species_ani": "95.12", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013372625.1", "gtdb_species": "s__Spirillospora sp013372625", "ani": 82.4327, "matched_fragments": 1296, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013364275.1", "gtdb_species": "s__Spirillospora sp013364275", "ani": 82.3695, "matched_fragments": 1640, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003001795.1", "gtdb_species": "s__Actinomadura_B viridilutea", "ani": 82.2495, "matched_fragments": 1325, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Actinomadura_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004349215.1", "gtdb_species": "s__Spirillospora rubrisoli", "ani": 82.2439, "matched_fragments": 1477, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004349235.1", "gtdb_species": "s__Spirillospora darangshiensis", "ani": 82.1997, "matched_fragments": 1456, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005889745.1", "gtdb_species": "s__Spirillospora geliboluensis", "ani": 82.1687, "matched_fragments": 1412, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900115095.1", "gtdb_species": "s__Spirillospora madurae", "ani": 82.1274, "matched_fragments": 1582, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.34", "min_intra_species_ani": "99.27", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900659635.1", "gtdb_species": "s__Spirillospora roseirufa", "ani": 81.8403, "matched_fragments": 1422, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003696215.1", "gtdb_species": "s__Spirillospora harenae", "ani": 81.7316, "matched_fragments": 1488, "total_fragments": 2841, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }