{ "type": "genome", "identifier": "GCF_009647605.1", "organism": "Agromyces agglutinans", "title": "Agromyces agglutinans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Henan Normal University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009647605.1", "bioproject": "PRJNA224116", "biosample": "SAMN13108302", "wgs_master": "WJIF00000000.1", "refseq_category": "reference genome", "taxid": "2662258", "species_taxid": "2662258", "organism_name": "Agromyces agglutinans", "infraspecific_name": "strain=CFH 90414", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/11/10", "asm_name": "ASM964760v1", "asm_submitter": "Henan Normal University", "gbrs_paired_asm": "GCA_009647605.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/647/605/GCF_009647605.1_ASM964760v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3911034", "genome_size_ungapped": "3910675", "gc_percent": "71.500000", "replicon_count": "0", "scaffold_count": "26", "contig_count": "26", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009647605.1-RS_2024_09_29", "annotation_date": "2024-09-29", "total_gene_count": "3670", "protein_coding_gene_count": "3597", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-11-10", "dateModified": "2019-11-10", "datePublished": "2019-11-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Agromyces agglutinans" ], "sample_taxid": [ "2662258" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Yuncheng" ], 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"GCA_013410355.1", "taxid": 286438, "species_taxid": 286438, "relation_to_type": "type", "validated": true, "ani": 82.7596, "matched_fragments": 818, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces terreus", "strain": "strain=JCM 14581", "accession": "GCA_009749465.1", "taxid": 424795, "species_taxid": 424795, "relation_to_type": "type", "validated": true, "ani": 82.728, "matched_fragments": 798, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces tardus", "strain": "strain=SJ-23", "accession": "GCA_003710805.1", "taxid": 2583849, "species_taxid": 2583849, "relation_to_type": "type", "validated": true, "ani": 82.7134, "matched_fragments": 737, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces aurantiacus", "strain": "strain=DSM 14598", "accession": "GCA_016907355.1", "taxid": 165814, "species_taxid": 165814, "relation_to_type": "type", "validated": true, "ani": 82.6776, "matched_fragments": 775, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces bracchium", "strain": "strain=JCM 11433", "accession": "GCA_009709675.1", "taxid": 88376, "species_taxid": 88376, "relation_to_type": "type", "validated": true, "ani": 82.6666, "matched_fragments": 751, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces italicus", "strain": "strain=JCM 14320", "accession": "GCA_009749375.1", "taxid": 279572, "species_taxid": 279572, "relation_to_type": "type", "validated": true, "ani": 82.578, "matched_fragments": 754, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces cerinus subsp. cerinus", "strain": "strain=DSM 8595", "accession": "GCA_900142065.1", "taxid": 232089, "species_taxid": 33878, "relation_to_type": "type", "validated": true, "ani": 82.5746, "matched_fragments": 804, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces italicus", "strain": "strain=DSM 16388", "accession": "GCA_000421545.1", "taxid": 279572, "species_taxid": 279572, "relation_to_type": "type", "validated": true, "ani": 82.4839, "matched_fragments": 757, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces luteolus", "strain": "strain=JCM 11431", "accession": "GCA_009729855.1", "taxid": 88373, "species_taxid": 88373, "relation_to_type": "type", "validated": true, "ani": 82.4695, "matched_fragments": 764, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mediolanus", "strain": "strain=JCM 3346", "accession": "GCA_014648575.1", "taxid": 41986, "species_taxid": 41986, "relation_to_type": "type", "validated": true, "ani": 82.3604, "matched_fragments": 738, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces flavus", "strain": "strain=CCM 7623", "accession": "GCA_014635805.1", "taxid": 589382, "species_taxid": 589382, "relation_to_type": "type", "validated": true, "ani": 82.3403, "matched_fragments": 713, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces flavus", "strain": "strain=CPCC 202695", "accession": "GCA_004366335.2", "taxid": 589382, "species_taxid": 589382, "relation_to_type": "type", "validated": true, "ani": 82.3037, "matched_fragments": 724, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces marinus", "strain": "strain=DSM 26151", "accession": "GCA_021442325.1", "taxid": 1389020, "species_taxid": 1389020, "relation_to_type": "type", "validated": true, "ani": 82.2916, "matched_fragments": 685, "total_fragments": 1292, "ani_threshold": 95, "status": "below_threshold" }, { 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