{ "type": "genome", "identifier": "GCF_009659515.1", "organism": "Gracilibacillus thailandensis", "title": "Gracilibacillus thailandensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Sichuan University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009659515.1", "bioproject": "PRJNA224116", "biosample": "SAMN13151297", "wgs_master": "WJEE00000000.1", "refseq_category": "na", "taxid": "563735", "species_taxid": "563735", "organism_name": "Gracilibacillus thailandensis", "infraspecific_name": "strain=TP2-8", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/11/12", "asm_name": "ASM965951v1", "asm_submitter": "Sichuan University", "gbrs_paired_asm": "GCA_009659515.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/659/515/GCF_009659515.1_ASM965951v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4326512", "genome_size_ungapped": "4326512", "gc_percent": "36.500000", "replicon_count": "0", "scaffold_count": "116", "contig_count": "116", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009659515.1-RS_2025_01_10", "annotation_date": "2025-01-10", "total_gene_count": "4292", "protein_coding_gene_count": "4161", "non_coding_gene_count": "78", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-11-12", "dateModified": "2019-11-12", "datePublished": "2019-11-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Gracilibacillus thailandensis" ], "sample_taxid": [ "563735" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Thailand: Nonthaburi province" ], "sample_host_location_id": [], "data_size": "1.229 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4326512", "Number of Sequences": "116", "Longest Sequences (bp)": "323395", "N50 (bp)": "73029", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "36.6", "Number of CDSs": "4223", "Average Protein Length": "287.2", "Coding Ratio (%)": "84.1", "Number of rRNAs": "4", "Number of tRNAs": "58", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Gracilibacillus thailandensis", "strain": "strain=TP2-8", "accession": "GCA_009659515.1", "taxid": 563735, "species_taxid": 563735, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1383, "total_fragments": 1388, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Gracilibacillus thailandensis", "strain": "strain=TP2-8", "accession": "GCA_010994055.1", "taxid": 563735, "species_taxid": 563735, "relation_to_type": "type", "validated": true, "ani": 99.9668, "matched_fragments": 1329, "total_fragments": 1388, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Gracilibacillus lacisalsi", "strain": "strain=DSM 19029", "accession": "GCA_000377765.1", "taxid": 393087, "species_taxid": 393087, "relation_to_type": "type", "validated": true, "ani": 96.1393, "matched_fragments": 1160, "total_fragments": 1388, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Gracilibacillus saliphilus", "strain": "strain=YIM 91119", "accession": "GCA_010994085.1", "taxid": 543890, "species_taxid": 543890, "relation_to_type": "type", "validated": true, "ani": 95.0364, "matched_fragments": 1127, "total_fragments": 1388, "ani_threshold": 95, "status": "inconclusive" 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halmapala", "strain": "strain=DSM 8723", "accession": "GCA_002019665.1", "taxid": 79882, "species_taxid": 79882, "relation_to_type": "type", "validated": true, "ani": 75.9833, "matched_fragments": 56, "total_fragments": 1388, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gottfriedia solisilvae", "strain": "strain=CGMCC 1.14993", "accession": "GCA_014640495.1", "taxid": 1516104, "species_taxid": 1516104, "relation_to_type": "type", "validated": true, "ani": 75.7866, "matched_fragments": 54, "total_fragments": 1388, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gottfriedia solisilvae", "strain": "strain=NEAU-cbsb5", "accession": "GCA_002128405.1", "taxid": 1516104, "species_taxid": 1516104, "relation_to_type": "type", "validated": true, "ani": 75.7308, "matched_fragments": 53, "total_fragments": 1388, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, 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"spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Gracilibacillus", "thailandensis" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }