{ "type": "genome", "identifier": "GCF_009668025.1", "organism": "Larkinella terrae", "title": "Larkinella terrae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Huazhong Agricultural University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009668025.1", "bioproject": "PRJNA224116", "biosample": "SAMN13245944", "wgs_master": "WJXZ00000000.1", "refseq_category": "reference genome", "taxid": "2025311", "species_taxid": "2025311", "organism_name": "Larkinella terrae", "infraspecific_name": "strain=KCTC 52001", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/11/18", "asm_name": "ASM966802v1", "asm_submitter": "Huazhong Agricultural University", "gbrs_paired_asm": "GCA_009668025.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/668/025/GCF_009668025.1_ASM966802v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7848247", "genome_size_ungapped": "7847997", "gc_percent": "51.500000", "replicon_count": "0", "scaffold_count": "22", "contig_count": "22", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009668025.1-RS_2024_08_03", "annotation_date": "2024-08-03", "total_gene_count": "6436", "protein_coding_gene_count": "6362", "non_coding_gene_count": "53", "pubmed_id": "29019013" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-11-18", "dateModified": "2019-11-18", "datePublished": "2019-11-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Larkinella terrae" ], "sample_taxid": [ "2025311" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": 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"ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Larkinella rosea", "strain": "strain=KCTC52004", "accession": "GCA_003858635.1", "taxid": 2025312, "species_taxid": 2025312, "relation_to_type": "type", "validated": true, "ani": 86.4322, "matched_fragments": 2090, "total_fragments": 2604, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Larkinella humicola", "strain": "strain=MA1", "accession": "GCA_008727875.1", "taxid": 2607654, "species_taxid": 2607654, "relation_to_type": "type", "validated": true, "ani": 81.8326, "matched_fragments": 1661, "total_fragments": 2604, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Larkinella punicea", "strain": "strain=ZZJ9", "accession": "GCA_003334855.1", "taxid": 2315727, "species_taxid": 2315727, "relation_to_type": "type", "validated": true, "ani": 81.8236, "matched_fragments": 1641, "total_fragments": 2604, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": 0.0, "sporulation": 0.0, "motility": 1.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Larkinella", "terrae" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }