{ "tc_result": [ { "organism_name": "Pseudoduganella rivuli", "strain": "strain=FT92W", "accession": "GCA_009674485.1", "taxid": 2666085, "species_taxid": 2666085, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2682, "total_fragments": 2686, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudoduganella ginsengisoli", "strain": "strain=KCTC 42409", "accession": "GCA_009720865.1", "taxid": 1462440, "species_taxid": 1462440, "relation_to_type": "type", "validated": true, "ani": 86.9245, "matched_fragments": 1791, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoduganella namucuonensis", "strain": "strain=CGMCC 1.11014", "accession": "GCA_900116645.1", "taxid": 1035707, "species_taxid": 1035707, "relation_to_type": "type", "validated": true, "ani": 82.2324, "matched_fragments": 1617, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoduganella aquatica", "strain": "strain=FT127W", "accession": "GCA_009857595.1", "taxid": 2660641, "species_taxid": 2660641, "relation_to_type": "type", "validated": true, "ani": 82.1023, "matched_fragments": 1301, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas apoptosis", "strain": "strain=LX47W", "accession": "GCA_014042355.1", "taxid": 2758570, "species_taxid": 2758570, "relation_to_type": "type", "validated": true, "ani": 81.064, "matched_fragments": 1074, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas brunnea", "strain": "strain=LX20W", "accession": "GCA_014042345.1", "taxid": 2758569, "species_taxid": 2758569, "relation_to_type": "type", "validated": true, "ani": 80.9773, "matched_fragments": 1104, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas fusca", "strain": "strain=FT3S", "accession": "GCA_014042365.1", "taxid": 2758568, "species_taxid": 2758568, "relation_to_type": "type", "validated": true, "ani": 80.9701, "matched_fragments": 1084, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas aquatica", "strain": "strain=FT29W", "accession": "GCA_009380215.1", "taxid": 2743357, "species_taxid": 2743357, "relation_to_type": "type", "validated": true, "ani": 80.8473, "matched_fragments": 1142, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoduganella violacea", "strain": "strain=CECT 8897", "accession": "GCA_014191875.1", "taxid": 1715466, "species_taxid": 1715466, "relation_to_type": "type", "validated": true, "ani": 80.784, "matched_fragments": 1038, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Duganella aceris", "strain": "strain=SAP-35", "accession": "GCA_011090165.1", "taxid": 2703883, "species_taxid": 2703883, "relation_to_type": "type", "validated": true, "ani": 80.5051, "matched_fragments": 1083, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoduganella buxea", "strain": "strain=KCTC 52429", "accession": "GCA_009720835.1", "taxid": 1949069, "species_taxid": 1949069, "relation_to_type": "type", "validated": true, "ani": 80.4526, "matched_fragments": 1058, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Duganella lactea", "strain": "strain=FT50W", "accession": "GCA_009857505.1", "taxid": 2692173, "species_taxid": 2692173, "relation_to_type": "type", "validated": true, "ani": 80.2209, "matched_fragments": 991, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Duganella sacchari", "strain": "strain=Sac-22", "accession": "GCA_900143065.1", "taxid": 551987, "species_taxid": 551987, "relation_to_type": "type", "validated": true, "ani": 80.1094, "matched_fragments": 1014, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoduganella flava", "strain": "strain=CGMCC 1.10685", "accession": "GCA_007830495.1", "taxid": 871742, "species_taxid": 871742, "relation_to_type": "type", "validated": true, "ani": 80.0091, "matched_fragments": 1110, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Duganella phyllosphaerae", "strain": "strain=T54", "accession": "GCA_001758785.1", "taxid": 762836, "species_taxid": 762836, "relation_to_type": "type", "validated": true, "ani": 79.9896, "matched_fragments": 980, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Komagataeibacter swingsii", "strain": "strain=LMG 22125", "accession": "GCA_003207895.1", "taxid": 215220, "species_taxid": 215220, "relation_to_type": "type", "validated": true, "ani": 75.1291, "matched_fragments": 61, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pleomorphomonas carboxyditropha", "strain": "strain=SVCO-16", "accession": "GCA_002770725.1", "taxid": 2023338, "species_taxid": 2023338, "relation_to_type": "type", "validated": true, "ani": 74.9742, "matched_fragments": 159, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novacetimonas cocois", "strain": "strain=WE7", "accession": "GCA_003311635.1", "taxid": 1747507, "species_taxid": 1747507, "relation_to_type": "type", "validated": true, "ani": 74.9727, "matched_fragments": 54, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Komagataeibacter melaceti", "strain": "strain=AV382", "accession": "GCA_003403295.1", "taxid": 2766577, "species_taxid": 2766577, "relation_to_type": "type", "validated": true, "ani": 74.813, "matched_fragments": 62, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinocrinis puniceicyclus", "strain": "strain=DSM 45618", "accession": "GCA_018283645.1", "taxid": 977794, "species_taxid": 977794, "relation_to_type": "type", "validated": true, "ani": 74.6264, "matched_fragments": 140, "total_fragments": 2686, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_009674485.1", "gtdb_species": "s__Pseudoduganella sp009674485", "ani": 100.0, "matched_fragments": 2682, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudoduganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_009720865.1", "gtdb_species": "s__Pseudoduganella 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"ani": 82.1776, "matched_fragments": 1442, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudoduganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.77", "min_intra_species_ani": "95.97", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.89", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_009857595.1", "gtdb_species": "s__Pseudoduganella aquatica_A", "ani": 82.0474, "matched_fragments": 1312, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudoduganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001425265.1", "gtdb_species": "s__Pseudoduganella sp001425265", "ani": 81.9518, "matched_fragments": 1423, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudoduganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001425045.1", "gtdb_species": "s__Pseudoduganella sp001425045", "ani": 81.9301, "matched_fragments": 1453, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudoduganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001191005.1", "gtdb_species": "s__Pseudoduganella sp001191005", "ani": 80.7789, "matched_fragments": 1047, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudoduganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_008011715.1", "gtdb_species": "s__Pseudoduganella haloabium", "ani": 80.549, "matched_fragments": 1060, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudoduganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.13", "min_intra_species_ani": "98.13", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009720835.1", "gtdb_species": "s__Pseudoduganella buxea", "ani": 80.4725, "matched_fragments": 1055, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudoduganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_019219065.1", "gtdb_species": "s__Duganella sp019219065", "ani": 80.2841, "matched_fragments": 976, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900143065.1", "gtdb_species": "s__Duganella sacchari", "ani": 80.1079, "matched_fragments": 1013, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duganella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.30", "min_intra_species_ani": "97.30", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003311635.1", "gtdb_species": "s__Komagataeibacter cocois", "ani": 74.9773, "matched_fragments": 53, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Komagataeibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.20", "min_intra_species_ani": "95.16", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_002770725.1", "gtdb_species": "s__Pleomorphomonas carboxyditropha", "ani": 74.9725, "matched_fragments": 154, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae;g__Pleomorphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.10", "min_intra_species_ani": "98.10", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_015709455.1", "gtdb_species": "s__Methylosinus sp015709455", "ani": 74.9473, "matched_fragments": 72, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylosinus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001899205.1", "gtdb_species": "s__Mesorhizobium sp001899205", "ani": 74.8635, "matched_fragments": 152, "total_fragments": 2686, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.31", "min_intra_species_ani": "96.64", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" } ] }