{
    "type": "genome",
    "identifier": "GCF_009697385.1",
    "organism": "Selenomonas montiformis",
    "title": "Selenomonas montiformis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "UniKlinik RWTH Aachen",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_009697385.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN12619166",
        "wgs_master": "VUNL00000000.1",
        "refseq_category": "reference genome",
        "taxid": "2652285",
        "species_taxid": "2652285",
        "organism_name": "Selenomonas montiformis",
        "infraspecific_name": "strain=WCA-380-WT-3B3",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/11/23",
        "asm_name": "ASM969738v1",
        "asm_submitter": "UniKlinik RWTH Aachen",
        "gbrs_paired_asm": "GCA_009697385.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/697/385/GCF_009697385.1_ASM969738v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2640693",
        "genome_size_ungapped": "2640693",
        "gc_percent": "52.500000",
        "replicon_count": "0",
        "scaffold_count": "26",
        "contig_count": "26",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_009697385.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "2568",
        "protein_coding_gene_count": "2452",
        "non_coding_gene_count": "86",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-11-23",
    "dateModified": "2019-11-23",
    "datePublished": "2019-11-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Selenomonas montiformis"
        ],
        "sample_taxid": [
            "2652285"
        ],
        "sample_host_organism": [
            "Sus scrofa (WT)"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Freising"
        ],
        "sample_host_location_id": [],
        "data_size": "0.747 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2640693",
        "Number of Sequences": "26",
        "Longest Sequences (bp)": "308428",
        "N50 (bp)": "183398",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "52.7",
        "Number of CDSs": "2522",
        "Average Protein Length": "313.5",
        "Coding Ratio (%)": "89.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "73",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Selenomonas montiformis",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 864,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Mitsuokella jalaludinii",
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                "accession": "GCA_000702905.1",
                "taxid": 187979,
                "species_taxid": 187979,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 203,
                "total_fragments": 867,
                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Mitsuokella multacida",
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                "species_taxid": 52226,
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                "matched_fragments": 222,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Selenomonas ruminantium subsp. ruminantium",
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                "species_taxid": 971,
                "relation_to_type": "type",
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                "ani": 78.3083,
                "matched_fragments": 185,
                "total_fragments": 867,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Selenomonas sputigena",
                "strain": "strain=ATCC 35185",
                "accession": "GCA_000160495.1",
                "taxid": 69823,
                "species_taxid": 69823,
                "relation_to_type": "neotype",
                "validated": true,
                "ani": 76.8754,
                "matched_fragments": 79,
                "total_fragments": 867,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_009697385.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas_A",
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                "mean_intra_species_ani": "98.83",
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                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
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                "mean_intra_species_ani": "N/A",
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            },
            {
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000702005.1",
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            {
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                "accession": "GCA_902777615.1",
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    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}