{ "type": "genome", "identifier": "GCF_009707235.1", "organism": "Nocardioides marmotae", "title": "Nocardioides marmotae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "China CDC", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009707235.1", "bioproject": "PRJNA224116", "biosample": "SAMN13164487", "wgs_master": "WLCI00000000.1", "refseq_category": "na", "taxid": "2663857", "species_taxid": "2663857", "organism_name": "Nocardioides marmotae", "infraspecific_name": "strain=zg-579", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/11/23", "asm_name": "ASM970723v1", "asm_submitter": "China CDC", "gbrs_paired_asm": "GCA_009707235.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/707/235/GCF_009707235.1_ASM970723v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4378035", "genome_size_ungapped": "4378035", "gc_percent": "73.500000", "replicon_count": "0", "scaffold_count": "29", "contig_count": "29", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-01-22", "total_gene_count": "4172", "protein_coding_gene_count": "4101", "non_coding_gene_count": "56", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-11-23", "dateModified": "2019-11-23", "datePublished": "2019-11-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Nocardioides marmotae" ], "sample_taxid": [ "2663857" ], "sample_host_organism": [ "Marmot" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Yushu prefecture, Qinghai 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{ "organism_name": "Nocardioides ginsengisegetis", "strain": "strain=DSM 21349", "accession": "GCA_014138045.1", "taxid": 661491, "species_taxid": 661491, "relation_to_type": "type", "validated": true, "ani": 82.5228, "matched_fragments": 840, "total_fragments": 1445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides marinisabuli", "strain": "strain=DSM 18965", "accession": "GCA_013466785.1", "taxid": 419476, "species_taxid": 419476, "relation_to_type": "type", "validated": true, "ani": 82.4603, "matched_fragments": 849, "total_fragments": 1445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides kribbensis", "strain": "strain=DSM 16314", "accession": "GCA_015070375.1", "taxid": 305517, "species_taxid": 305517, "relation_to_type": "type", "validated": true, "ani": 82.3549, "matched_fragments": 830, "total_fragments": 1445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides salarius", 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