{ "tc_result": [ { "organism_name": "Aquitalea aquatilis", "strain": "strain=THG-DN7.12", "accession": "GCA_005155025.1", "taxid": 1537400, "species_taxid": 1537400, "relation_to_type": "type", "validated": true, "ani": 80.2105, "matched_fragments": 517, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquitalea denitrificans", "strain": "strain=5YN1-3", "accession": "GCA_009856625.1", "taxid": 519081, "species_taxid": 519081, "relation_to_type": "type", "validated": true, "ani": 80.1419, "matched_fragments": 487, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquitalea magnusonii", "strain": "strain=DSM 25134", "accession": "GCA_003202035.1", "taxid": 332411, "species_taxid": 332411, "relation_to_type": "suspected-type", "validated": true, "ani": 79.9409, "matched_fragments": 499, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquitalea pelogenes", "strain": "strain=CCM 7557", "accession": "GCA_001515305.1", "taxid": 1293573, "species_taxid": 1293573, "relation_to_type": "type", "validated": true, "ani": 79.777, "matched_fragments": 466, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium sphagni", "strain": "strain=IIBBL 14B-1", "accession": "GCA_001855555.1", "taxid": 1903179, "species_taxid": 1903179, "relation_to_type": "type", "validated": true, "ani": 79.3391, "matched_fragments": 384, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium violaceum", "strain": "strain=ATCC 12472", "accession": "GCA_000007705.1", "taxid": 536, "species_taxid": 536, "relation_to_type": "type", "validated": true, "ani": 79.2599, "matched_fragments": 403, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium amazonense", "strain": "strain=DSM 26508", "accession": "GCA_001855565.1", "taxid": 1382803, "species_taxid": 1382803, "relation_to_type": "type", "validated": true, "ani": 79.2041, "matched_fragments": 381, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium paludis", "strain": "strain=IIBBL 257-1", "accession": "GCA_008275125.1", "taxid": 2605945, "species_taxid": 2605945, "relation_to_type": "type", "validated": true, "ani": 79.1393, "matched_fragments": 413, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium phragmitis", "strain": "strain=IIBBL 112-1", "accession": "GCA_003325475.1", "taxid": 2202141, "species_taxid": 2202141, "relation_to_type": "type", "validated": true, "ani": 79.137, "matched_fragments": 385, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium violaceum", "strain": "strain=NCTC9757", "accession": "GCA_900446805.1", "taxid": 536, "species_taxid": 536, "relation_to_type": "type", "validated": true, "ani": 79.1026, "matched_fragments": 409, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium aquaticum", "strain": "strain=DSM 19852", "accession": "GCA_021129195.1", "taxid": 467180, "species_taxid": 467180, "relation_to_type": "type", "validated": true, "ani": 79.0677, "matched_fragments": 391, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium sinusclupearum", "strain": "strain=MWU13-2610", "accession": "GCA_002902845.1", "taxid": 2077146, "species_taxid": 2077146, "relation_to_type": "type", "validated": true, "ani": 79.0008, "matched_fragments": 375, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium alkanivorans", "strain": "strain=IITR-71", "accession": "GCA_016937655.1", "taxid": 1071719, "species_taxid": 1071719, "relation_to_type": "type", "validated": true, "ani": 78.964, "matched_fragments": 417, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vogesella urethralis", "strain": "strain=YM-1", "accession": "GCA_007644045.2", "taxid": 2592656, "species_taxid": 2592656, "relation_to_type": "type", "validated": true, "ani": 78.9436, "matched_fragments": 387, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium alticapitis", "strain": "strain=MWU14-2602", "accession": "GCA_002924365.1", "taxid": 2073169, "species_taxid": 2073169, "relation_to_type": "type", "validated": true, "ani": 78.8852, "matched_fragments": 352, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium vaccinii", "strain": "strain=MWU205", "accession": "GCA_000971335.1", "taxid": 1108595, "species_taxid": 1108595, "relation_to_type": "type", "validated": true, "ani": 78.8352, "matched_fragments": 378, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vogesella mureinivorans", "strain": "strain=389", "accession": "GCA_007644035.2", "taxid": 657276, "species_taxid": 657276, "relation_to_type": "type", "validated": true, "ani": 78.6595, "matched_fragments": 346, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium piscinae", "strain": "strain=DSM 23278", "accession": "GCA_021129175.1", "taxid": 686831, "species_taxid": 686831, "relation_to_type": "type", "validated": true, "ani": 78.624, "matched_fragments": 378, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rivicola pingtungensis", "strain": "strain=DSM 29661", "accession": "GCA_003201855.1", "taxid": 1054498, "species_taxid": 1054498, "relation_to_type": "type", "validated": true, "ani": 78.2178, "matched_fragments": 252, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gulbenkiania indica", "strain": "strain=DSM 17901", "accession": "GCA_001517245.1", "taxid": 375574, "species_taxid": 375574, "relation_to_type": "type", "validated": true, "ani": 78.0547, "matched_fragments": 301, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gulbenkiania indica", "strain": "strain=DSM 17901", "accession": "GCA_001418035.1", "taxid": 375574, "species_taxid": 375574, "relation_to_type": "type", "validated": true, "ani": 78.0547, "matched_fragments": 301, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquaspirillum serpens", "strain": "strain=DSM 68", "accession": "GCA_000420525.1", "taxid": 190, "species_taxid": 190, "relation_to_type": "type", "validated": true, "ani": 76.7857, "matched_fragments": 59, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tepidimonas thermarum", "strain": "strain=AA-1", "accession": "GCA_007556705.1", "taxid": 335431, "species_taxid": 335431, "relation_to_type": "type", "validated": true, "ani": 76.504, "matched_fragments": 67, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquabacterium soli", "strain": "strain=SJQ9", "accession": "GCA_003933735.1", "taxid": 2493092, "species_taxid": 2493092, "relation_to_type": "type", "validated": true, "ani": 76.3617, "matched_fragments": 72, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinibacter tainanensis", "strain": "strain=DSM 15459", "accession": "GCA_000429785.1", "taxid": 230667, "species_taxid": 230667, "relation_to_type": "type", "validated": true, "ani": 76.129, "matched_fragments": 92, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax caeni", "strain": "strain=R-24608", "accession": "GCA_900116825.1", "taxid": 343013, "species_taxid": 343013, "relation_to_type": "type", "validated": true, "ani": 75.9456, "matched_fragments": 62, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Comamonas avium", "strain": "strain=Sa2CVA6", "accession": "GCA_014836675.1", "taxid": 2762231, "species_taxid": 2762231, "relation_to_type": "type", "validated": true, "ani": 75.9259, "matched_fragments": 50, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Comamonas koreensis", "strain": "strain=KCTC 12005", "accession": "GCA_021026195.1", "taxid": 160825, "species_taxid": 160825, "relation_to_type": "type", "validated": true, "ani": 75.6827, "matched_fragments": 76, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax konjaci", "strain": "strain=DSM 7481", "accession": "GCA_900112675.1", "taxid": 32040, "species_taxid": 32040, "relation_to_type": "type", "validated": true, "ani": 75.4258, "matched_fragments": 59, "total_fragments": 1115, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 91.2, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_009707705.1", "gtdb_species": "s__WLYX01 sp009707705", "ani": 100.0, "matched_fragments": 1114, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__WLYX01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_005155025.1", "gtdb_species": "s__Aquitalea aquatilis", "ani": 80.2182, "matched_fragments": 513, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Aquitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.19", "min_intra_species_ani": "99.19", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002217795.2", "gtdb_species": "s__Aquitalea magnusonii_B", "ani": 80.1458, "matched_fragments": 501, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Aquitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009856625.1", "gtdb_species": "s__Aquitalea denitrificans", "ani": 80.1171, "matched_fragments": 487, "total_fragments": 1115, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.12", "min_intra_species_ani": "99.12", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000007705.1", "gtdb_species": "s__Chromobacterium violaceum", "ani": 79.1732, "matched_fragments": 399, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.58", "min_intra_species_ani": "98.16", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 26, "status": "-" }, { "accession": "GCF_900090205.1", "gtdb_species": "s__Vogesella sp900090205", "ani": 79.1658, "matched_fragments": 392, "total_fragments": 1115, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008275125.1", "gtdb_species": "s__Chromobacterium paludis", "ani": 79.0724, "matched_fragments": 415, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003052555.1", "gtdb_species": "s__Chromobacterium sp003052555", "ani": 78.9974, "matched_fragments": 400, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016937655.1", "gtdb_species": "s__Chromobacterium alkanivorans", "ani": 78.964, "matched_fragments": 418, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.67", "min_intra_species_ani": "98.67", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016428945.1", "gtdb_species": "s__Chromobacterium sp016428945", "ani": 78.9607, "matched_fragments": 378, "total_fragments": 1115, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Aquaspirillaceae;g__Rivicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017998615.1", "gtdb_species": "s__Vogesella sp017998615", "ani": 78.1172, "matched_fragments": 240, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Vogesella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_900549295.1", "gtdb_species": "s__Azonexus sp900549295", "ani": 76.4253, "matched_fragments": 80, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.94", "min_intra_species_ani": "99.94", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_003963005.1", "gtdb_species": "s__Pelomonas sp003963005", "ani": 75.69, "matched_fragments": 55, "total_fragments": 1115, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pelomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }