{ "type": "genome", "identifier": "GCF_009707925.1", "organism": "Blautia luti DSM 14534 = JCM 17040", "title": "Blautia luti DSM 14534 = JCM 17040", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Universidad Andres Bello", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009707925.1", "bioproject": "PRJNA224116", "biosample": "SAMN13319600", "wgs_master": "WMBC00000000.1", "refseq_category": "na", "taxid": "649762", "species_taxid": "89014", "organism_name": "Blautia luti DSM 14534 = JCM 17040", "infraspecific_name": "strain=DSM 14534", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/11/25", "asm_name": "ASM970792v1", "asm_submitter": "Universidad Andres Bello", "gbrs_paired_asm": "GCA_009707925.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/707/925/GCF_009707925.1_ASM970792v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3712230", "genome_size_ungapped": "3712230", "gc_percent": "43.000000", "replicon_count": "0", "scaffold_count": "71", "contig_count": "71", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-02-29", "total_gene_count": "3471", "protein_coding_gene_count": "3298", "non_coding_gene_count": "74", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-11-25", "dateModified": "2019-11-25", "datePublished": "2019-11-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Blautia luti DSM 14534 = JCM 17040" ], "sample_taxid": [ "649762" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany" ], "sample_host_location_id": [], "data_size": "1.048 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3712230", "Number of Sequences": "71", "Longest Sequences (bp)": "614844", "N50 (bp)": "205916", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "42.9", "Number of CDSs": "3411", "Average Protein Length": "316.6", "Coding Ratio (%)": "87.3", "Number of rRNAs": "4", "Number of tRNAs": "58", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Blautia luti", "strain": "strain=DSM 14534", "accession": "GCA_009707925.1", "taxid": 89014, "species_taxid": 89014, "relation_to_type": "suspected-type", "validated": true, "ani": 100.0, "matched_fragments": 1211, "total_fragments": 1214, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Blautia wexlerae", "strain": "strain=DSM 19850", "accession": "GCA_025148125.1", "taxid": 418240, "species_taxid": 418240, "relation_to_type": "suspected-type", "validated": true, "ani": 86.6413, "matched_fragments": 741, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia wexlerae", "strain": "strain=DSM 19850", "accession": "GCA_000484655.1", "taxid": 418240, "species_taxid": 418240, "relation_to_type": "suspected-type", "validated": true, "ani": 86.5026, "matched_fragments": 703, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia obeum", "strain": "strain=ATCC 29174", "accession": "GCA_000153905.1", "taxid": 40520, "species_taxid": 40520, "relation_to_type": "type", "validated": true, "ani": 82.8292, "matched_fragments": 398, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia obeum", "strain": "strain=ATCC 29174", "accession": "GCA_025147765.1", "taxid": 40520, "species_taxid": 40520, "relation_to_type": "type", "validated": true, "ani": 82.7242, "matched_fragments": 394, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia massiliensis", "strain": "strain=GD9", "accession": "GCA_001487165.1", "taxid": 1737424, "species_taxid": 1737424, "relation_to_type": "type", "validated": true, "ani": 82.6204, "matched_fragments": 454, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia intestinalis", "strain": "strain=27-44", "accession": "GCA_014297355.1", "taxid": 2763028, "species_taxid": 2763028, "relation_to_type": "type", "validated": true, "ani": 81.611, "matched_fragments": 382, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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"accession": "GCA_900258535.1", "taxid": 1917868, "species_taxid": 1917868, "relation_to_type": "suspected-type", "validated": true, "ani": 78.4533, "matched_fragments": 115, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Diplocloster modestus", "strain": "strain=ASD4241", "accession": "GCA_019042245.1", "taxid": 2850322, "species_taxid": 2850322, "relation_to_type": "type", "validated": true, "ani": 77.0364, "matched_fragments": 53, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lactonifactor longoviformis", "strain": "strain=DSM 17459", "accession": "GCA_002915525.1", "taxid": 341220, "species_taxid": 341220, "relation_to_type": "suspected-type", "validated": true, "ani": 76.8575, "matched_fragments": 70, "total_fragments": 1214, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, 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"gtdb_species": "s__Blautia_A sp018919065", "ani": 86.7956, "matched_fragments": 642, "total_fragments": 1214, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013300825.1", "gtdb_species": "s__Blautia_A wexlerae_B", "ani": 86.6259, "matched_fragments": 722, "total_fragments": 1214, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.68", "min_intra_species_ani": "98.07", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.86", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000484655.1", "gtdb_species": "s__Blautia_A wexlerae", "ani": 86.4944, 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"vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Blautia", "luti", "DSM", "14534", "=", "JCM", "17040" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }