{ "type": "genome", "identifier": "GCF_009711045.1", "organism": "Myroides albus", "title": "Myroides albus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing Institute of Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009711045.1", "bioproject": "PRJNA224116", "biosample": "SAMN13282226", "wgs_master": "WMJX00000000.1", "refseq_category": "na", "taxid": "2562892", "species_taxid": "2562892", "organism_name": "Myroides albus", "infraspecific_name": "strain=BIT-d1", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/11/26", "asm_name": "ASM971104v1", "asm_submitter": "Beijing Institute of Technology", "gbrs_paired_asm": "GCA_009711045.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/711/045/GCF_009711045.1_ASM971104v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3554039", "genome_size_ungapped": "3553942", "gc_percent": "34.000000", "replicon_count": "0", "scaffold_count": "152", "contig_count": "152", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009711045.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "3169", "protein_coding_gene_count": "3025", "non_coding_gene_count": "85", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-11-26", "dateModified": "2019-11-26", "datePublished": "2019-11-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Myroides albus" ], "sample_taxid": [ "2562892" ], "sample_host_organism": [ "Zophobas atratus" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Beijing" ], "sample_host_location_id": [], "data_size": "1.000 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3554039", "Number of Sequences": "152", "Longest Sequences (bp)": "300946", "N50 (bp)": "99966", "Gap Ratio (%)": "0.003517", "GCcontent (%)": "34.0", "Number of CDSs": "3013", "Average Protein Length": "329.9", "Coding Ratio (%)": "83.9", "Number of rRNAs": "3", "Number of tRNAs": "78", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Myroides albus", "strain": "strain=BIT-d1", "accession": "GCA_009711045.1", "taxid": 2562892, "species_taxid": 2562892, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1110, "total_fragments": 1119, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Myroides odoratimimus subsp. xuanwuensis", "strain": "strain=DSM 27251", "accession": "GCA_900142635.1", "taxid": 1324934, "species_taxid": 76832, "relation_to_type": "type", "validated": true, "ani": 81.5505, "matched_fragments": 481, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides odoratimimus", "strain": "strain=NCTC11180", "accession": "GCA_900453765.1", "taxid": 76832, "species_taxid": 76832, "relation_to_type": "type", "validated": true, "ani": 81.5126, "matched_fragments": 496, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides odoratimimus", "strain": "strain=CCUG39352", "accession": "GCA_001485415.1", "taxid": 76832, "species_taxid": 76832, "relation_to_type": "type", "validated": true, "ani": 81.4323, "matched_fragments": 498, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides profundi", "strain": "strain=D25", "accession": "GCA_000833025.1", "taxid": 480520, "species_taxid": 480520, "relation_to_type": "type", "validated": true, "ani": 81.4011, "matched_fragments": 489, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides profundi", "strain": "strain=DSM 19823", "accession": "GCA_900111065.1", "taxid": 480520, "species_taxid": 480520, "relation_to_type": "type", "validated": true, "ani": 81.3224, "matched_fragments": 494, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides pelagicus", "strain": "strain=SM1T", "accession": "GCA_009711055.1", "taxid": 270914, "species_taxid": 270914, "relation_to_type": "type", "validated": true, "ani": 80.5337, "matched_fragments": 459, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides marinus", "strain": "strain=DSM 23048", "accession": "GCA_900109075.1", "taxid": 703342, "species_taxid": 703342, "relation_to_type": "type", "validated": true, "ani": 80.2012, "matched_fragments": 430, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides injenensis", "strain": "strain=M09-0166", "accession": "GCA_000246945.2", "taxid": 1183151, "species_taxid": 1183151, "relation_to_type": "type", "validated": true, "ani": 79.5021, "matched_fragments": 385, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides odoratus", "strain": "strain=FDAARGOS_1131", "accession": "GCA_016726985.1", "taxid": 256, "species_taxid": 256, "relation_to_type": "type", "validated": true, "ani": 79.3082, "matched_fragments": 289, "total_fragments": 1119, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides phaeus", "strain": "strain=DSM 23313", "accession": "GCA_900099675.1", "taxid": 702745, "species_taxid": 702745, 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