{ "type": "genome", "identifier": "GCF_009711055.1", "organism": "Myroides pelagicus", "title": "Myroides pelagicus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing Institute of Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009711055.1", "bioproject": "PRJNA224116", "biosample": "SAMN13282306", "wgs_master": "WMJY00000000.1", "refseq_category": "reference genome", "taxid": "270914", "species_taxid": "270914", "organism_name": "Myroides pelagicus", "infraspecific_name": "strain=SM1T", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/11/26", "asm_name": "ASM971105v1", "asm_submitter": "Beijing Institute of Technology", "gbrs_paired_asm": "GCA_009711055.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/711/055/GCF_009711055.1_ASM971105v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3344284", "genome_size_ungapped": "3344178", "gc_percent": "34.500000", "replicon_count": "0", "scaffold_count": "103", "contig_count": "103", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009711055.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "2967", "protein_coding_gene_count": "2854", "non_coding_gene_count": "77", "pubmed_id": "16902031" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-11-26", "dateModified": "2019-11-26", "datePublished": "2019-11-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Myroides pelagicus" ], "sample_taxid": [ "270914" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Beijing" ], "sample_host_location_id": [], "data_size": "0.943 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3344284", "Number of Sequences": "103", "Longest Sequences (bp)": "242091", "N50 (bp)": "83912", "Gap Ratio (%)": "0.003708", "GCcontent (%)": "34.4", "Number of CDSs": "2859", "Average Protein Length": "333.4", "Coding Ratio (%)": "85.5", "Number of rRNAs": "2", "Number of tRNAs": "70", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Myroides pelagicus", "strain": "strain=SM1T", "accession": "GCA_009711055.1", "taxid": 270914, "species_taxid": 270914, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1068, "total_fragments": 1070, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Myroides albus", "strain": "strain=BIT-d1", "accession": "GCA_009711045.1", "taxid": 2562892, "species_taxid": 2562892, "relation_to_type": "type", "validated": true, "ani": 80.427, "matched_fragments": 479, "total_fragments": 1070, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides marinus", "strain": "strain=DSM 23048", "accession": "GCA_900109075.1", "taxid": 703342, "species_taxid": 703342, "relation_to_type": "type", "validated": true, "ani": 80.287, "matched_fragments": 398, "total_fragments": 1070, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides profundi", "strain": "strain=D25", "accession": "GCA_000833025.1", "taxid": 480520, "species_taxid": 480520, "relation_to_type": "type", "validated": true, "ani": 79.5806, "matched_fragments": 389, "total_fragments": 1070, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myroides 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