{ "tc_result": [ { "organism_name": "Paracoccus litorisediminis", "strain": "strain=NBRC 112902", "accession": "GCA_009711205.1", "taxid": 2006130, "species_taxid": 2006130, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1749, "total_fragments": 1753, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Paracoccus ravus", "strain": "strain=YJ057", "accession": "GCA_004522175.1", "taxid": 2447760, "species_taxid": 2447760, "relation_to_type": "type", "validated": true, "ani": 84.4955, "matched_fragments": 923, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus aestuariivivens", "strain": "strain=NBRC 111993", "accession": "GCA_009711225.1", "taxid": 1820333, "species_taxid": 1820333, "relation_to_type": "type", "validated": true, "ani": 84.1612, "matched_fragments": 1054, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus lutimaris", "strain": "strain=CECT 8525", "accession": "GCA_003337565.1", "taxid": 1490030, "species_taxid": 1490030, "relation_to_type": "type", "validated": true, "ani": 83.307, "matched_fragments": 755, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus limosus", "strain": "strain=JCM 17370", "accession": "GCA_009711185.1", "taxid": 913252, "species_taxid": 913252, "relation_to_type": "type", "validated": true, "ani": 83.1589, "matched_fragments": 803, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus binzhouensis", "strain": "strain=wg1", "accession": "GCA_016446475.1", "taxid": 2796149, "species_taxid": 2796149, "relation_to_type": "type", "validated": true, "ani": 82.9562, "matched_fragments": 760, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus denitrificans", "strain": "strain=DSM 413", "accession": "GCA_900100045.1", "taxid": 266, "species_taxid": 266, "relation_to_type": "type", "validated": true, "ani": 82.8058, "matched_fragments": 820, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus denitrificans", "strain": "strain=NBRC 102528", "accession": "GCA_007989485.1", "taxid": 266, "species_taxid": 266, "relation_to_type": "type", "validated": true, "ani": 82.7715, "matched_fragments": 821, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus yeei", "strain": "strain=ATCC BAA-599", "accession": "GCA_000622145.1", "taxid": 147645, "species_taxid": 147645, "relation_to_type": "type", "validated": true, "ani": 82.7325, "matched_fragments": 829, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus mutanolyticus", "strain": "strain=RSP-02", "accession": "GCA_003285265.1", "taxid": 1499308, "species_taxid": 1499308, "relation_to_type": "type", "validated": true, "ani": 82.7069, "matched_fragments": 720, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus pantotrophus", "strain": "strain=DSM 2944", "accession": "GCA_003633525.1", "taxid": 82367, "species_taxid": 82367, "relation_to_type": "type", "validated": true, "ani": 82.6725, "matched_fragments": 824, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus pantotrophus", "strain": "strain=DSM 2944", "accession": "GCA_008824185.1", "taxid": 82367, "species_taxid": 82367, "relation_to_type": "type", "validated": true, "ani": 82.636, "matched_fragments": 821, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus laeviglucosivorans", "strain": "strain=DSM 100094", "accession": "GCA_900182695.1", "taxid": 1197861, "species_taxid": 1197861, "relation_to_type": "type", "validated": true, "ani": 82.5616, "matched_fragments": 827, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus aminovorans", "strain": "strain=DSM 8537", "accession": "GCA_900113565.1", "taxid": 34004, "species_taxid": 34004, "relation_to_type": "type", "validated": true, "ani": 82.5253, "matched_fragments": 744, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus aminovorans", "strain": "", "accession": "GCA_900005615.1", "taxid": 34004, "species_taxid": 34004, "relation_to_type": "type", "validated": true, "ani": 82.4345, "matched_fragments": 771, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus sulfuroxidans", "strain": "strain=CGMCC 1.5364", "accession": "GCA_007830335.1", "taxid": 384678, "species_taxid": 384678, "relation_to_type": "type", "validated": true, "ani": 81.6088, "matched_fragments": 738, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus shandongensis", "strain": "strain=wg2", "accession": "GCA_017315735.1", "taxid": 2816048, "species_taxid": 2816048, "relation_to_type": "type", "validated": true, "ani": 79.9863, "matched_fragments": 631, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus nototheniae", "strain": "strain=I-41R45", "accession": "GCA_004335005.1", "taxid": 2489002, "species_taxid": 2489002, "relation_to_type": "type", "validated": true, "ani": 79.6473, "matched_fragments": 587, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus salsus", "strain": "strain=EGI L200073", "accession": "GCA_021556615.1", "taxid": 2911061, "species_taxid": 2911061, "relation_to_type": "type", "validated": true, "ani": 78.9855, "matched_fragments": 496, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus tegillarcae", "strain": "strain=BM15", "accession": "GCA_002847305.1", "taxid": 1529068, "species_taxid": 1529068, "relation_to_type": "type", "validated": true, "ani": 78.607, "matched_fragments": 494, "total_fragments": 1753, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_009711205.1", "gtdb_species": "s__Paracoccus litorisediminis", "ani": 100.0, "matched_fragments": 1749, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.39", "min_intra_species_ani": "97.39", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_004522175.1", "gtdb_species": "s__Paracoccus ravus", "ani": 84.5143, "matched_fragments": 921, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009711225.1", "gtdb_species": "s__Paracoccus aestuariivivens", "ani": 84.1703, "matched_fragments": 1053, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003337565.1", "gtdb_species": "s__Paracoccus lutimaris", "ani": 83.3269, "matched_fragments": 753, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009711185.1", "gtdb_species": "s__Paracoccus limosus", "ani": 83.1658, "matched_fragments": 803, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009711265.1", "gtdb_species": "s__Paracoccus sp009711265", "ani": 83.131, "matched_fragments": 815, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000518925.1", "gtdb_species": "s__Paracoccus sp000518925", "ani": 83.0081, "matched_fragments": 827, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.13", "min_intra_species_ani": "98.71", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_016446475.1", "gtdb_species": "s__Paracoccus binzhouensis", "ani": 82.9281, "matched_fragments": 763, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900100045.1", "gtdb_species": "s__Paracoccus denitrificans", "ani": 82.805, "matched_fragments": 818, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.78", "min_intra_species_ani": "98.70", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.88", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_000763885.1", "gtdb_species": "s__Paracoccus versutus", "ani": 82.6822, "matched_fragments": 824, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.67", "min_intra_species_ani": "98.17", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.76", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_001546115.1", "gtdb_species": "s__Paracoccus aminovorans_B", "ani": 82.6422, "matched_fragments": 834, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.35", "min_intra_species_ani": "95.35", "mean_intra_species_af": "0.81", "min_intra_species_af": "0.81", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008824185.1", "gtdb_species": "s__Paracoccus pantotrophus", "ani": 82.6321, "matched_fragments": 820, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.22", "min_intra_species_ani": "98.98", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.84", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_001447385.1", "gtdb_species": "s__Paracoccus sp001447385", "ani": 82.6309, "matched_fragments": 834, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900182695.1", "gtdb_species": "s__Paracoccus laeviglucosivorans", "ani": 82.5615, "matched_fragments": 827, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018056045.1", "gtdb_species": "s__Paracoccus sp018056045", "ani": 82.467, "matched_fragments": 486, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900005615.1", "gtdb_species": "s__Paracoccus aminovorans", "ani": 82.4518, "matched_fragments": 769, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_007830335.1", "gtdb_species": "s__Paracoccus sulfuroxidans", "ani": 81.5859, "matched_fragments": 740, "total_fragments": 1753, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }