# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence01:3307..3705(+)	frameshift		3690	WP_009994499.1	ketopantoate reductase family protein	97.7	40.1	62.0
MGA_4	LOCUS_00040	sequence01:3717..4313(+)	frameshift		3693	WP_009994499.1	ketopantoate reductase family protein	94.4	57.1	52.9
MGA_6	LOCUS_00060	sequence01:5722..5937(+)	frameshift		5877	WP_000085672.1	methionine ABC transporter ATP-binding protein	60.6	12.2	58.1
MGA_7	LOCUS_00070	sequence01:5892..6956(+)	frameshift		5877	WP_000569655.1	virulence-associated ABC transporter ATP-binding protein SfbB	78.5	82.0	49.6
MGA_20	LOCUS_00200	sequence01:18349..18756(+)	frameshift		18690	WP_007054041.1	PHP domain-containing protein	85.9	39.1	59.5
MGA_21	LOCUS_00210	sequence01:18696..19232(+)	frameshift		18690	WP_007054041.1	PHP domain-containing protein	98.9	59.3	72.2
MGA_27	LOCUS_00270	sequence01:26009..26278(+)	frameshift		26176	WP_007053292.1	DUF3052 domain-containing protein	62.9	40.6	83.9
MGA_28	LOCUS_00280	sequence01:26266..26424(+)	frameshift		26176	WP_004112197.1	DUF3052 domain-containing protein	100.0	37.1	86.5
MGA_29	LOCUS_00290	sequence01:26928..28631(+)	partial			WP_007053293.1	DivIVA domain-containing protein	72.0	69.0	38.6
MGA_31	LOCUS_00310	sequence01:30020..30313(+)	frameshift		30295	WP_003812233.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	86.6	21.0	83.3
MGA_32	LOCUS_00320	sequence01:30310..31203(+)	frameshift		30295	WP_007054049.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	99.0	72.7	88.5
MGA_34	LOCUS_00340	sequence01:31702..33039(+)	frameshift		31567	WP_011067955.1	alpha/beta hydrolase	99.3	77.4	57.4
MGA_39	LOCUS_00390	sequence01:36777..37814(-)	frameshift		37822	WP_008782652.1	glycoside hydrolase family 32 protein	100.0	66.4	69.5
MGA_40	LOCUS_00400	sequence01:37811..38344(-)	frameshift		37825	WP_008782652.1	glycoside hydrolase family 32 protein	94.9	32.4	74.4
MGA_52	LOCUS_00520	sequence01:51424..51954(+)	partial			WP_003812197.1	signal peptidase II	87.5	68.4	64.9
MGA_63	LOCUS_00630	sequence01:65782..66378(+)	partial			WP_003433732.1	ABC transporter ATP-binding protein	96.0	64.8	30.5
MGA_66	LOCUS_00660	sequence01:68300..70750(-)	frameshift		70749	WP_033514771.1	ATP-dependent RNA helicase HrpA	100.0	60.3	69.4
MGA_67	LOCUS_00670	sequence01:70747..72348(-)	frameshift		70752	WP_013389653.1	ATP-dependent RNA helicase HrpA	100.0	40.3	82.0
MGA_73	LOCUS_00730	sequence01:77947..78345(+)	partial			WP_007056652.1	LysM peptidoglycan-binding domain-containing protein	64.4	73.3	35.3
MGA_76	LOCUS_00760	sequence01:80255..81814(-)	frameshift		81825	WP_013363236.1	AAA family ATPase	100.0	69.2	62.7
MGA_77	LOCUS_00770	sequence01:81733..82515(-)	frameshift		81825	WP_013363236.1	AAA family ATPase	88.5	30.3	83.0
MGA_79	LOCUS_00790	sequence01:83536..83697(+)	frameshift		83536,83695	WP_007052542.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	98.1	14.5	73.1
MGA_80	LOCUS_00800	sequence01:83703..84449(+)	frameshift		83536,83695	WP_007052542.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	93.1	64.3	71.9
MGA_82	LOCUS_00820	sequence01:84981..85448(+)	frameshift		85442	WP_007052544.1	penicillin-binding protein 2	86.5	22.3	54.5
MGA_83	LOCUS_00830	sequence01:85445..86776(+)	frameshift		85442	WP_007052544.1	penicillin-binding protein 2	100.0	73.8	63.7
MGA_86	LOCUS_00860	sequence01:89291..90178(+)	frameshift		90103	WP_007052547.1	phospho-N-acetylmuramoyl-pentapeptide-transferase	92.2	73.9	77.9
MGA_87	LOCUS_00870	sequence01:90175..90396(+)	frameshift		90106	WP_007052547.1	phospho-N-acetylmuramoyl-pentapeptide-transferase	97.3	19.3	74.6
MGA_89	LOCUS_00890	sequence01:91945..92703(+)	frameshift		92646	WP_013389663.1	putative peptidoglycan glycosyltransferase FtsW	84.1	45.5	40.1
MGA_90	LOCUS_00900	sequence01:92670..93326(+)	frameshift		92646	WP_013389663.1	putative peptidoglycan glycosyltransferase FtsW	100.0	49.3	57.5
MGA_103	LOCUS_01020	sequence01:107714..107923(-)	partial			WP_032736338.1	hypothetical protein	75.4	16.0	51.9
MGA_107	LOCUS_01060	sequence01:113603..113968(+)	partial			WP_007054435.1	hypothetical protein	52.1	62.3	57.6
MGA_114	LOCUS_01130	sequence01:120074..120580(+)	frameshift		120463	WP_003817101.1	translation initiation factor IF-3	75.6	55.0	96.9
MGA_115	LOCUS_01140	sequence01:120529..120747(+)	frameshift,internal_stop_codon	120746..120748(+)	120763,120463	WP_013399724.1	translation initiation factor IF-3	40.3	11.9	89.7
MGA_125	LOCUS_01240	sequence01:129722..130465(+)	frameshift		130432	WP_011068024.1	prephenate dehydrogenase/arogenate dehydrogenase family protein	82.2	57.5	64.7
MGA_126	LOCUS_01250	sequence01:130462..130833(+)	frameshift		130432	WP_013389692.1	prephenate dehydrogenase/arogenate dehydrogenase family protein	95.1	33.0	48.7
MGA_133	LOCUS_01320	sequence01:135781..135999(-)	frameshift		135846	WP_011068169.1	hypothetical protein	70.8	19.6	51.0
MGA_134	LOCUS_01330	sequence01:137182..139317(-)	frameshift		139331	WP_003857914.1	FtsX-like permease family protein	59.4	48.8	30.2
MGA_147	LOCUS_01460	sequence01:153274..154056(-)	partial			WP_000925933.1	MerR family transcriptional regulator	70.0	64.9	29.7
MGA_155	LOCUS_01540	sequence01:163152..164426(+)	partial			WP_000677374.1	NTPase	91.7	56.9	35.4
MGA_160	LOCUS_01590	sequence01:166819..167091(+)	frameshift		166759	WP_007052116.1	isochorismatase family protein	94.4	41.7	55.3
MGA_169	LOCUS_01680	sequence01:177407..177700(-)	frameshift		177720	WP_003815463.1	GTP pyrophosphokinase family protein	90.7	36.4	88.6
MGA_170	LOCUS_01690	sequence01:177697..178128(-)	frameshift		177720	WP_003815463.1	GTP pyrophosphokinase family protein	95.8	58.3	69.5
MGA_173	LOCUS_01720	sequence01:179854..180054(+)	frameshift		179962,179794	WP_013390091.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	54.5	11.0	80.6
MGA_174	LOCUS_01730	sequence01:179973..180734(+)	frameshift		179962,179794	WP_007052636.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	98.8	76.2	78.8
MGA_190	LOCUS_01890	sequence01:200195..201685(+)	partial			WP_007055162.1	RNA polymerase sigma factor	69.4	72.2	92.2
MGA_191	LOCUS_01900	sequence01:201813..202289(+)	frameshift		202226,202253	WP_003813771.1	DNA topoisomerase IV subunit B	88.0	18.1	94.2
MGA_192	LOCUS_01910	sequence01:202264..203331(+)	frameshift		203328,202256,202724,202229,202682	WP_003813771.1	DNA topoisomerase IV subunit B	100.0	45.5	67.6
MGA_193	LOCUS_01920	sequence01:203340..204137(+)	frameshift		203328	WP_011068045.1	DNA topoisomerase IV subunit B	100.0	34.3	87.2
MGA_199	LOCUS_01980	sequence01:210371..210811(-)	frameshift		211001,210839	WP_063739097.1	LacI family DNA-binding transcriptional regulator	97.9	41.0	48.3
MGA_200	LOCUS_01990	sequence01:210999..211385(-)	frameshift		211004,210839	WP_063739097.1	LacI family DNA-binding transcriptional regulator	95.3	35.0	41.0
MGA_213	LOCUS_02120	sequence01:235094..236095(-)	frameshift		236145	WP_101886402.1	septation protein SepH	98.5	70.0	31.9
MGA_223	LOCUS_02220	sequence01:243805..244848(+)	frameshift		243665,243779	WP_007052046.1	methionine ABC transporter ATP-binding protein	88.2	75.6	71.9
MGA_226	LOCUS_02250	sequence01:247004..247489(+)	frameshift		247402,247519	WP_007052049.1	NAD+ synthase	83.9	23.9	77.8
MGA_227	LOCUS_02260	sequence01:247575..248657(+)	frameshift		247402,247522	WP_007052049.1	NAD+ synthase	100.0	63.7	77.2
MGA_229	LOCUS_02280	sequence01:249606..250688(+)	frameshift		250674,249381	WP_003819332.1	formate C-acetyltransferase	96.1	43.7	90.5
MGA_230	LOCUS_02290	sequence01:250685..251668(+)	frameshift		250673	WP_004112605.1	formate C-acetyltransferase	100.0	41.3	93.9
MGA_232	LOCUS_02310	sequence01:252839..253870(+)	frameshift		253645	WP_011068215.1	HRDC domain-containing protein	81.9	64.7	68.7
MGA_233	LOCUS_02320	sequence01:253864..254133(+)	frameshift		253645	WP_011068215.1	HRDC domain-containing protein	100.0	20.6	59.6
MGA_235	LOCUS_02340	sequence01:255742..257088(+)	partial			WP_011068213.1	chloride channel protein	78.6	71.9	50.7
MGA_244	LOCUS_02430	sequence01:266482..267615(-)	partial			WP_011068209.1	DNA-processing protein DprA	91.8	60.6	50.0
MGA_257	LOCUS_02560	sequence01:283615..283788(+)	frameshift		283767	WP_008783010.1	pyrroline-5-carboxylate reductase	86.0	18.4	65.3
MGA_258	LOCUS_02570	sequence01:283767..284408(+)	frameshift		283767	WP_008783010.1	pyrroline-5-carboxylate reductase	99.1	79.3	72.5
MGA_259	LOCUS_02580	sequence01:284497..285087(+)	frameshift		284973	WP_003813598.1	redox-regulated ATPase YchF	81.1	43.7	96.2
MGA_260	LOCUS_02590	sequence01:284976..285593(+)	frameshift		284973	WP_003813598.1	redox-regulated ATPase YchF	99.5	56.0	84.8
MGA_276	LOCUS_02750	sequence01:305153..306277(-)	frameshift		306318	WP_011948746.1	ferrous iron transport protein B	96.0	56.4	34.7
MGA_277	LOCUS_02760	sequence01:306286..307239(-)	frameshift		306324	WP_012640041.1	ferrous iron transport protein B	76.7	37.4	37.1
MGA_280	LOCUS_02790	sequence01:309390..309854(+)	partial			WP_162098249.1	glycosyltransferase	87.7	27.1	47.4
MGA_283	LOCUS_02820	sequence01:313638..314096(-)	frameshift		314101	WP_013389746.1	glycoside hydrolase family 3 N-terminal domain-containing protein	98.0	34.8	58.4
MGA_284	LOCUS_02830	sequence01:314060..314929(-)	frameshift		314101	WP_011068259.1	glycoside hydrolase family 3 N-terminal domain-containing protein	67.5	48.2	59.5
MGA_288	LOCUS_02870	sequence01:319578..322361(+)	frameshift		322241	WP_013389755.1	transcription-repair coupling factor	96.1	74.2	73.2
MGA_289	LOCUS_02880	sequence01:322244..323164(+)	frameshift		322244	WP_013389755.1	transcription-repair coupling factor	99.7	25.4	79.7
MGA_291	LOCUS_02900	sequence01:324038..324586(-)	frameshift		324588	WP_004111826.1	NrtA/SsuA/CpmA family ABC transporter substrate-binding protein	99.5	54.5	61.5
MGA_292	LOCUS_02910	sequence01:324511..325002(-)	frameshift		324588	WP_004111826.1	NrtA/SsuA/CpmA family ABC transporter substrate-binding protein	84.0	43.7	50.0
MGA_296	LOCUS_02950	sequence01:328006..328257(+)	frameshift		327931	WP_013582483.1	septum formation initiator family protein	100.0	48.3	38.8
MGA_300	LOCUS_02990	sequence01:330821..332068(+)	frameshift		332056	WP_007055100.1	L-serine ammonia-lyase	100.0	84.4	62.9
MGA_301	LOCUS_03000	sequence01:332059..332295(+)	frameshift		332056	WP_007055100.1	L-serine ammonia-lyase	100.0	16.0	84.6
MGA_305	LOCUS_03040	sequence01:334670..335581(+)	frameshift		334592,335543	WP_007051898.1	PAS domain-containing sensor histidine kinase	96.4	59.0	70.2
MGA_306	LOCUS_03050	sequence01:335569..336057(+)	frameshift		335545	WP_013389763.1	PAS domain-containing sensor histidine kinase	100.0	32.7	84.6
MGA_309	LOCUS_03080	sequence01:338386..339324(-)	partial			WP_011068246.1	LCP family protein	97.8	64.4	59.3
MGA_314	LOCUS_03130	sequence01:346205..346525(-)	partial			WP_023658181.1	metallopeptidase family protein	100.0	74.6	74.5
MGA_317	LOCUS_03160	sequence01:348308..348631(-)	internal_stop_codon	348671..348673(-)		WP_013389772.1	HAMP domain-containing sensor histidine kinase	91.6	26.4	54.1
MGA_318	LOCUS_03170	sequence01:348671..349327(-)	internal_stop_codon	348671..348673(-)		WP_007053568.1	HAMP domain-containing sensor histidine kinase	100.0	61.1	62.4
MGA_321	LOCUS_03200	sequence01:352558..352809(+)	frameshift		352803	WP_180947098.1	CarD family transcriptional regulator	98.8	41.4	82.9
MGA_322	LOCUS_03210	sequence01:352806..353153(+)	frameshift		352803	WP_003812708.1	CarD family transcriptional regulator	100.0	58.1	80.0
MGA_336	LOCUS_03350	sequence01:367435..368250(+)	frameshift		368133	WP_013389778.1	DNA polymerase I	86.7	24.9	77.4
MGA_337	LOCUS_03360	sequence01:368196..370307(+)	frameshift		368133	WP_011068236.1	DNA polymerase I	100.0	73.2	56.6
MGA_340	LOCUS_03390	sequence01:372024..372665(+)	frameshift		372653	WP_004118272.1	glycogen debranching protein GlgX	100.0	29.9	81.2
MGA_341	LOCUS_03400	sequence01:372662..374143(+)	frameshift		372662	WP_007055470.1	glycogen debranching protein GlgX	98.6	68.8	82.5
MGA_344	LOCUS_03430	sequence01:377308..377820(-)	frameshift		377837	WP_013363379.1	acetate kinase	98.8	41.1	81.0
MGA_345	LOCUS_03440	sequence01:377772..378530(-)	frameshift		377837	WP_013363379.1	acetate kinase	91.7	56.5	83.1
MGA_348	LOCUS_03470	sequence01:383602..383931(+)	frameshift		383916	WP_013399520.1	glutamine-hydrolyzing GMP synthase	97.2	20.4	90.6
MGA_349	LOCUS_03480	sequence01:383928..385163(+)	frameshift		383919	WP_007057943.1	glutamine-hydrolyzing GMP synthase	99.8	78.8	88.5
MGA_351	LOCUS_03500	sequence01:385929..386174(-)	frameshift		386311	WP_011016570.1	ATP-binding protein	96.3	17.6	50.0
MGA_352	LOCUS_03510	sequence01:386176..387171(-)	frameshift		386960,386985,386462,386312	WP_011462283.1	ATP-binding protein	68.9	54.9	36.8
MGA_357	LOCUS_03560	sequence01:392534..393004(-)	frameshift		393039	WP_007057285.1	xanthine phosphoribosyltransferase	100.0	80.8	82.7
MGA_362	LOCUS_03610	sequence01:398210..398548(+)	frameshift		398210	WP_003812859.1	DUF948 domain-containing protein	98.2	83.1	72.6
MGA_378	LOCUS_03770	sequence01:421176..422465(+)	frameshift		421125	WP_007052144.1	L,D-transpeptidase	99.8	79.7	47.2
MGA_383	LOCUS_03820	sequence01:427576..428022(+)	frameshift		428001	WP_004111886.1	MFS transporter	96.6	33.9	76.6
MGA_384	LOCUS_03830	sequence01:428025..428858(+)	frameshift		428004	WP_004111886.1	MFS transporter	100.0	64.5	69.4
MGA_392	LOCUS_03910	sequence01:436284..436616(+)	frameshift		436595	WP_007052150.1	metal-sulfur cluster assembly factor	92.7	52.8	52.4
MGA_393	LOCUS_03920	sequence01:436613..436873(+)	frameshift		436595	WP_003812893.1	metal-sulfur cluster assembly factor	100.0	44.3	91.9
MGA_395	LOCUS_03940	sequence01:438127..438264(-)	frameshift		438159	WP_007052151.1	glucose-1-phosphate adenylyltransferase	68.9	7.5	100.0
MGA_423	LOCUS_04220	sequence01:472223..473008(+)	frameshift		472903	WP_004111779.1	methylenetetrahydrofolate reductase [NAD(P)H]	87.0	79.9	70.5
MGA_438	LOCUS_04370	sequence01:488311..489330(-)	partial			WP_071740748.1	DUF4020 domain-containing protein	98.5	27.2	33.6
MGA_441	LOCUS_04400	sequence01:494189..494530(-)	internal_stop_codon	494576..494578(-)		WP_010939304.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	86.7	9.3	38.9
MGA_442	LOCUS_04410	sequence01:494576..495310(-)	internal_stop_codon	494576..494578(-)		WP_010939304.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	100.0	21.7	45.8
MGA_443	LOCUS_04420	sequence01:495406..497748(-)	frameshift,internal_stop_codon	495406..495408(-)	495393	WP_010939304.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	99.7	64.8	42.1
MGA_445	LOCUS_04440	sequence01:498419..500122(-)	frameshift,internal_stop_codon	500138..500140(-)	498454	WP_205228200.1	BREX system P-loop protein BrxC	98.2	46.0	27.4
MGA_446	LOCUS_04450	sequence01:500138..501391(-)	internal_stop_codon	500138..500140(-)		WP_176947249.1	BREX system P-loop protein BrxC	97.4	33.0	44.5
MGA_453	LOCUS_04520	sequence01:505532..505894(-)	frameshift		505893	WP_003813143.1	LysR family transcriptional regulator	99.2	38.8	86.6
MGA_454	LOCUS_04530	sequence01:505891..506457(-)	frameshift		505896	WP_003813143.1	LysR family transcriptional regulator	100.0	61.2	93.6
MGA_458	LOCUS_04570	sequence01:509883..511292(-)	frameshift		511285	WP_007052234.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	97.7	77.0	52.9
MGA_474	LOCUS_04730	sequence01:529533..529823(+)	partial			WP_003813271.1	preprotein translocase subunit SecG	65.6	76.8	77.8
MGA_482	LOCUS_04810	sequence01:539669..541369(-)	frameshift		541380	WP_060618669.1	hypothetical protein	97.2	65.2	63.9
MGA_483	LOCUS_04820	sequence01:541366..542208(-)	frameshift		541383	WP_013389901.1	excinuclease ABC subunit A	97.1	32.7	65.9
MGA_485	LOCUS_04840	sequence01:543363..544022(-)	frameshift		544045	WP_003813243.1	PAC2 family protein	99.5	78.3	52.3
MGA_489	LOCUS_04880	sequence01:547638..548651(+)	partial			WP_011142886.1	pentapeptide repeat-containing protein	48.1	33.7	33.3
MGA_497	LOCUS_04950	sequence01:555852..556325(-)	partial			WP_152234455.1	hypothetical protein	98.7	20.2	38.4
MGA_499	LOCUS_04970	sequence01:557983..559410(+)	partial			WP_041272166.1	DNA cytosine methyltransferase	24.2	17.6	36.2
MGA_505	LOCUS_05030	sequence01:564047..564964(-)	partial			WP_010887311.1	IS200/IS605 family element RNA-guided endonuclease TnpB	82.6	62.3	32.3
MGA_520	LOCUS_05170	sequence02:3402..4373(-)	partial			WP_011068518.1	class C sortase	76.2	66.8	40.9
MGA_530	LOCUS_05270	sequence02:16069..16515(-)	internal_stop_codon	16069..16071(-)		WP_013389567.1	HNH endonuclease family protein	97.3	52.5	43.8
MGA_542	LOCUS_05390	sequence02:22247..22606(-)	partial			WP_003900449.1	type II toxin-antitoxin system RelE/ParE family toxin	94.1	55.2	49.1
MGA_549	LOCUS_05460	sequence02:28598..29329(-)	partial			WP_011068089.1	LPXTG cell wall anchor domain-containing protein	99.6	16.2	46.9
MGA_550	LOCUS_05470	sequence02:29224..32766(-)	frameshift		29853	WP_009993957.1	LPXTG cell wall anchor domain-containing protein	46.0	47.7	55.9
MGA_551	LOCUS_05480	sequence02:33079..34137(-)	partial			WP_011068090.1	FIVAR domain-containing protein	56.2	58.9	41.9
MGA_582	LOCUS_05790	sequence02:52990..54555(+)	partial			WP_011037109.1	flagellar assembly peptidoglycan hydrolase FlgJ	30.9	43.3	33.9
MGA_613	LOCUS_06100	sequence02:89985..90947(+)	partial			WP_013390308.1	class C sortase	76.9	74.2	41.3
MGA_614	LOCUS_06110	sequence02:91088..92539(+)	partial			WP_000942660.1	RNA-guided endonuclease TnpB family protein	45.3	47.6	27.6
MGA_629	LOCUS_06260	sequence03:12653..13258(+)	partial			WP_003814882.1	single-stranded DNA-binding protein	74.1	62.9	46.0
MGA_631	LOCUS_06280	sequence03:15831..16448(+)	partial			WP_003814886.1	HdeD family acid-resistance protein	94.1	66.1	59.8
MGA_664	LOCUS_06610	sequence03:48963..49253(+)	frameshift		49235	WP_007057142.1	DNA (cytosine-5-)-methyltransferase	97.9	29.1	70.2
MGA_665	LOCUS_06620	sequence03:49331..50047(+)	frameshift		49238	WP_007057142.1	DNA (cytosine-5-)-methyltransferase	77.7	51.4	58.1
MGA_667	LOCUS_06640	sequence03:52396..53154(-)	frameshift		52410,52587	WP_044008002.1	AIPR family protein	71.8	30.7	36.7
MGA_672	LOCUS_06690	sequence03:55161..55886(-)	partial			WP_013383504.1	Z1 domain-containing protein	64.7	16.0	26.2
MGA_673	LOCUS_06700	sequence03:55952..57559(-)	partial			WP_013383504.1	Z1 domain-containing protein	72.5	40.8	33.7
MGA_697	LOCUS_06930	sequence04:16489..17361(-)	partial			WP_011068791.1	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	54.5	33.8	43.4
MGA_705	LOCUS_07010	sequence04:26824..27717(-)	frameshift		27782	WP_013390181.1	AI-2E family transporter	99.3	59.6	54.5
MGA_706	LOCUS_07020	sequence04:27624..28370(-)	frameshift		27782	WP_013390181.1	AI-2E family transporter	76.2	35.4	59.8
MGA_710	LOCUS_07060	sequence05:509..1096(+)	partial			WP_011068291.1	MarR family winged helix-turn-helix transcriptional regulator	76.4	70.5	40.9
MGA_711	LOCUS_07070	sequence05:1080..1505(+)	frameshift		1469	WP_007053635.1	hypothetical protein	75.2	42.9	62.3
MGA_712	LOCUS_07080	sequence05:1481..1837(+)	frameshift		1469	WP_007053635.1	hypothetical protein	100.0	47.8	57.6
MGA_720	LOCUS_07160	sequence05:13122..13736(-)	partial			WP_013363192.1	MarR family transcriptional regulator	65.7	76.3	45.9
MGA_724	LOCUS_07200	sequence05:17067..17735(-)	partial			WP_011476638.1	Fic family protein	80.6	73.4	29.6
MGA_725	LOCUS_07210	sequence05:18484..18747(-)	partial			WP_164926117.1	type I-E CRISPR-associated endoribonuclease Cas2e	77.0	54.4	38.2
MGA_727	LOCUS_07230	sequence05:19829..20068(-)	frameshift,internal_stop_codon	20065..20067(-)	20043	WP_013227610.1	type I-E CRISPR-associated protein Cas6/Cse3/CasE	78.5	29.2	42.9
MGA_731	LOCUS_07270	sequence05:21615..22298(-)	frameshift		21776	WP_004138505.1	type I-E CRISPR-associated protein Cas7/Cse4/CasC	70.5	37.8	36.6
MGA_733	LOCUS_07290	sequence05:23337..24443(-)	frameshift		24469	WP_013227614.1	type I-E CRISPR-associated protein Cse1/CasA	85.1	55.1	26.6
MGA_734	LOCUS_07300	sequence05:24431..24844(-)	frameshift		24439	WP_011229116.1	type I-E CRISPR-associated protein Cse1/CasA	81.0	21.3	33.3
MGA_735	LOCUS_07310	sequence05:24831..26456(-)	frameshift		26503	WP_011674070.1	CRISPR-associated helicase/endonuclease Cas3	94.6	47.5	32.1
MGA_736	LOCUS_07320	sequence05:26453..27733(-)	frameshift		26503	WP_116440412.1	CRISPR-associated helicase Cas3'	96.5	41.8	29.6
MGA_739	LOCUS_07340	sequence06:2922..4646(+)	frameshift		2898	WP_011102048.1	BspA family leucine-rich repeat surface protein	48.1	33.3	27.9
MGA_741	LOCUS_07360	sequence06:4897..5907(+)	partial			WP_013390308.1	class C sortase	67.3	71.2	39.7
MGA_744	LOCUS_07390	sequence06:10099..11586(-)	partial			WP_012775459.1	sensor histidine kinase	58.4	57.0	26.6
MGA_745	LOCUS_07400	sequence06:11710..12462(-)	partial			WP_011948310.1	LytTR family DNA-binding domain-containing protein	74.0	78.1	31.4
MGA_750	LOCUS_07450	sequence06:18150..18635(+)	frameshift		18120,18573	WP_013389826.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	95.0	21.6	56.5
MGA_751	LOCUS_07460	sequence06:18632..19990(+)	frameshift		18575	WP_013389826.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	99.3	63.2	63.7
MGA_757	LOCUS_07520	sequence07:5573..6046(-)	frameshift		6021	WP_011068637.1	YesL family protein	70.7	55.2	62.2
MGA_761	LOCUS_07560	sequence07:9778..10401(-)	frameshift		10541	WP_013583013.1	ABC transporter substrate-binding protein	98.6	45.5	68.8
MGA_762	LOCUS_07570	sequence07:10335..11111(-)	frameshift		10541	WP_013583013.1	ABC transporter substrate-binding protein	73.3	42.2	64.6
MGA_764	LOCUS_07590	sequence07:13548..14027(-)	partial			WP_013583014.1	histidine phosphatase family protein	99.4	66.7	58.2
MGA_766	LOCUS_07610	sequence07:15157..15783(+)	frameshift		15202	WP_013390367.1	nitroreductase family protein	94.7	77.6	52.7
MGA_773	LOCUS_07670	sequence08:4469..5029(+)	frameshift		5017	WP_011068827.1	ribokinase	97.8	56.5	71.4
MGA_774	LOCUS_07680	sequence08:5068..5445(+)	frameshift		5017	WP_011068827.1	ribokinase	98.4	37.3	51.2
MGA_777	LOCUS_07710	sequence08:7085..7723(+)	partial			WP_003811755.1	single-stranded DNA-binding protein	58.0	52.4	70.7
MGA_780	LOCUS_07740	sequence08:8622..10508(-)	frameshift		10564	WP_003811744.1	zinc ribbon domain-containing protein	53.3	31.0	44.3
MGA_786	LOCUS_07800	sequence08:12674..13378(+)	partial			WP_013389495.1	zinc-ribbon domain-containing protein	98.7	55.0	52.1
MGA_799	LOCUS_07930	sequence10:3116..3916(+)	frameshift		3712	WP_000028663.1	type I restriction-modification system subunit M	71.4	35.9	44.2
MGA_800	LOCUS_07940	sequence10:3913..5745(+)	frameshift		3712	WP_011068835.1	type I restriction-modification system subunit M	100.0	69.9	38.7
MGA_801	LOCUS_07950	sequence10:5836..6153(+)	frameshift		6097,5845,6199	WP_012027693.1	restriction endonuclease subunit S	79.0	20.9	40.5
MGA_802	LOCUS_07960	sequence10:6197..6790(+)	frameshift		6896,6899,6517,6475,6749,6511	WP_101621619.1	restriction endonuclease subunit S	91.9	45.1	33.9
MGA_809	LOCUS_08030	sequence12:5919..7742(-)	partial			WP_052846817.1	Sip1-related alpha-galactosidase	66.6	60.3	30.1
MGA_813	LOCUS_08070	sequence12:11449..12369(+)	frameshift		12327	WP_007054616.1	ROK family transcriptional regulator	85.0	65.9	55.1
MGA_814	LOCUS_08080	sequence12:12414..12725(+)	frameshift		12327	WP_007054616.1	ROK family transcriptional regulator	85.4	21.9	54.5
MGA_820	LOCUS_08140	sequence12:20426..21934(+)	partial			WP_060618718.1	hypothetical protein	55.4	64.0	30.2
MGA_824	LOCUS_08180	sequence12:27049..28467(+)	partial			WP_011836827.1	polysaccharide deacetylase family protein	40.9	41.1	40.5
MGA_831	LOCUS_08250	sequence12:37361..38839(+)	partial			WP_013390384.1	ubiquitin-like domain-containing protein	57.7	56.3	56.3
MGA_838	LOCUS_08320	sequence12:44585..44944(+)	frameshift		44920	WP_173361541.1	DUF6049 family protein	74.8	12.2	38.2
MGA_839	LOCUS_08330	sequence12:44941..46677(+)	frameshift		44923	WP_017143650.1	DUF6049 family protein	99.0	80.0	40.0
MGA_840	LOCUS_08340	sequence12:47360..50635(+)	frameshift		47327	WP_013399360.1	murein biosynthesis integral membrane protein MurJ	29.1	53.6	47.0
MGA_853	LOCUS_08470	sequence12:60755..62482(+)	partial			WP_007051767.1	chromosomal replication initiator protein DnaA	68.2	77.4	68.4
MGA_855	LOCUS_08490	sequence12:64360..65037(+)	frameshift		65010	WP_013389322.1	DNA replication and repair protein RecF	94.7	54.0	61.0
MGA_856	LOCUS_08500	sequence12:65064..65561(+)	frameshift		65013	WP_007054593.1	DNA replication/repair protein RecF	84.2	33.0	63.3
MGA_864	LOCUS_08580	sequence12:74441..75241(-)	partial			WP_013390330.1	hemolysin III family protein	78.6	68.5	56.0
MGA_869	LOCUS_08630	sequence12:82487..83884(+)	partial			WP_013390034.1	PASTA domain-containing protein	31.4	19.7	29.1
MGA_872	LOCUS_08660	sequence12:86507..88168(+)	partial			WP_003546145.1	TerB N-terminal domain-containing protein	71.6	62.5	30.3
MGA_873	LOCUS_08670	sequence12:88180..88458(+)	partial			WP_003546145.1	TerB N-terminal domain-containing protein	76.1	11.1	42.9
MGA_874	LOCUS_08680	sequence12:88468..89169(+)	frameshift		89016,89286	WP_003546148.1	ATP-binding protein	77.3	40.7	75.0
MGA_875	LOCUS_08690	sequence12:89345..89797(+)	frameshift		89288	WP_003546148.1	ATP-binding protein	100.0	33.9	61.3
MGA_877	LOCUS_08710	sequence12:92615..93109(+)	frameshift		93082	WP_011962335.1	DUF262 domain-containing protein	75.6	22.0	34.1
MGA_883	LOCUS_08770	sequence12:96809..97687(-)	frameshift		97704	WP_013583013.1	ABC transporter substrate-binding protein	92.8	60.9	50.4
MGA_884	LOCUS_08780	sequence12:97684..98169(-)	frameshift		97701	WP_013399402.1	ABC transporter substrate-binding protein	96.3	34.9	43.4
MGA_904	LOCUS_08980	sequence12:116377..116775(+)	frameshift		116769	WP_007057860.1	LacI family DNA-binding transcriptional regulator	100.0	35.6	71.2
MGA_905	LOCUS_08990	sequence12:116790..117488(+)	frameshift		116772	WP_017143236.1	LacI family DNA-binding transcriptional regulator	100.0	64.6	56.5
MGA_906	LOCUS_09000	sequence12:117560..117811(-)	partial			WP_004115879.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	67.5	73.7	46.4
MGA_908	LOCUS_09020	sequence12:119060..120091(-)	frameshift		120129	WP_011068799.1	sugar ABC transporter ATP-binding protein	99.7	66.2	84.2
MGA_909	LOCUS_09030	sequence12:120115..120615(-)	frameshift		120132	WP_011068799.1	sugar ABC transporter ATP-binding protein	97.6	31.3	87.0
MGA_910	LOCUS_09040	sequence12:120638..121003(-)	frameshift		121088,121046	WP_011068798.1	sugar ABC transporter substrate-binding protein	95.9	30.1	83.6
MGA_911	LOCUS_09050	sequence12:121020..121808(-)	frameshift		121091,121046	WP_011068798.1	sugar ABC transporter substrate-binding protein	91.6	62.3	80.1
MGA_921	LOCUS_09150	sequence12:133533..133850(+)	frameshift		133844	WP_011068576.1	threonine/serine exporter family protein	81.9	13.7	80.2
MGA_931	LOCUS_09250	sequence12:143076..143738(+)	partial			WP_003811525.1	TetR/AcrR family transcriptional regulator	24.1	27.0	49.1
MGA_932	LOCUS_09260	sequence12:143817..144980(-)	partial			WP_011068502.1	DUF805 domain-containing protein	46.0	47.8	36.3
MGA_936	LOCUS_09300	sequence12:148221..148802(-)	partial			WP_013389385.1	cell division protein CrgA	57.0	75.5	65.8
MGA_943	LOCUS_09370	sequence12:156649..156855(-)	frameshift		156696	WP_013389388.1	penicillin-binding transpeptidase domain-containing protein	82.4	11.5	73.2
MGA_948	LOCUS_09420	sequence12:161718..162230(+)	frameshift		162224,162303	WP_011068565.1	prolyl oligopeptidase family serine peptidase	88.8	16.3	45.4
MGA_949	LOCUS_09430	sequence12:162263..164269(+)	frameshift		162185	WP_011068565.1	prolyl oligopeptidase family serine peptidase	95.7	80.3	56.3
MGA_954	LOCUS_09480	sequence12:168474..168680(+)	frameshift		168331,168301	WP_001095514.1	methyltransferase domain-containing protein	91.2	22.0	45.2
MGA_956	LOCUS_09500	sequence12:172492..173499(+)	internal_stop_codon	173497..173499(+)		WP_011476621.1	LPXTG cell wall anchor domain-containing protein	67.8	50.7	26.2
MGA_968	LOCUS_09620	sequence12:190508..191443(+)	frameshift		190424	WP_010966302.1	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	99.7	80.2	47.3
MGA_975	LOCUS_09690	sequence12:197409..197948(-)	partial			WP_005808295.1	TetR/AcrR family transcriptional regulator	66.5	60.3	35.0
MGA_976	LOCUS_09700	sequence12:198142..199260(+)	partial			WP_011392662.1	hypothetical protein	34.4	38.7	30.5
MGA_982	LOCUS_09760	sequence12:203829..204269(-)	partial			WP_011202637.1	carboxymuconolactone decarboxylase family protein	91.1	48.9	63.2
MGA_1000	LOCUS_09940	sequence12:226373..227521(+)	internal_stop_codon	226361..226363(+)		WP_011068198.1	MFS transporter	99.5	80.8	51.1
MGA_1018	LOCUS_10120	sequence12:254460..255719(+)	frameshift		254304	WP_011068639.1	amino acid permease	97.1	83.3	75.6
MGA_1021	LOCUS_10150	sequence12:256870..259806(+)	partial			WP_032740909.1	FtsX-like permease family protein	76.5	61.2	53.2
MGA_1030	LOCUS_10240	sequence12:268790..269512(-)	partial			WP_002355669.1	phosphatase PAP2 family protein	57.9	64.8	35.7
MGA_1043	LOCUS_10370	sequence12:283979..284608(-)	partial			WP_010937368.1	CerR family C-terminal domain-containing protein	29.7	26.3	45.2
MGA_1046	LOCUS_10400	sequence12:287428..288414(+)	partial			WP_013225201.1	family 43 glycosylhydrolase	97.0	30.1	30.8
MGA_1062	LOCUS_10560	sequence12:300466..301608(+)	partial			WP_005110336.1	site-specific integrase	74.2	70.7	29.3
MGA_1073	LOCUS_10670	sequence12:315079..315366(+)	frameshift		315294	WP_007051560.1	glutamine amidotransferase	69.5	26.4	77.3
MGA_1074	LOCUS_10680	sequence12:315327..315842(+)	frameshift		315294	WP_003815981.1	glutamine amidotransferase	99.4	68.3	71.2
MGA_1075	LOCUS_10690	sequence12:315947..316303(+)	partial			WP_003815980.1	hypothetical protein	64.4	82.8	50.6
MGA_1082	LOCUS_10760	sequence12:326831..327601(+)	partial			WP_214304241.1	cobyric acid synthase	97.7	70.4	42.8
MGA_1086	LOCUS_10800	sequence12:330224..330502(+)	partial			WP_007051627.1	DUF4244 domain-containing protein	64.1	62.1	79.7
MGA_1094	LOCUS_10880	sequence12:337637..337990(+)	frameshift		337912	WP_007051613.1	DUF5701 family protein	76.9	43.7	85.6
MGA_1095	LOCUS_10890	sequence12:337912..338283(+)	frameshift		337912	WP_007051613.1	DUF5701 family protein	94.3	56.3	92.2
MGA_1100	LOCUS_10940	sequence12:346182..346535(+)	frameshift		346442	WP_013390327.1	type I DNA topoisomerase	73.5	8.8	84.9
MGA_1101	LOCUS_10950	sequence12:346505..347617(+)	frameshift		346442,347579	WP_013390327.1	type I DNA topoisomerase	96.8	36.9	74.4
MGA_1102	LOCUS_10960	sequence12:347704..349146(+)	frameshift		347560	WP_013582338.1	type I DNA topoisomerase	100.0	48.5	65.6
MGA_1107	LOCUS_11010	sequence12:354354..355367(+)	frameshift		355322	WP_011068506.1	formate--tetrahydrofolate ligase	95.8	64.0	88.5
MGA_1108	LOCUS_11020	sequence12:355334..355870(+)	frameshift		355322	WP_011068506.1	formate--tetrahydrofolate ligase	100.0	35.2	69.7
MGA_1128	LOCUS_11180	sequence16:2191..5244(+)	partial			WP_011674125.1	SpaA isopeptide-forming pilin-related protein	44.1	45.9	21.8
MGA_1148	LOCUS_11380	sequence16:24982..25983(+)	frameshift		25773	WP_013399386.1	sialidase family protein	59.5	23.4	43.2
MGA_1149	LOCUS_11390	sequence16:25980..27254(+)	frameshift		25773	WP_013399386.1	sialidase family protein	98.6	48.5	43.8
MGA_1160	LOCUS_11500	sequence16:39377..40045(-)	partial			WP_013389509.1	mechanosensitive ion channel family protein	84.2	72.8	51.3
MGA_1171	LOCUS_11610	sequence16:51360..59534(+)	partial			WP_011068724.1	VWA domain-containing protein	7.9	28.8	37.2
MGA_1176	LOCUS_11660	sequence16:62878..63357(-)	partial			WP_003819603.1	30S ribosomal protein S16	66.7	72.1	84.9
MGA_1177	LOCUS_11670	sequence16:63606..64238(+)	frameshift		64190	WP_013389421.1	evolved beta-galactosidase subunit alpha	92.9	16.5	57.3
MGA_1178	LOCUS_11680	sequence16:64211..65656(+)	frameshift		65632,64190	WP_013389421.1	evolved beta-galactosidase subunit alpha	89.4	30.7	52.9
MGA_1179	LOCUS_11690	sequence16:65635..67005(+)	frameshift		65632	WP_013389421.1	evolved beta-galactosidase subunit alpha	100.0	40.8	41.2
MGA_1191	LOCUS_11810	sequence16:81006..81698(-)	partial			WP_007057854.1	cell division protein	88.7	69.3	56.3
MGA_1194	LOCUS_11840	sequence16:82884..83741(-)	frameshift		83740,82933	WP_007051408.1	aldo/keto reductase	94.7	80.4	74.1
MGA_1195	LOCUS_11850	sequence16:83627..83896(-)	frameshift		83740	WP_013363756.1	aldo/keto reductase	49.4	13.1	63.6
MGA_1205	LOCUS_11950	sequence16:94888..95628(+)	partial			WP_013389561.1	signal peptidase I	82.1	74.5	62.9
MGA_1207	LOCUS_11970	sequence16:96479..97429(+)	partial			WP_010081272.1	ABC transporter ATP-binding protein	65.5	58.0	72.5
MGA_1213	LOCUS_12030	sequence16:102351..105116(+)	partial			WP_013389484.1	Rne/Rng family ribonuclease	71.3	67.7	76.9
MGA_1215	LOCUS_12050	sequence16:107702..108214(+)	partial			WP_003695998.1	DUF4065 domain-containing protein	70.0	67.6	33.6
MGA_1219	LOCUS_12090	sequence16:112062..112658(+)	frameshift		112616	WP_011837256.1	class C sortase	76.3	50.8	52.9
MGA_1220	LOCUS_12100	sequence16:112640..113014(+)	frameshift		112616	WP_012027974.1	class C sortase	79.8	34.7	45.5
MGA_1234	LOCUS_12240	sequence16:128951..129769(-)	partial			WP_007052980.1	biotin transporter BioY	49.3	66.8	48.5
MGA_1238	LOCUS_12280	sequence16:143196..143720(+)	partial			WP_013390268.1	4'-phosphopantetheinyl transferase superfamily protein	59.2	52.9	58.3
MGA_1246	LOCUS_12360	sequence16:154678..155457(+)	frameshift		154627	WP_013227578.1	sugar ABC transporter permease	98.1	81.2	34.1
MGA_1248	LOCUS_12380	sequence16:156370..159288(+)	partial			WP_011922168.1	family 16 glycosylhydrolase	83.7	57.5	54.5
MGA_1254	LOCUS_12440	sequence16:166685..166870(-)	partial			WP_007051803.1	glutaredoxin family protein	88.5	61.4	48.1
MGA_1260	LOCUS_12500	sequence16:173273..174685(+)	frameshift		173237	WP_013390255.1	cell division protein	74.3	71.5	70.2
MGA_1261	LOCUS_12510	sequence16:175089..177512(+)	partial			WP_211477941.1	SpaA isopeptide-forming pilin-related protein	33.7	18.7	25.7
MGA_1264	LOCUS_12540	sequence16:179628..180008(+)	frameshift		179963	WP_009993870.1	class C sortase	57.9	19.1	41.1
MGA_1265	LOCUS_12550	sequence16:180008..180571(+)	frameshift		179963	WP_009993870.1	class C sortase	89.3	44.5	61.8
MGA_1271	LOCUS_12610	sequence16:186828..187196(+)	frameshift		187178	WP_011068423.1	phosphate ABC transporter permease subunit PstC	82.8	32.5	64.1
MGA_1272	LOCUS_12620	sequence16:187190..187795(+)	frameshift		187178	WP_011068423.1	phosphate ABC transporter permease subunit PstC	99.5	63.1	79.5
MGA_1279	LOCUS_12690	sequence16:194607..196304(+)	partial			WP_013390240.1	FHA domain-containing protein	52.7	50.5	38.1
MGA_1299	LOCUS_12890	sequence17:7694..8668(+)	frameshift		7649	WP_011922179.1	low temperature requirement protein A	88.3	75.5	28.6
MGA_1303	LOCUS_12930	sequence17:10464..10841(+)	partial			WP_004117652.1	DUF3021 family protein	78.4	65.8	31.6
MGA_1307	LOCUS_12970	sequence17:15742..16152(+)	frameshift		16101	WP_003813946.1	5-(carboxyamino)imidazole ribonucleotide synthase	89.0	31.1	76.0
MGA_1308	LOCUS_12980	sequence17:16149..16892(+)	frameshift		16095	WP_007051237.1	5-(carboxyamino)imidazole ribonucleotide synthase	100.0	64.0	74.1
MGA_1316	LOCUS_13060	sequence17:26710..27582(-)	frameshift		27590	WP_007051228.1	amidophosphoribosyltransferase	93.1	53.7	85.9
MGA_1317	LOCUS_13070	sequence17:27579..28256(-)	frameshift		27590	WP_007051228.1	amidophosphoribosyltransferase	98.7	44.1	85.1
MGA_1319	LOCUS_13090	sequence17:30026..30472(+)	partial			WP_003813910.1	hypothetical protein	38.5	79.2	59.6
MGA_1323	LOCUS_13130	sequence17:32943..33170(+)	partial			WP_017143394.1	permease	100.0	18.9	52.0
MGA_1328	LOCUS_13180	sequence17:39788..40195(-)	frameshift		39796	WP_011068298.1	phosphoribosylformylglycinamidine synthase	98.5	10.7	77.4
MGA_1330	LOCUS_13200	sequence17:41159..42127(-)	frameshift		42132	WP_013390100.1	formate-dependent phosphoribosylglycinamide formyltransferase	99.4	75.6	69.3
MGA_1331	LOCUS_13210	sequence17:42559..43320(+)	frameshift		43260	WP_007051205.1	glycosyltransferase	85.4	56.0	64.4
MGA_1332	LOCUS_13220	sequence17:43419..43769(+)	frameshift		43260	WP_013390098.1	glycosyltransferase	94.0	27.5	69.7
MGA_1342	LOCUS_13320	sequence17:53174..53704(+)	partial			WP_003819348.1	transcription antitermination factor NusB	75.6	59.6	76.7
MGA_1344	LOCUS_13340	sequence17:54996..57062(+)	frameshift		56912,56891	WP_007056239.1	carbamoyl-phosphate synthase large subunit	92.3	56.3	91.7
MGA_1345	LOCUS_13350	sequence17:56975..58402(+)	frameshift		56912,56891	WP_013363691.1	carbamoyl-phosphate synthase large subunit	97.5	41.1	87.5
MGA_1368	LOCUS_13580	sequence17:84519..85049(-)	frameshift		85048	WP_007053180.1	VWA domain-containing protein	100.0	50.3	61.6
MGA_1369	LOCUS_13590	sequence17:85046..85576(-)	frameshift		85048	WP_007053180.1	VWA domain-containing protein	100.0	49.4	59.7
MGA_1375	LOCUS_13650	sequence17:89454..89699(+)	partial			WP_007055622.1	LytR C-terminal domain-containing protein	100.0	35.2	53.1
MGA_1376	LOCUS_13660	sequence17:90093..90269(+)	partial			WP_003816407.1	cold-shock protein	77.6	67.2	64.4
MGA_1379	LOCUS_13690	sequence17:92689..93651(+)	partial			WP_011067905.1	TPM domain-containing protein	58.8	68.7	43.1
MGA_1393	LOCUS_13830	sequence17:111256..111450(+)	frameshift		111438	WP_003819283.1	ABC transporter permease subunit	95.3	27.1	78.7
MGA_1394	LOCUS_13840	sequence17:111441..111932(+)	frameshift		111438	WP_007053211.1	ABC transporter permease subunit	100.0	72.4	90.8
MGA_1398	LOCUS_13880	sequence17:116851..117489(+)	frameshift		117465	WP_011067922.1	replication-associated recombination protein A	90.1	41.6	82.7
MGA_1399	LOCUS_13890	sequence17:117486..118418(+)	frameshift		117468	WP_013389730.1	replication-associated recombination protein A	85.2	56.8	69.2
MGA_1401	LOCUS_13910	sequence17:119969..120400(-)	frameshift		120402	WP_013389514.1	AMP-dependent synthetase/ligase	97.9	23.0	80.0
MGA_1402	LOCUS_13920	sequence17:120397..121860(-)	frameshift		120405	WP_013389514.1	AMP-dependent synthetase/ligase	96.1	76.6	65.8
MGA_1415	LOCUS_14050	sequence17:134062..134460(-)	partial			WP_010970704.1	phosphonate ABC transporter ATP-binding protein	82.6	38.5	33.6
MGA_1428	LOCUS_14180	sequence17:154457..154876(+)	frameshift		154834	WP_013389743.1	hypothetical protein	89.2	33.9	54.8
MGA_1429	LOCUS_14190	sequence17:154852..155529(+)	frameshift		154837	WP_013389743.1	hypothetical protein	98.2	59.3	43.9
MGA_1430	LOCUS_14200	sequence17:155529..156155(+)	partial			WP_013389744.1	ATP-binding cassette domain-containing protein	96.6	73.9	87.1
MGA_1441	LOCUS_14300	sequence18:1809..2390(-)	partial			WP_011963638.1	type II CRISPR-associated endonuclease Cas1	69.4	44.3	39.1
MGA_1446	LOCUS_14350	sequence18:7889..9706(-)	frameshift		9810	WP_013389608.1	acyl-CoA dehydratase activase-related protein	97.0	39.5	65.4
MGA_1447	LOCUS_14360	sequence18:9790..12750(-)	frameshift		9810	WP_013389608.1	acyl-CoA dehydratase activase-related protein	96.0	57.8	82.9
MGA_1463	LOCUS_14520	sequence18:28633..29466(-)	frameshift		29477	WP_007051299.1	phosphoglucosamine mutase	100.0	60.1	88.1
MGA_1464	LOCUS_14530	sequence18:29463..29996(-)	frameshift		29474	WP_003812074.1	phosphoglucosamine mutase	98.9	38.6	86.0
MGA_1472	LOCUS_14610	sequence18:39641..40216(-)	frameshift		40232,40329	WP_013389592.1	MFS transporter	98.4	39.6	54.3
MGA_1473	LOCUS_14620	sequence18:40159..41043(-)	frameshift		40232,40329	WP_013389592.1	MFS transporter	76.5	47.7	71.6
MGA_1474	LOCUS_14630	sequence18:41040..41369(-)	frameshift		41452	WP_013399735.1	GNAT family N-acetyltransferase	89.9	43.9	44.9
MGA_1476	LOCUS_14650	sequence18:42026..44929(-)	frameshift		44946	WP_011068346.1	ATP-dependent DNA helicase	99.5	72.1	40.7
MGA_1477	LOCUS_14660	sequence18:44848..45234(-)	frameshift		44945,45245	WP_011068346.1	ATP-dependent DNA helicase	83.6	8.2	64.9
MGA_1481	LOCUS_14700	sequence18:58113..59240(+)	partial			WP_013389586.1	MoxR family ATPase	89.3	59.5	63.9
MGA_1483	LOCUS_14720	sequence18:60486..62189(+)	internal_stop_codon	62187..62189(+)		WP_011068348.1	transglutaminase domain-containing protein	92.8	62.5	50.0
MGA_1484	LOCUS_14730	sequence18:62190..62942(+)	internal_stop_codon	62187..62189(+)		WP_013389584.1	transglutaminase domain-containing protein	100.0	27.4	46.6
MGA_1485	LOCUS_14740	sequence18:63083..63595(+)	frameshift		63041	WP_003816173.1	hypothetical protein	99.4	81.8	38.5
MGA_1488	LOCUS_14770	sequence18:68948..71494(-)	frameshift		71730	WP_013399741.1	DNA-directed RNA polymerase subunit beta	100.0	71.4	92.8
MGA_1489	LOCUS_14780	sequence18:71530..72507(-)	frameshift		71733	WP_007053735.1	DNA-directed RNA polymerase subunit beta	81.2	22.2	88.3
MGA_1495	LOCUS_14840	sequence18:77656..78219(-)	frameshift		78254	WP_011837256.1	class C sortase	97.3	60.3	44.3
MGA_1498	LOCUS_14870	sequence18:83953..85005(-)	frameshift		85118	WP_013363154.1	galactose-1-phosphate uridylyltransferase	99.1	83.2	88.5
MGA_1500	LOCUS_14890	sequence18:86126..87139(-)	partial			WP_011027779.1	polyprenol monophosphomannose synthase	83.4	74.5	39.5
MGA_1511	LOCUS_15000	sequence18:99492..100043(-)	frameshift		100033	WP_003811988.1	DUF2183 domain-containing protein	98.4	39.9	76.1
MGA_1512	LOCUS_15010	sequence18:100013..100951(-)	frameshift		100033	WP_007057650.1	DUF2183 domain-containing protein	76.3	52.8	48.7
MGA_1515	LOCUS_15040	sequence18:102577..103323(-)	frameshift		103313	WP_003811981.1	alpha/beta hydrolase	91.1	79.6	60.2
MGA_1516	LOCUS_15050	sequence18:103221..103487(-)	frameshift		103313	WP_007051340.1	alpha/beta hydrolase	72.7	21.8	42.2
MGA_1529	LOCUS_15180	sequence18:113973..114983(+)	partial			WP_011201897.1	glycosyltransferase family 2 protein	70.8	66.9	29.2
MGA_1531	LOCUS_15200	sequence18:115323..115955(+)	frameshift		115296	WP_011101280.1	capsular polysaccharide synthesis protein	89.0	57.3	35.6
MGA_1535	LOCUS_15240	sequence18:120688..121023(-)	frameshift		121042,121270	WP_011101283.1	DUF4422 domain-containing protein	97.3	41.9	47.2
MGA_1536	LOCUS_15250	sequence18:121250..121540(-)	frameshift		121042,121270	WP_011101283.1	DUF4422 domain-containing protein	66.7	25.2	53.8
MGA_1539	LOCUS_15280	sequence18:123765..124832(+)	frameshift		124793	WP_013582382.1	MDR family MFS transporter	80.8	55.4	67.9
MGA_1540	LOCUS_15290	sequence18:124859..125464(+)	frameshift		124793	WP_003811972.1	MDR family MFS transporter	96.0	34.2	64.2
MGA_1550	LOCUS_15390	sequence18:136553..137386(-)	partial			WP_008767764.1	sialate O-acetylesterase	91.3	42.3	31.2
MGA_1558	LOCUS_15470	sequence18:146565..146807(-)	frameshift		146824	WP_008767582.1	beta-1,6-N-acetylglucosaminyltransferase	86.2	20.8	43.5
MGA_1560	LOCUS_15490	sequence18:147075..147491(-)	frameshift		147128,147122,146822	WP_008767582.1	beta-1,6-N-acetylglucosaminyltransferase	79.0	34.2	50.9
MGA_1563	LOCUS_15520	sequence18:149307..150077(-)	frameshift,internal_stop_codon	149477..149479(-)	149386,149543	WP_011202937.1	lipopolysaccharide biosynthesis protein	65.2	35.1	28.4
MGA_1566	LOCUS_15550	sequence18:152507..152956(-)	frameshift		153048	WP_060618734.1	DUF4012 domain-containing protein	99.3	24.7	49.3
MGA_1567	LOCUS_15560	sequence18:152977..153318(-)	frameshift		153050,153332	WP_060618734.1	DUF4012 domain-containing protein	81.4	15.4	53.3
MGA_1568	LOCUS_15570	sequence18:153315..153593(-)	frameshift		153328,153811,153796,153748,153046,153724	WP_060618734.1	DUF4012 domain-containing protein	94.6	14.8	62.1
MGA_1574	LOCUS_15630	sequence19:7401..7988(-)	partial			WP_003819800.1	DUF4190 domain-containing protein	68.2	57.0	43.2
MGA_1581	LOCUS_15700	sequence19:17018..17272(+)	partial			WP_003813393.1	DUF488 domain-containing protein	96.4	68.1	54.3
MGA_1587	LOCUS_15760	sequence19:25306..26076(-)	partial			WP_011728365.1	cutinase family protein	77.3	74.5	28.2
MGA_1588	LOCUS_15770	sequence19:26423..27967(+)	partial			WP_002899846.1	SpaA isopeptide-forming pilin-related protein	71.6	61.1	31.9
MGA_1591	LOCUS_15800	sequence19:30343..31194(-)	partial			WP_013363547.1	hypothetical protein	52.7	62.9	59.7
MGA_1597	LOCUS_15860	sequence19:36355..36603(-)	frameshift		36626	WP_007052360.1	dihydrofolate reductase	81.7	30.9	45.6
MGA_1598	LOCUS_15870	sequence19:36600..37037(-)	frameshift		36626	WP_007052360.1	dihydrofolate reductase	94.5	62.3	74.5
MGA_1618	LOCUS_16070	sequence19:59336..60613(-)	partial			WP_010877778.1	C45 family autoproteolytic acyltransferase/hydolase	53.9	38.9	27.3
MGA_1623	LOCUS_16120	sequence19:65795..67690(-)	partial			WP_013390201.1	PspC domain-containing protein	69.4	75.5	31.3
MGA_1625	LOCUS_16140	sequence19:69272..69898(+)	frameshift		69877	WP_003814649.1	response regulator transcription factor	97.1	80.7	78.7
MGA_1627	LOCUS_16160	sequence19:72126..72359(+)	frameshift		72344	WP_003814656.1	DUF4125 family protein	89.6	34.0	66.7
MGA_1628	LOCUS_16170	sequence19:72356..72736(+)	frameshift		72344	WP_003814656.1	DUF4125 family protein	100.0	62.1	61.9
MGA_1641	LOCUS_16300	sequence19:89829..90023(-)	frameshift		90103	WP_008782965.1	transcription termination factor NusA	100.0	18.3	75.4
MGA_1642	LOCUS_16310	sequence19:90020..90877(-)	frameshift		90103	WP_003815687.1	transcription termination factor NusA	90.5	75.4	85.3
MGA_1647	LOCUS_16360	sequence19:95899..96669(-)	frameshift		95946	WP_022173241.1	tRNA pseudouridine synthase A	95.3	83.3	62.8
MGA_1676	LOCUS_16650	sequence19:112843..113466(-)	frameshift		113527	WP_032736338.1	hypothetical protein	88.4	55.8	42.6
MGA_1693	LOCUS_16820	sequence20:339..935(-)	frameshift		149,278,392,56,269	WP_060618734.1	DUF4012 domain-containing protein	75.8	25.6	49.7
MGA_1694	LOCUS_16830	sequence20:1001..1564(-)	frameshift		1569	WP_011068360.1	polysaccharide biosynthesis tyrosine autokinase	96.8	37.9	51.9
MGA_1695	LOCUS_16840	sequence20:1537..2202(-)	frameshift		2217,2268,1566,2295	WP_011068360.1	polysaccharide biosynthesis tyrosine autokinase	95.0	44.6	44.1
MGA_1696	LOCUS_16850	sequence20:2722..3597(-)	frameshift		3670	WP_017143321.1	hypothetical protein	98.3	39.5	29.3
MGA_1697	LOCUS_16860	sequence20:3491..5008(-)	frameshift		3670	WP_013410302.1	hypothetical protein	82.0	53.0	30.7
MGA_1699	LOCUS_16880	sequence20:5383..6096(-)	frameshift		5436	WP_002289860.1	glycosyltransferase family 2 protein	94.5	71.7	58.8
MGA_1701	LOCUS_16900	sequence20:7197..7901(-)	partial			WP_002437151.1	Abi family protein	88.0	68.4	34.8
MGA_1710	LOCUS_16990	sequence20:18122..18799(-)	frameshift		18972	WP_013227019.1	extracellular solute-binding protein	99.6	51.8	39.0
MGA_1719	LOCUS_17080	sequence20:29136..29867(+)	partial			WP_013389466.1	FKBP-type peptidyl-prolyl cis-trans isomerase	99.2	74.5	57.7
MGA_1720	LOCUS_17090	sequence20:30287..30652(-)	frameshift		30657	WP_007051476.1	endonuclease NucS	100.0	47.3	89.3
MGA_1721	LOCUS_17100	sequence20:30550..30990(-)	frameshift		30657	WP_013363923.1	endonuclease NucS	76.0	47.2	69.4
MGA_1724	LOCUS_17130	sequence20:32900..33727(-)	frameshift		33744	WP_003814331.1	F0F1 ATP synthase subunit gamma	90.9	82.1	71.5
MGA_1740	LOCUS_17290	sequence20:45964..46767(-)	partial			WP_011860983.1	site-specific integrase	97.8	62.6	29.9
MGA_1744	LOCUS_17330	sequence20:50100..52238(-)	frameshift		52180	WP_013582331.1	glycoside hydrolase family 31 protein	97.2	76.9	56.6
MGA_1750	LOCUS_17390	sequence20:59790..62228(-)	frameshift		62434	WP_011102048.1	BspA family leucine-rich repeat surface protein	24.1	25.2	36.7
MGA_1752	LOCUS_17410	sequence20:62830..68931(-)	partial			WP_010989532.1	Cna B-type domain-containing protein	9.1	10.9	37.8
MGA_1753	LOCUS_17420	sequence20:68924..69976(-)	partial			WP_013389505.1	class C sortase	77.4	67.8	32.9
MGA_1756	LOCUS_17450	sequence20:73117..73578(-)	frameshift		73601	WP_013389505.1	class C sortase	60.1	23.6	66.7
MGA_1757	LOCUS_17460	sequence20:73572..74096(-)	frameshift		73601	WP_013389505.1	class C sortase	85.6	38.6	44.7
MGA_1758	LOCUS_17470	sequence20:74204..75865(-)	partial			WP_011068613.1	SpaH/EbpB family LPXTG-anchored major pilin	43.0	36.6	27.9
MGA_1760	LOCUS_17490	sequence20:76922..79153(-)	frameshift		79161	WP_011860772.1	SrtB-anchored collagen-binding adhesin	34.7	27.6	29.3
MGA_1761	LOCUS_17500	sequence20:79135..80394(-)	frameshift		79167	WP_011861958.1	SrtB-anchored collagen-binding adhesin	35.3	12.8	31.5
MGA_1762	LOCUS_17510	sequence20:80525..82018(-)	partial			WP_017143591.1	hypothetical protein	74.2	48.1	31.1
MGA_1777	LOCUS_17660	sequence20:100290..102251(+)	partial			WP_011068469.1	hypothetical protein	73.2	72.8	39.8
MGA_1785	LOCUS_17740	sequence20:111529..112746(-)	frameshift		112765,112894	WP_011120263.1	FAD-dependent oxidoreductase	56.5	36.4	35.8
MGA_1786	LOCUS_17750	sequence20:112862..113296(-)	frameshift		112765,112885	WP_005681492.1	FAD-dependent oxidoreductase	80.6	18.2	40.7
MGA_1791	LOCUS_17800	sequence20:115454..116446(-)	partial			WP_011727005.1	ABC transporter substrate-binding protein	70.0	57.6	30.0
MGA_1792	LOCUS_17810	sequence20:116543..117745(-)	frameshift		117819	WP_011027423.1	FAD-dependent oxidoreductase	78.2	65.7	39.2
MGA_1794	LOCUS_17830	sequence20:118939..119280(-)	frameshift		119240	WP_013390290.1	TrmH family RNA methyltransferase	75.2	29.6	80.5
MGA_1795	LOCUS_17840	sequence20:119214..119747(-)	frameshift		119240	WP_013390290.1	TrmH family RNA methyltransferase	95.5	59.9	65.3
MGA_1799	LOCUS_17880	sequence20:122179..123261(+)	frameshift		122173	WP_003814258.1	HAD-IC family P-type ATPase	87.2	41.0	31.8
MGA_1802	LOCUS_17910	sequence20:127317..127883(-)	frameshift		127918	WP_013389501.1	YggS family pyridoxal phosphate-dependent enzyme	92.6	62.4	65.5
MGA_1803	LOCUS_17920	sequence20:127880..128161(-)	frameshift		127918	WP_013389501.1	YggS family pyridoxal phosphate-dependent enzyme	86.0	29.2	80.0
MGA_1806	LOCUS_17950	sequence20:131267..132046(-)	partial			WP_003811773.1	DUF3152 domain-containing protein	71.0	67.3	49.5
MGA_1821	LOCUS_18100	sequence21:11801..12172(+)	frameshift		12091	WP_013227144.1	glycosyltransferase family 4 protein	57.7	18.6	50.7
MGA_1822	LOCUS_18110	sequence21:12064..12999(+)	frameshift		12085	WP_011027828.1	glycosyltransferase family 4 protein	96.1	74.2	45.2
MGA_1825	LOCUS_18140	sequence21:14438..14968(+)	frameshift		14788	WP_003817463.1	Holliday junction branch migration protein RuvA	69.3	59.5	64.8
MGA_1829	LOCUS_18180	sequence21:16829..17284(+)	frameshift		16811	WP_004113656.1	adenine phosphoribosyltransferase	100.0	78.2	65.6
MGA_1833	LOCUS_18220	sequence21:20778..21221(+)	frameshift		21152	WP_007052864.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	84.4	22.8	89.5
MGA_1834	LOCUS_18230	sequence21:21176..22414(+)	frameshift		21155	WP_013389934.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	100.0	75.3	79.9
MGA_1842	LOCUS_18310	sequence21:31095..31346(+)	frameshift		31322,31334	WP_011068114.1	DEAD/DEAH box helicase	91.6	8.1	59.2
MGA_1847	LOCUS_18360	sequence21:35529..35906(-)	frameshift		35338	WP_005167877.1	fluoride efflux transporter CrcB	71.2	71.7	51.6
MGA_1849	LOCUS_18380	sequence21:36341..37072(-)	partial			WP_003821294.1	MerR family transcriptional regulator	64.6	70.1	60.5
MGA_1853	LOCUS_18420	sequence21:38788..39123(-)	frameshift		39140	WP_094729941.1	DUF881 domain-containing protein	99.1	31.8	54.5
MGA_1854	LOCUS_18430	sequence21:39084..39761(-)	frameshift		39155	WP_007052289.1	DUF881 domain-containing protein	86.7	60.3	51.0
MGA_1864	LOCUS_18530	sequence21:48780..49481(+)	frameshift		49274	WP_161270038.1	adenosine deaminase	63.9	44.6	55.7
MGA_1865	LOCUS_18540	sequence21:49481..49804(+)	frameshift		49277	WP_011388524.1	adenosine deaminase	91.6	29.6	48.5
MGA_1886	LOCUS_18750	sequence21:68349..68774(+)	frameshift		68337,68733	WP_013389967.1	substrate-binding domain-containing protein	92.2	24.4	45.8
MGA_1887	LOCUS_18760	sequence21:68747..69295(+)	frameshift		68726	WP_011068096.1	substrate-binding domain-containing protein	99.5	35.2	50.8
MGA_1888	LOCUS_18770	sequence21:69322..69633(-)	partial			WP_011068095.1	M23 family metallopeptidase	92.2	41.5	49.0
MGA_1891	LOCUS_18800	sequence21:72216..72617(-)	frameshift		72553	WP_008783284.1	ribosomal protein S18-alanine N-acetyltransferase	77.4	55.4	61.2
MGA_1898	LOCUS_18870	sequence21:80623..80907(-)	frameshift		80655	WP_013389976.1	leucine--tRNA ligase	89.4	8.5	65.5
MGA_1903	LOCUS_18920	sequence21:84787..85767(-)	partial			WP_013390000.1	hypothetical protein	74.8	71.1	34.9
MGA_1909	LOCUS_18980	sequence21:90398..91033(-)	partial			WP_007053591.1	hypothetical protein	67.3	73.6	69.0
MGA_1914	LOCUS_19030	sequence21:96555..97067(-)	frameshift		97066	WP_003818094.1	NAD kinase	82.9	43.5	75.9
MGA_1915	LOCUS_19040	sequence21:97055..97525(-)	frameshift		97069	WP_003818094.1	NAD kinase	98.1	47.2	70.6
MGA_1917	LOCUS_19060	sequence21:98042..99202(+)	frameshift		97832	WP_013390013.1	potassium transporter TrkG	100.0	79.3	69.4
MGA_1921	LOCUS_19100	sequence21:101838..102821(-)	partial			WP_011068271.1	hypothetical protein	95.1	51.9	60.4
MGA_1934	LOCUS_19230	sequence22:1564..2361(+)	frameshift		2331	WP_004113786.1	sugar ABC transporter permease	87.9	76.1	67.8
MGA_1935	LOCUS_19240	sequence22:2361..2501(+)	frameshift		2331	WP_004113786.1	sugar ABC transporter permease	100.0	15.0	80.4
MGA_1948	LOCUS_19370	sequence22:15410..16927(-)	partial			WP_193312441.1	YPDG domain-containing protein	95.6	27.6	44.4
MGA_1972	LOCUS_19610	sequence22:53095..53316(+)	frameshift		53265	WP_011254470.1	beta-galactosidase	78.1	8.5	59.6
MGA_1975	LOCUS_19640	sequence22:56232..57029(-)	partial			WP_013227638.1	TetR/AcrR family transcriptional regulator	63.0	82.6	29.7
MGA_1980	LOCUS_19690	sequence22:61345..61797(-)	partial			WP_004113848.1	hypothetical protein	48.7	70.9	64.4
MGA_1981	LOCUS_19700	sequence22:61899..62609(-)	partial			WP_013390354.1	hypothetical protein	71.2	60.5	41.7
MGA_1992	LOCUS_19810	sequence22:78584..79528(-)	frameshift		78622	WP_013390347.1	ATP-binding cassette domain-containing protein	92.7	79.5	27.8
MGA_1996	LOCUS_19850	sequence22:85536..86126(+)	frameshift		86036	WP_011068688.1	glycosyltransferase	86.2	26.7	45.6
MGA_1997	LOCUS_19860	sequence22:86117..87406(+)	frameshift		86036	WP_011068688.1	glycosyltransferase	99.8	69.1	52.8
MGA_2000	LOCUS_19890	sequence22:89814..90620(+)	partial			WP_009994355.1	glycoside hydrolase family 25 protein	81.7	34.6	39.5
MGA_2002	LOCUS_19910	sequence22:92829..93125(-)	frameshift		93283	WP_011068304.1	LTA synthase family protein	98.0	14.0	46.4
MGA_2003	LOCUS_19920	sequence22:93122..94009(-)	frameshift		94032,93282	WP_225431655.1	alkaline phosphatase family protein	82.0	34.9	57.6
MGA_2004	LOCUS_19930	sequence22:94295..95329(-)	frameshift		94033,94342,94327	WP_225431655.1	alkaline phosphatase family protein	33.1	16.5	46.5
MGA_2007	LOCUS_19960	sequence22:96755..97069(-)	frameshift		97080,96825	WP_015776102.1	glycosyltransferase	76.0	26.8	55.7
MGA_2008	LOCUS_19970	sequence22:96952..97629(-)	frameshift,internal_stop_codon	97081..97083(-)	96825,97098	WP_001278665.1	UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase	77.8	54.2	28.4