{
    "type": "genome",
    "identifier": "GCF_009735625.1",
    "organism": "Moorella glycerini",
    "title": "Moorella glycerini",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Georg-August-University Goettingen",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_009735625.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN13152000",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "55779",
        "species_taxid": "55779",
        "organism_name": "Moorella glycerini",
        "infraspecific_name": "strain=DSM 11254",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Chromosome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/11/28",
        "asm_name": "ASM973562v1",
        "asm_submitter": "Georg-August-University Goettingen",
        "gbrs_paired_asm": "GCA_009735625.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/735/625/GCF_009735625.1_ASM973562v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3559563",
        "genome_size_ungapped": "3559463",
        "gc_percent": "54.500000",
        "replicon_count": "2",
        "scaffold_count": "2",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_009735625.1-RS_2024_04_08",
        "annotation_date": "2024-04-08",
        "total_gene_count": "3562",
        "protein_coding_gene_count": "3467",
        "non_coding_gene_count": "58",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-11-28",
    "dateModified": "2019-11-28",
    "datePublished": "2019-11-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Moorella glycerini"
        ],
        "sample_taxid": [
            "55779"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Yellowstone National Park"
        ],
        "sample_host_location_id": [],
        "data_size": "0.996 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3559463",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "3509388",
        "N50 (bp)": "3509388",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "54.7",
        "Number of CDSs": "3543",
        "Average Protein Length": "295.1",
        "Coding Ratio (%)": "88.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Moorella glycerini",
                "strain": "strain=DSM 11254",
                "accession": "GCA_009735625.1",
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                "species_taxid": 55779,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
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                "total_fragments": 1185,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Moorella stamsii",
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                "accession": "GCA_002995805.1",
                "taxid": 1266720,
                "species_taxid": 1266720,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.2924,
                "matched_fragments": 746,
                "total_fragments": 1185,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Moorella mulderi",
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                "accession": "GCA_001594015.1",
                "taxid": 202604,
                "species_taxid": 202604,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 720,
                "total_fragments": 1185,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Moorella humiferrea",
                "strain": "strain=DSM 23265",
                "accession": "GCA_002995755.1",
                "taxid": 676965,
                "species_taxid": 676965,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.1791,
                "matched_fragments": 525,
                "total_fragments": 1185,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Moorella thermoacetica",
                "strain": "strain=DSM 2955",
                "accession": "GCA_001267435.1",
                "taxid": 1525,
                "species_taxid": 1525,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.2544,
                "matched_fragments": 504,
                "total_fragments": 1185,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Moorella thermoacetica",
                "strain": "strain=ATCC 35608",
                "accession": "GCA_008121885.1",
                "taxid": 1525,
                "species_taxid": 1525,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0333,
                "matched_fragments": 495,
                "total_fragments": 1185,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_009735625.1",
                "gtdb_species": "s__Moorella glycerini",
                "ani": 100.0,
                "matched_fragments": 1184,
                "total_fragments": 1185,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Moorellia;o__Moorellales;f__Moorellaceae;g__Moorella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_002995805.1",
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                "matched_fragments": 747,
                "total_fragments": 1185,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Moorellia;o__Moorellales;f__Moorellaceae;g__Moorella",
                "ani_circumscription_radius": 95.265,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCF_001594015.1",
                "gtdb_species": "s__Moorella mulderi",
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                "total_fragments": 1185,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Moorellia;o__Moorellales;f__Moorellaceae;g__Moorella",
                "ani_circumscription_radius": 95.265,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_006538365.1",
                "gtdb_species": "s__Moorella sp006538365",
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                "matched_fragments": 684,
                "total_fragments": 1185,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Moorellia;o__Moorellales;f__Moorellaceae;g__Moorella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.18",
                "min_intra_species_ani": "99.18",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCF_002995755.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Moorellia;o__Moorellales;f__Moorellaceae;g__Moorella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.49",
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                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_003116935.1",
                "gtdb_species": "s__Moorella sp003116935",
                "ani": 80.6711,
                "matched_fragments": 555,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Moorellia;o__Moorellales;f__Moorellaceae;g__Moorella",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002383405.1",
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                "matched_fragments": 348,
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.303,
        "cell_length": 0.384,
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        "growth_tmp": 60.0,
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        "genome_size": 3573976.0,
        "gc_content": 55.717,
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        "rRNA16S_genes": 1.333,
        "tRNA_genes": 51.2,
        "gram_stain": 1.0,
        "sporulation": 1.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.0,
        "thermophilic_range_tmp": 1.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_genome_taxon": [
        "Moorella",
        "glycerini"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}