{
    "type": "genome",
    "identifier": "GCF_009746625.1",
    "organism": "Caproicibacter fermentans",
    "title": "Caproicibacter fermentans",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Georg-August-University Goettingen",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_009746625.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN11585615",
        "wgs_master": "VWXL00000000.1",
        "refseq_category": "na",
        "taxid": "2576756",
        "species_taxid": "2576756",
        "organism_name": "Caproicibacter fermentans",
        "infraspecific_name": "strain=EA1",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/12/13",
        "asm_name": "ASM974662v1",
        "asm_submitter": "Georg-August-University Goettingen",
        "gbrs_paired_asm": "GCA_009746625.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/746/625/GCF_009746625.1_ASM974662v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3895666",
        "genome_size_ungapped": "3895666",
        "gc_percent": "51.000000",
        "replicon_count": "0",
        "scaffold_count": "113",
        "contig_count": "113",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)",
        "annotation_date": "2024-02-05",
        "total_gene_count": "3959",
        "protein_coding_gene_count": "3811",
        "non_coding_gene_count": "64",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-12-13",
    "dateModified": "2019-12-13",
    "datePublished": "2019-12-13",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Caproicibacter fermentans"
        ],
        "sample_taxid": [
            "2576756"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not collected"
        ],
        "sample_host_location_id": [],
        "data_size": "1.108 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3895666",
        "Number of Sequences": "113",
        "Longest Sequences (bp)": "379673",
        "N50 (bp)": "112991",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.2",
        "Number of CDSs": "3894",
        "Average Protein Length": "290.5",
        "Coding Ratio (%)": "87.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Clostridium jeddahense",
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                "accession": "GCA_000577335.1",
                "taxid": 1414721,
                "species_taxid": 1414721,
                "relation_to_type": "type",
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                "matched_fragments": 95,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
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                "status": "below_threshold"
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Hydrogeniiclostridium mannosilyticum",
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                "accession": "GCA_003268275.1",
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                "relation_to_type": "type",
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                "matched_fragments": 62,
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                "ani_threshold": 95,
                "status": "below_threshold"
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        ],
        "cc_result": {
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            "contamination": 0.0,
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                "accession": "GCF_009746625.1",
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            },
            {
                "accession": "GCA_002399225.1",
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            {
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    "quality": 4,
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}