{
    "type": "genome",
    "identifier": "GCF_009749465.1",
    "organism": "Agromyces terreus",
    "title": "Agromyces terreus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_009749465.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN12869714",
        "wgs_master": "WBIS00000000.1",
        "refseq_category": "reference genome",
        "taxid": "424795",
        "species_taxid": "424795",
        "organism_name": "Agromyces terreus",
        "infraspecific_name": "strain=JCM 14581",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/12/14",
        "asm_name": "ASM974946v1",
        "asm_submitter": "National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr",
        "gbrs_paired_asm": "GCA_009749465.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/749/465/GCF_009749465.1_ASM974946v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3708632",
        "genome_size_ungapped": "3708632",
        "gc_percent": "71.000000",
        "replicon_count": "0",
        "scaffold_count": "27",
        "contig_count": "27",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_009749465.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "3315",
        "protein_coding_gene_count": "3237",
        "non_coding_gene_count": "56",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-12-14",
    "dateModified": "2019-12-14",
    "datePublished": "2019-12-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Agromyces terreus"
        ],
        "sample_taxid": [
            "424795"
        ],
        "sample_host_organism": [
            "not collected"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not collected"
        ],
        "sample_host_location_id": [],
        "data_size": "0.976 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3708632",
        "Number of Sequences": "27",
        "Longest Sequences (bp)": "1147103",
        "N50 (bp)": "789644",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "71.1",
        "Number of CDSs": "3260",
        "Average Protein Length": "346.0",
        "Coding Ratio (%)": "91.3",
        "Number of rRNAs": "5",
        "Number of tRNAs": "59",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Agromyces terreus",
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                "species_taxid": 424795,
                "relation_to_type": "type",
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                "total_fragments": 1226,
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            },
            {
                "organism_name": "Agromyces salentinus",
                "strain": "strain=JCM 14323",
                "accession": "GCA_009749395.1",
                "taxid": 269421,
                "species_taxid": 269421,
                "relation_to_type": "type",
                "validated": true,
                "ani": 86.5711,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces allii",
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                "accession": "GCA_009749385.1",
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                "ani": 86.4433,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces aureus",
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                "taxid": 453304,
                "species_taxid": 453304,
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                "ani": 86.3368,
                "matched_fragments": 983,
                "total_fragments": 1226,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces humi",
                "strain": "strain=ANK073",
                "accession": "GCA_009720255.2",
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                "species_taxid": 1766800,
                "relation_to_type": "type",
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                "ani": 83.534,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces lapidis",
                "strain": "strain=JCM 14321",
                "accession": "GCA_009749405.1",
                "taxid": 279574,
                "species_taxid": 279574,
                "relation_to_type": "type",
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                "ani": 83.4482,
                "matched_fragments": 808,
                "total_fragments": 1226,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces hippuratus",
                "strain": "strain=DSM 8598",
                "accession": "GCA_013410355.1",
                "taxid": 286438,
                "species_taxid": 286438,
                "relation_to_type": "type",
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                "ani": 83.4086,
                "matched_fragments": 818,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces mariniharenae",
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                "taxid": 2604423,
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            {
                "organism_name": "Agromyces badenianii",
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                "species_taxid": 2080742,
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                "ani": 83.2083,
                "matched_fragments": 705,
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                "status": "below_threshold"
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            {
                "organism_name": "Agromyces fucosus",
                "strain": "strain=CCUG 35506",
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                "taxid": 41985,
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                "ani": 83.2039,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces cavernae",
                "strain": "strain=SYSU K20354",
                "accession": "GCA_021044935.1",
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                "species_taxid": 2898659,
                "relation_to_type": "type",
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                "ani": 82.7829,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces agglutinans",
                "strain": "strain=CFH 90414",
                "accession": "GCA_009647605.1",
                "taxid": 2662258,
                "species_taxid": 2662258,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.6341,
                "matched_fragments": 821,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces humatus",
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                "accession": "GCA_021228295.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces albus",
                "strain": "strain=DSM 15934",
                "accession": "GCA_004134825.1",
                "taxid": 205332,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 82.4361,
                "matched_fragments": 725,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces archimandritae",
                "strain": "strain=G127AT",
                "accession": "GCA_018024495.1",
                "taxid": 2781962,
                "species_taxid": 2781962,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0393,
                "matched_fragments": 617,
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                "status": "below_threshold"
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        "cc_result": {
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                "accession": "GCF_009749465.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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    "_bac2feature": {
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    "_genome_taxon": [
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}