{ "type": "genome", "identifier": "GCF_009763245.1", "organism": "Pseudomonas xionganensis", "title": "Pseudomonas xionganensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Microbiology, Chinese Academy of Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009763245.1", "bioproject": "PRJNA224116", "biosample": "SAMN13268013", "wgs_master": "WKJZ00000000.1", "refseq_category": "reference genome", "taxid": "2654845", "species_taxid": "2654845", "organism_name": "Pseudomonas xionganensis", "infraspecific_name": "strain=R-22-3 w-18", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/12/18", "asm_name": "ASM976324v1", "asm_submitter": "Institute of Microbiology, Chinese Academy of Sciences", "gbrs_paired_asm": "GCA_009763245.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/763/245/GCF_009763245.1_ASM976324v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3958707", "genome_size_ungapped": "3957607", "gc_percent": "63.000000", "replicon_count": "0", "scaffold_count": "9", "contig_count": "9", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009763245.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "3739", "protein_coding_gene_count": "3643", "non_coding_gene_count": "59", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-12-18", "dateModified": "2019-12-18", "datePublished": "2019-12-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas xionganensis" ], "sample_taxid": [ "2654845" ], "sample_host_organism": [], 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83.7622, "matched_fragments": 898, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas guguanensis", "strain": "strain=JCM 18416", "accession": "GCA_900104265.1", "taxid": 1198456, "species_taxid": 1198456, "relation_to_type": "type", "validated": true, "ani": 83.5088, "matched_fragments": 927, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas tumuqii", "strain": "strain=LAMW06", "accession": "GCA_013184545.1", "taxid": 2715755, "species_taxid": 2715755, "relation_to_type": "type", "validated": true, "ani": 83.4984, "matched_fragments": 937, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas peli", "strain": "strain=DSM 17833", "accession": "GCA_012986145.1", "taxid": 592361, "species_taxid": 592361, "relation_to_type": "type", "validated": true, "ani": 83.4658, "matched_fragments": 948, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas peli", "strain": "strain=DSM 17833", "accession": "GCA_900099645.1", "taxid": 592361, "species_taxid": 592361, "relation_to_type": "type", "validated": true, "ani": 83.3739, "matched_fragments": 953, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas sihuiensis", "strain": "strain=KCTC 32246", "accession": "GCA_900106015.1", "taxid": 1274359, "species_taxid": 1274359, "relation_to_type": "type", "validated": true, "ani": 83.0827, "matched_fragments": 915, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas alcaligenes", "strain": "strain=NBRC 14159", "accession": "GCA_000467105.1", "taxid": 43263, "species_taxid": 43263, "relation_to_type": "type", "validated": true, "ani": 83.0614, "matched_fragments": 882, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas alcaligenes", "strain": "strain=NCTC10367", "accession": "GCA_900455475.1", "taxid": 43263, "species_taxid": 43263, "relation_to_type": "type", "validated": true, "ani": 83.0134, "matched_fragments": 880, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas yangonensis", "strain": "strain=MY50", "accession": "GCA_009932725.1", "taxid": 2579922, "species_taxid": 2579922, "relation_to_type": "type", "validated": true, "ani": 82.8451, "matched_fragments": 892, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cuatrocienegasensis", "strain": "strain=CIP 109853", "accession": "GCA_900110925.1", "taxid": 543360, "species_taxid": 543360, "relation_to_type": "type", "validated": true, "ani": 82.788, "matched_fragments": 857, "total_fragments": 1316, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas argentinensis", 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