{ "tc_result": [ { "organism_name": "Massilia putida", "strain": "strain=6NM-7", "accession": "GCA_001941825.1", "taxid": 1141883, "species_taxid": 1141883, "relation_to_type": "type", "validated": true, "ani": 89.9796, "matched_fragments": 1770, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia rhizosphaerae", "strain": "strain=NEAU-GH312", "accession": "GCA_016093545.1", "taxid": 2784389, "species_taxid": 2784389, "relation_to_type": "type", "validated": true, "ani": 89.4659, "matched_fragments": 1787, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia pinisoli", "strain": "strain=JCM 31316", "accession": "GCA_024753285.1", "taxid": 1772194, "species_taxid": 1772194, "relation_to_type": "type", "validated": true, "ani": 89.0661, "matched_fragments": 1721, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia norwichensis", "strain": "strain=LMG 28164", "accession": "GCA_024753245.1", "taxid": 1442366, "species_taxid": 1442366, "relation_to_type": "type", "validated": true, "ani": 83.955, "matched_fragments": 1366, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia forsythiae", "strain": "strain=GN2-R2", "accession": "GCA_012849555.1", "taxid": 2728020, "species_taxid": 2728020, "relation_to_type": "type", "validated": true, "ani": 83.5265, "matched_fragments": 1427, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia niastensis", "strain": "strain=DSM 21313", "accession": "GCA_000382345.1", "taxid": 544911, "species_taxid": 544911, "relation_to_type": "type", "validated": true, "ani": 82.1433, "matched_fragments": 1205, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia alkalitolerans", "strain": "strain=DSM 17462", "accession": "GCA_000427785.1", "taxid": 286638, "species_taxid": 286638, "relation_to_type": "type", "validated": true, "ani": 81.8595, "matched_fragments": 1184, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia solisilvae", "strain": "strain=JCM 31607", "accession": "GCA_024753215.1", "taxid": 1811225, "species_taxid": 1811225, "relation_to_type": "type", "validated": true, "ani": 81.7897, "matched_fragments": 1101, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia agri", "strain": "strain=JCM 31661", "accession": "GCA_024753255.1", "taxid": 1886785, "species_taxid": 1886785, "relation_to_type": "type", "validated": true, "ani": 81.6567, "matched_fragments": 1149, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter alkalitolerans", "strain": "strain=KACC 19305", "accession": "GCA_016722765.1", "taxid": 2039631, "species_taxid": 2039631, "relation_to_type": "type", "validated": true, "ani": 76.9263, "matched_fragments": 479, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera butanivorans", "strain": "strain=NBRC 103042", "accession": "GCA_001591165.1", "taxid": 86174, "species_taxid": 86174, "relation_to_type": "type", "validated": true, "ani": 76.7535, "matched_fragments": 372, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas daejeonensis", "strain": "strain=JCM 16244", "accession": "GCA_001431505.1", "taxid": 659018, "species_taxid": 659018, "relation_to_type": "type", "validated": true, "ani": 76.1048, "matched_fragments": 273, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas maltophilia", "strain": "strain=NBRC 14161", "accession": "GCA_001591205.1", "taxid": 40324, "species_taxid": 40324, "relation_to_type": "type", "validated": true, "ani": 76.0752, "matched_fragments": 239, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas composti", "strain": "strain=GSS15", "accession": "GCA_004122095.1", "taxid": 2137479, "species_taxid": 2137479, "relation_to_type": "type", "validated": true, "ani": 75.612, "matched_fragments": 255, "total_fragments": 2432, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001426525.1", "gtdb_species": "s__Massilia sp001426525", "ani": 99.3818, "matched_fragments": 2238, "total_fragments": 2432, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Massilia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.62", "min_intra_species_ani": "99.38", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCF_000759615.1", "gtdb_species": "s__Massilia sp000759615", "ani": 93.2493, "matched_fragments": 2032, "total_fragments": 2432, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Massilia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900101265.1", "gtdb_species": "s__Massilia sp900101265", "ani": 92.8931, "matched_fragments": 2042, "total_fragments": 2432, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Massilia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002968015.1", "gtdb_species": "s__Massilia phosphatilytica", "ani": 92.5541, "matched_fragments": 1999, "total_fragments": 2432, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Massilia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001941825.1", "gtdb_species": "s__Massilia putida", "ani": 89.9764, "matched_fragments": 1770, "total_fragments": 2432, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Massilia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": 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"matched_fragments": 544, "total_fragments": 2432, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CAIMXF01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016722765.1", "gtdb_species": "s__Ramlibacter alkalitolerans", "ani": 76.9322, "matched_fragments": 477, "total_fragments": 2432, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ramlibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001591165.1", "gtdb_species": "s__Thauera butanivorans", "ani": 76.7934, "matched_fragments": 366, "total_fragments": 2432, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }