{ "type": "genome", "identifier": "GCF_009827405.1", "organism": "Alteraurantiacibacter aestuarii", "title": "Alteraurantiacibacter aestuarii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Zhejiang Sci-Tech University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009827405.1", "bioproject": "PRJNA224116", "biosample": "SAMN13631573", "wgs_master": "WTYY00000000.1", "refseq_category": "na", "taxid": "650004", "species_taxid": "650004", "organism_name": "Alteraurantiacibacter aestuarii", "infraspecific_name": "strain=JCM 16339", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/01/02", "asm_name": "ASM982740v1", "asm_submitter": "Zhejiang Sci-Tech University", "gbrs_paired_asm": "GCA_009827405.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/827/405/GCF_009827405.1_ASM982740v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2241463", "genome_size_ungapped": "2241463", "gc_percent": "62.500000", "replicon_count": "0", "scaffold_count": "5", "contig_count": "5", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009827405.1-RS_2024_03_16", "annotation_date": "2024-03-16", "total_gene_count": "2147", "protein_coding_gene_count": "2106", "non_coding_gene_count": "32", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-01-02", "dateModified": "2020-01-02", "datePublished": "2020-01-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Alteraurantiacibacter aestuarii" ], "sample_taxid": [ "650004" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Aurantiacibacter suaedae", "strain": "strain=GH3-15", "accession": "GCA_005434915.1", "taxid": 2545755, "species_taxid": 2545755, "relation_to_type": "type", "validated": true, "ani": 78.771, "matched_fragments": 325, "total_fragments": 745, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Croceibacterium ferulae", "strain": "strain=SX2RGS8", "accession": "GCA_003660445.1", "taxid": 1854641, "species_taxid": 1854641, "relation_to_type": "type", "validated": true, "ani": 78.7141, "matched_fragments": 245, "total_fragments": 745, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aurantiacibacter luteus", "strain": "strain=KA37", "accession": "GCA_001010945.1", "taxid": 1581420, "species_taxid": 1581420, "relation_to_type": "type", "validated": true, "ani": 78.6422, "matched_fragments": 288, "total_fragments": 745, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Croceibacterium 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745, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Alteraurantiacibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009827655.1", "gtdb_species": "s__Alteraurantiacibacter buctensis", "ani": 80.0397, "matched_fragments": 437, "total_fragments": 745, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Alteraurantiacibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003569745.1", "gtdb_species": "s__Croceibacterium sp003569745", "ani": 79.5362, "matched_fragments": 341, "total_fragments": 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