{ "type": "genome", "identifier": "GCF_009833495.1", "organism": "Oceanomicrobium pacificus", "title": "Oceanomicrobium pacificus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Oceanology Chinese Academy of Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_009833495.1", "bioproject": "PRJNA224116", "biosample": "SAMN13702597", "wgs_master": "WUWG00000000.1", "refseq_category": "reference genome", "taxid": "2692916", "species_taxid": "2692916", "organism_name": "Oceanomicrobium pacificus", "infraspecific_name": "strain=KN286", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/01/07", "asm_name": "ASM983349v1", "asm_submitter": "Institute of Oceanology Chinese Academy of Sciences", "gbrs_paired_asm": "GCA_009833495.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/833/495/GCF_009833495.1_ASM983349v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3255458", "genome_size_ungapped": "3255458", "gc_percent": "65.000000", "replicon_count": "0", "scaffold_count": "10", "contig_count": "10", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_009833495.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "3162", "protein_coding_gene_count": "3100", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-01-07", "dateModified": "2020-01-07", "datePublished": "2020-01-07", "_annotation": { "sample_count": 1, "sample_organism": [ "Oceanomicrobium pacificus" ], "sample_taxid": [ "2692916" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Pacific Ocean: Caroline Seamount" ], "sample_host_location_id": [], "data_size": "0.895 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3255458", "Number of Sequences": "10", "Longest Sequences (bp)": "1228696", "N50 (bp)": "1009265", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "65.0", "Number of CDSs": "3112", "Average Protein Length": "321.6", "Coding Ratio (%)": "92.2", "Number of rRNAs": "3", "Number of tRNAs": "50", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Oceanomicrobium pacificus", "strain": "strain=KN286", "accession": "GCA_009833495.1", "taxid": 2692916, 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