{
    "type": "genome",
    "identifier": "GCF_009857605.1",
    "organism": "Duganella levis",
    "title": "Duganella levis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Guangdong Institute of Microbiology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_009857605.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN13678850",
        "wgs_master": "WWCT00000000.1",
        "refseq_category": "reference genome",
        "taxid": "2692169",
        "species_taxid": "2692169",
        "organism_name": "Duganella levis",
        "infraspecific_name": "strain=CY42W",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/01/12",
        "asm_name": "ASM985760v1",
        "asm_submitter": "Guangdong Institute of Microbiology",
        "gbrs_paired_asm": "GCA_009857605.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/857/605/GCF_009857605.1_ASM985760v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6742924",
        "genome_size_ungapped": "6742924",
        "gc_percent": "62.500000",
        "replicon_count": "0",
        "scaffold_count": "104",
        "contig_count": "104",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_009857605.1-RS_2024_08_26",
        "annotation_date": "2024-08-26",
        "total_gene_count": "6231",
        "protein_coding_gene_count": "6059",
        "non_coding_gene_count": "115",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-01-12",
    "dateModified": "2020-01-12",
    "datePublished": "2020-01-12",
    "_annotation": {
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        "sample_organism": [
            "Duganella levis"
        ],
        "sample_taxid": [
            "2692169"
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "1.869 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6742924",
        "Number of Sequences": "104",
        "Longest Sequences (bp)": "667719",
        "N50 (bp)": "186573",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.5",
        "Number of CDSs": "5969",
        "Average Protein Length": "343.0",
        "Coding Ratio (%)": "91.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "90",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Duganella lactea",
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                "accession": "GCA_009857505.1",
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                "species_taxid": 2692173,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.1649,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Duganella flavida",
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                "species_taxid": 2692175,
                "relation_to_type": "type",
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                "ani": 86.1133,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
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            },
            {
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                "species_taxid": 762836,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "ani_threshold": 95,
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            {
                "organism_name": "Rugamonas fusca",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duganella",
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                "mean_intra_species_ani": "N/A",
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}