{
    "type": "genome",
    "identifier": "GCF_009906795.1",
    "organism": "Kineococcus siccus",
    "title": "Kineococcus siccus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute for Integrative Systems Biology (University of Valencia-CSIC)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_009906795.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN13758280",
        "wgs_master": "JAAALN000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2696567",
        "species_taxid": "2696567",
        "organism_name": "Kineococcus siccus",
        "infraspecific_name": "strain=R8",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/01/19",
        "asm_name": "ASM990679v1",
        "asm_submitter": "Institute for Integrative Systems Biology (University of Valencia-CSIC)",
        "gbrs_paired_asm": "GCA_009906795.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/906/795/GCF_009906795.1_ASM990679v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4580277",
        "genome_size_ungapped": "4580047",
        "gc_percent": "75.000000",
        "replicon_count": "0",
        "scaffold_count": "495",
        "contig_count": "495",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_009906795.1-RS_2024_03_29",
        "annotation_date": "2024-03-29",
        "total_gene_count": "4440",
        "protein_coding_gene_count": "4324",
        "non_coding_gene_count": "53",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-01-19",
    "dateModified": "2020-01-19",
    "datePublished": "2020-01-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Kineococcus siccus"
        ],
        "sample_taxid": [
            "2696567"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Spain: Almeria"
        ],
        "sample_host_location_id": [],
        "data_size": "1.205 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4580277",
        "Number of Sequences": "495",
        "Longest Sequences (bp)": "112465",
        "N50 (bp)": "16984",
        "Gap Ratio (%)": "0.005022",
        "GCcontent (%)": "75.1",
        "Number of CDSs": "3944",
        "Average Protein Length": "317.1",
        "Coding Ratio (%)": "81.9",
        "Number of rRNAs": "3",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Kineococcus siccus",
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            },
            {
                "organism_name": "Kineococcus rubinsiae",
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                "species_taxid": 2609562,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kineococcus indalonis",
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                "species_taxid": 2696566,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Kineococcus vitellinus",
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                "species_taxid": 2696565,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kineococcus radiotolerans",
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                "relation_to_type": "type",
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                "matched_fragments": 803,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kineococcus aurantiacus",
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                "taxid": 37633,
                "species_taxid": 37633,
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            {
                "organism_name": "Kineococcus rhizosphaerae",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Georgenia wutianyii",
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            },
            {
                "organism_name": "Cellulomonas shaoxiangyii",
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                "species_taxid": 2566013,
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                "ani": 77.072,
                "matched_fragments": 466,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Occultella gossypii",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Occultella kanbiaonis",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Occultella glacieicola",
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                "accession": "GCA_004353825.1",
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                "species_taxid": 2518684,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6005,
                "matched_fragments": 314,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Occultella aeris",
                "strain": "strain=CIP 111667",
                "accession": "GCA_902703175.1",
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                "relation_to_type": "type",
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                "status": "below_threshold"
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        ],
        "cc_result": {
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            "contamination": 0.0,
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                "accession": "GCF_009906795.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
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        ]
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    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}