{
    "type": "genome",
    "identifier": "GCF_010499425.1",
    "organism": "Desulfolutivibrio sulfodismutans",
    "title": "Desulfolutivibrio sulfodismutans",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Harvard University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_010499425.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN14047973",
        "wgs_master": "JAAGRQ000000000.1",
        "refseq_category": "na",
        "taxid": "63561",
        "species_taxid": "63561",
        "organism_name": "Desulfolutivibrio sulfodismutans",
        "infraspecific_name": "strain=DSM 3696",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/02/12",
        "asm_name": "ASM1049942v1",
        "asm_submitter": "Harvard University",
        "gbrs_paired_asm": "GCA_010499425.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/010/499/425/GCF_010499425.1_ASM1049942v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4375913",
        "genome_size_ungapped": "4375913",
        "gc_percent": "63.500000",
        "replicon_count": "0",
        "scaffold_count": "290",
        "contig_count": "290",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_010499425.1-RS_2024_07_29",
        "annotation_date": "2024-07-29",
        "total_gene_count": "4049",
        "protein_coding_gene_count": "3942",
        "non_coding_gene_count": "61",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-02-12",
    "dateModified": "2020-02-12",
    "datePublished": "2020-02-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Desulfolutivibrio sulfodismutans"
        ],
        "sample_taxid": [
            "63561"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Lake Constance"
        ],
        "sample_host_location_id": [],
        "data_size": "1.226 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4375913",
        "Number of Sequences": "290",
        "Longest Sequences (bp)": "102263",
        "N50 (bp)": "37406",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "63.5",
        "Number of CDSs": "3852",
        "Average Protein Length": "314.2",
        "Coding Ratio (%)": "83.0",
        "Number of rRNAs": "3",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Desulfovibrio sulfodismutans",
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                "accession": "GCA_010499425.1",
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                "species_taxid": 63561,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1339,
                "total_fragments": 1349,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Desulfovibrio sulfodismutans",
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                "validated": true,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
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                "accession": "GCA_004135975.1",
                "taxid": 296842,
                "species_taxid": 296842,
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                "status": "below_threshold"
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            {
                "organism_name": "Solidesulfovibrio magneticus",
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                "species_taxid": 184917,
                "relation_to_type": "type",
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                "ani": 78.6731,
                "matched_fragments": 505,
                "total_fragments": 1349,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solidesulfovibrio alcoholivorans",
                "strain": "strain=DSM 5433",
                "accession": "GCA_000702665.1",
                "taxid": 81406,
                "species_taxid": 81406,
                "relation_to_type": "type",
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                "ani": 78.6629,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solidesulfovibrio fructosivorans",
                "strain": "strain=JJ",
                "accession": "GCA_000179555.1",
                "taxid": 878,
                "species_taxid": 878,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6233,
                "matched_fragments": 487,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfovibrio carbinoliphilus subsp. oakridgensis",
                "strain": "strain=FW-101-2B",
                "accession": "GCA_000177215.2",
                "taxid": 694327,
                "species_taxid": 345370,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5558,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudodesulfovibrio mercurii",
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                "accession": "GCA_000189295.2",
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                "species_taxid": 641491,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Pseudodesulfovibrio aespoeensis",
                "strain": "strain=Aspo-2",
                "accession": "GCA_000176915.2",
                "taxid": 182210,
                "species_taxid": 182210,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.195,
                "matched_fragments": 249,
                "total_fragments": 1349,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "accession": "GCA_000307955.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Solidesulfovibrio",
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        ]
    },
    "_bac2feature": {
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    },
    "_genome_taxon": [
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        "sulfodismutans"
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    "quality": 4,
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}