{ "type": "genome", "identifier": "GCF_010500895.1", "organism": "Alteromonas genovensis", "title": "Alteromonas genovensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Zhejiang Wanli University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_010500895.1", "bioproject": "PRJNA224116", "biosample": "SAMN13753693", "wgs_master": "JAAAWO000000000.1", "refseq_category": "reference genome", "taxid": "471225", "species_taxid": "471225", "organism_name": "Alteromonas genovensis", "infraspecific_name": "strain=LMG 24078", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/12", "asm_name": "ASM1050089v1", "asm_submitter": "Zhejiang Wanli University", "gbrs_paired_asm": "GCA_010500895.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/010/500/895/GCF_010500895.1_ASM1050089v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4071069", "genome_size_ungapped": "4071069", "gc_percent": "44.500000", "replicon_count": "0", "scaffold_count": "37", "contig_count": "37", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_010500895.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "3509", "protein_coding_gene_count": "3408", "non_coding_gene_count": "83", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-12", "dateModified": "2020-02-12", "datePublished": "2020-02-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Alteromonas genovensis" ], "sample_taxid": [ "471225" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not applicable" ], "sample_host_location_id": [], "data_size": "1.165 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4071069", "Number of Sequences": "37", "Longest Sequences (bp)": "671244", "N50 (bp)": "340293", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "44.3", "Number of CDSs": "3443", "Average Protein Length": "340.6", "Coding Ratio (%)": "86.4", "Number of rRNAs": "2", "Number of tRNAs": "62", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Alteromonas genovensis", "strain": "strain=LMG 24078", "accession": "GCA_010500895.1", "taxid": 471225, "species_taxid": 471225, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1339, "total_fragments": 1339, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Alteromonas hispanica", "strain": "strain=LMG 22958", "accession": "GCA_010500915.1", "taxid": 315421, "species_taxid": 315421, "relation_to_type": "type", "validated": true, "ani": 82.341, "matched_fragments": 763, "total_fragments": 1339, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas mediterranea", "strain": "strain=DE", "accession": "GCA_000020585.3", "taxid": 314275, "species_taxid": 314275, "relation_to_type": "type", "validated": true, "ani": 79.7984, "matched_fragments": 432, "total_fragments": 1339, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas portus", "strain": "strain=HB161718", "accession": "GCA_005117025.1", "taxid": 2565549, "species_taxid": 2565549, "relation_to_type": "type", "validated": true, "ani": 79.5838, "matched_fragments": 434, "total_fragments": 1339, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas 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