{ "type": "genome", "identifier": "GCF_010500915.1", "organism": "Alteromonas hispanica", "title": "Alteromonas hispanica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Zhejiang Wanli University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_010500915.1", "bioproject": "PRJNA224116", "biosample": "SAMN13781132", "wgs_master": "JAAAWP000000000.1", "refseq_category": "reference genome", "taxid": "315421", "species_taxid": "315421", "organism_name": "Alteromonas hispanica", "infraspecific_name": "strain=LMG 22958", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/12", "asm_name": "ASM1050091v1", "asm_submitter": "Zhejiang Wanli University", "gbrs_paired_asm": "GCA_010500915.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/010/500/915/GCF_010500915.1_ASM1050091v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4068222", "genome_size_ungapped": "4068036", "gc_percent": "44.000000", "replicon_count": "0", "scaffold_count": "31", "contig_count": "31", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_010500915.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "3493", "protein_coding_gene_count": "3398", "non_coding_gene_count": "82", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-12", "dateModified": "2020-02-12", "datePublished": "2020-02-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Alteromonas hispanica" ], "sample_taxid": [ "315421" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not applicable" ], "sample_host_location_id": [], "data_size": "1.163 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4068222", "Number of Sequences": "31", "Longest Sequences (bp)": "709485", "N50 (bp)": "307433", "Gap Ratio (%)": "0.004572", "GCcontent (%)": "43.8", "Number of CDSs": "3424", "Average Protein Length": "346.3", "Coding Ratio (%)": "87.4", "Number of rRNAs": "2", "Number of tRNAs": "63", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Alteromonas hispanica", "strain": "strain=LMG 22958", "accession": "GCA_010500915.1", "taxid": 315421, "species_taxid": 315421, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1344, "total_fragments": 1345, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Alteromonas genovensis", "strain": "strain=LMG 24078", "accession": "GCA_010500895.1", "taxid": 471225, "species_taxid": 471225, "relation_to_type": "type", "validated": true, "ani": 82.2152, "matched_fragments": 771, "total_fragments": 1345, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas abrolhosensis", "strain": "strain=PEL67E", "accession": "GCA_001953635.1", "taxid": 1892904, "species_taxid": 1892904, "relation_to_type": "type", "validated": true, "ani": 80.0196, "matched_fragments": 405, "total_fragments": 1345, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas gracilis", "strain": "strain=9a2", "accession": "GCA_002993325.1", "taxid": 1479524, "species_taxid": 1479524, "relation_to_type": "type", "validated": true, "ani": 79.8812, "matched_fragments": 416, "total_fragments": 1345, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas 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