{
    "type": "genome",
    "identifier": "GCF_010671825.1",
    "organism": "Micromonospora terminaliae",
    "title": "Micromonospora terminaliae",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "King Mongkut's Institute of Technology Ladkrabang",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_010671825.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN14073151",
        "wgs_master": "JAAHBZ000000000.1",
        "refseq_category": "na",
        "taxid": "1914461",
        "species_taxid": "1914461",
        "organism_name": "Micromonospora terminaliae",
        "infraspecific_name": "strain=TMS7",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/02/16",
        "asm_name": "ASM1067182v1",
        "asm_submitter": "King Mongkut's Institute of Technology Ladkrabang",
        "gbrs_paired_asm": "GCA_010671825.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/010/671/825/GCF_010671825.1_ASM1067182v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6699733",
        "genome_size_ungapped": "6699733",
        "gc_percent": "73.500000",
        "replicon_count": "0",
        "scaffold_count": "40",
        "contig_count": "40",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_010671825.1-RS_2024_03_29",
        "annotation_date": "2024-03-29",
        "total_gene_count": "6322",
        "protein_coding_gene_count": "6164",
        "non_coding_gene_count": "63",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-02-16",
    "dateModified": "2020-02-16",
    "datePublished": "2020-02-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Micromonospora terminaliae"
        ],
        "sample_taxid": [
            "1914461"
        ],
        "sample_host_organism": [
            "Terminalia mucronata"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Thailand: Ubon Ratchathani"
        ],
        "sample_host_location_id": [],
        "data_size": "1.766 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6699733",
        "Number of Sequences": "40",
        "Longest Sequences (bp)": "978803",
        "N50 (bp)": "411775",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "73.4",
        "Number of CDSs": "6318",
        "Average Protein Length": "319.6",
        "Coding Ratio (%)": "90.4",
        "Number of rRNAs": "3",
        "Number of tRNAs": "80",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Micromonospora terminaliae",
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                "species_taxid": 1914461,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 2217,
                "total_fragments": 2218,
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                "status": "inconclusive"
            },
            {
                "organism_name": "Micromonospora terminaliae",
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                "species_taxid": 1914461,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
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                "accession": "GCA_900091435.1",
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                "validated": true,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
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                "accession": "GCA_014648395.1",
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                "species_taxid": 47860,
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                "validated": true,
                "ani": 92.717,
                "matched_fragments": 1871,
                "total_fragments": 2218,
                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Micromonospora chersina",
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                "species_taxid": 47854,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.6401,
                "matched_fragments": 1825,
                "total_fragments": 2218,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora ferruginea",
                "strain": "strain=28ISP2-46",
                "accession": "GCA_013694245.1",
                "taxid": 2749844,
                "species_taxid": 2749844,
                "relation_to_type": "type",
                "validated": true,
                "ani": 88.0051,
                "matched_fragments": 1575,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora phytophila",
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                "accession": "GCA_023656545.1",
                "taxid": 709888,
                "species_taxid": 709888,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.7522,
                "matched_fragments": 1202,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora acroterricola",
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                "species_taxid": 2202421,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora humida",
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                "accession": "GCA_016901255.1",
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                "species_taxid": 2809018,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.8523,
                "matched_fragments": 1398,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora phaseoli",
                "strain": "strain=NBRC 110907",
                "accession": "GCA_016863675.1",
                "taxid": 1144548,
                "species_taxid": 1144548,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.4418,
                "matched_fragments": 1296,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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                "accession": "GCF_900091435.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora",
                "ani_circumscription_radius": 95.0,
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                "min_intra_species_ani": "95.15",
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                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
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            {
                "accession": "GCF_008868175.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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    "_bac2feature": {
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    "quality": 4,
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}