# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:6..365(-)	frameshift		461,310	WP_003416897.1	sigma-70 family RNA polymerase sigma factor SigH	67.2	36.6	51.2
MGA_5	LOCUS_00050	sequence1:4805..5293(+)	frameshift		4808	WP_011731441.1	class I SAM-dependent methyltransferase	98.8	64.8	57.5
MGA_10	LOCUS_00100	sequence1:9211..9495(-)	frameshift		9521	WP_013230605.1	peroxiredoxin-like family protein	93.6	41.7	35.2
MGA_11	LOCUS_00110	sequence1:9498..9938(-)	frameshift		9521	WP_013230605.1	peroxiredoxin-like family protein	74.7	51.5	44.5
MGA_12	LOCUS_00120	sequence1:10120..11217(+)	partial			WP_011729073.1	GMC family oxidoreductase N-terminal domain-containing protein	88.2	64.3	62.7
MGA_15	LOCUS_00150	sequence1:13449..15233(-)	partial			WP_193484808.1	hypothetical protein	13.3	58.0	46.2
MGA_16	LOCUS_00160	sequence1:15937..16692(-)	partial			WP_013226556.1	tyrosine-type recombinase/integrase	75.3	54.0	33.0
MGA_19	LOCUS_00190	sequence1:18354..18713(+)	partial			WP_011729073.1	GMC family oxidoreductase N-terminal domain-containing protein	91.6	21.8	66.1
MGA_23	LOCUS_00230	sequence1:21909..22070(+)	frameshift		21895	WP_011726806.1	GMC family oxidoreductase	96.2	9.8	78.4
MGA_28	LOCUS_00280	sequence1:26427..27677(+)	partial			WP_013229184.1	SpoIIE family protein phosphatase	58.9	63.5	50.4
MGA_36	LOCUS_00360	sequence1:33996..36029(-)	partial			WP_001291001.1	CHASE2 domain-containing protein	31.2	28.2	35.9
MGA_43	LOCUS_00430	sequence1:42855..43175(-)	frameshift		43234	WP_003899614.1	ATP-binding protein	93.4	39.9	65.7
MGA_45	LOCUS_00450	sequence1:43672..44463(-)	frameshift		44585	WP_003414864.1	IS21-like element ISMbo1 family transposase	98.1	62.5	47.7
MGA_46	LOCUS_00460	sequence1:44463..44888(-)	frameshift		44585	WP_003414864.1	IS21-like element ISMbo1 family transposase	91.5	29.8	44.7
MGA_70	LOCUS_00700	sequence1:70367..71251(-)	partial			WP_067118245.1	LLM class F420-dependent oxidoreductase	67.3	69.0	38.9
MGA_77	LOCUS_00770	sequence1:77676..78140(-)	partial			WP_003408538.1	hypothetical protein	47.4	54.9	61.6
MGA_108	LOCUS_01080	sequence1:111435..112778(-)	partial			WP_010920958.1	aromatic ring-hydroxylating dioxygenase subunit alpha	50.1	56.9	32.3
MGA_116	LOCUS_01160	sequence1:119181..119348(-)	partial			WP_003400629.1	hypothetical protein	98.2	41.9	51.9
MGA_123	LOCUS_01230	sequence1:125229..125942(-)	partial			WP_004195335.1	GntR family transcriptional regulator	70.0	66.8	33.9
MGA_125	LOCUS_01250	sequence1:126827..127852(+)	frameshift		127807	WP_010957528.1	MFS transporter	91.8	68.2	37.9
MGA_126	LOCUS_01260	sequence1:127843..128250(+)	frameshift		127807	WP_010957755.1	MFS transporter	80.7	26.2	44.0
MGA_128	LOCUS_01280	sequence1:129320..130276(+)	frameshift		130120	WP_003403601.1	alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase	77.0	64.6	29.5
MGA_136	LOCUS_01360	sequence1:136485..136871(-)	partial			WP_003406577.1	DUF3558 domain-containing protein	100.0	69.2	55.5
MGA_140	LOCUS_01400	sequence1:139464..140090(-)	partial			WP_003400961.1	TetR/AcrR family transcriptional regulator	72.6	53.6	31.8
MGA_144	LOCUS_01440	sequence1:144297..145913(+)	partial			WP_003905649.1	PE family protein	24.3	21.2	60.3
MGA_157	LOCUS_01570	sequence1:157492..157914(+)	frameshift		157893	WP_005089437.1	SDR family oxidoreductase	93.6	56.7	58.8
MGA_158	LOCUS_01580	sequence1:157850..158179(+)	frameshift		157893	WP_011728668.1	SDR family oxidoreductase	81.7	38.5	57.3
MGA_179	LOCUS_01790	sequence1:180853..181935(+)	frameshift		181902	WP_041322279.1	long-chain-fatty-acid--AMP ligase FadD32	98.6	56.3	70.7
MGA_180	LOCUS_01800	sequence1:181932..182774(+)	frameshift		181917	WP_005112890.1	long-chain-fatty-acid--AMP ligase FadD32	95.4	41.9	64.8
MGA_194	LOCUS_01940	sequence1:198041..198847(+)	partial			WP_037392461.1	AraC family transcriptional regulator	85.4	69.1	30.6
MGA_256	LOCUS_02560	sequence1:262800..263438(+)	frameshift		262768	WP_003400961.1	TetR/AcrR family transcriptional regulator	98.6	74.6	72.7
MGA_264	LOCUS_02640	sequence1:270892..272673(-)	partial			WP_003901256.1	PPE family protein	77.6	67.3	49.0
MGA_288	LOCUS_02880	sequence1:295771..296640(-)	frameshift		296666	WP_050754218.1	DDE-type integrase/transposase/recombinase	88.6	66.4	48.3
MGA_325	LOCUS_03250	sequence1:329456..329839(-)	frameshift		329841	WP_003401102.1	phosphodiester glycosidase family protein	100.0	34.4	91.3
MGA_326	LOCUS_03260	sequence1:329836..330549(-)	frameshift		329841	WP_003899845.1	phosphodiester glycosidase family protein	99.6	62.9	80.1
MGA_336	LOCUS_03360	sequence1:339494..341083(+)	frameshift		341023	WP_010950358.1	beta-glucosidase	93.6	71.6	74.5
MGA_337	LOCUS_03370	sequence1:341080..341631(+)	frameshift		341023	WP_003401122.1	beta-glucosidase	99.5	26.3	72.5
MGA_342	LOCUS_03420	sequence1:346316..347332(+)	partial			WP_003908487.1	Ig-like domain-containing protein	77.2	73.9	85.8
MGA_343	LOCUS_03430	sequence1:347360..348250(+)	partial			WP_003916225.1	L,D-transpeptidase LdtMt4	82.4	66.7	70.1
MGA_362	LOCUS_03620	sequence1:373733..374161(-)	partial			WP_013228395.1	CD225/dispanin family protein	58.5	65.1	46.4
MGA_393	LOCUS_03910	sequence2:19115..19957(+)	frameshift		18917	WP_003904477.1	IS110-like element IS1547 family transposase	91.4	70.6	37.3
MGA_413	LOCUS_04110	sequence2:38998..39327(+)	internal_stop_codon	38785..38787(+)		WP_003416932.1	Rv3235 family protein	100.0	52.6	69.6
MGA_414	LOCUS_04120	sequence2:39366..39830(+)	partial			WP_012803747.1	SRPBCC family protein	77.3	63.4	36.8
MGA_429	LOCUS_04270	sequence2:56277..56927(-)	frameshift		56967	WP_012804646.1	class I SAM-dependent methyltransferase	97.2	75.2	34.1
MGA_432	LOCUS_04300	sequence2:58244..59242(-)	partial			WP_037392461.1	AraC family transcriptional regulator	61.4	62.7	35.3
MGA_433	LOCUS_04310	sequence2:59293..60258(-)	partial			WP_004523980.1	helix-turn-helix domain-containing protein	29.6	30.4	33.7
MGA_463	LOCUS_04610	sequence2:91516..91971(+)	partial			WP_003899995.1	manganese-exporting P-type ATPase CtpC	95.4	20.1	83.3
MGA_475	LOCUS_04730	sequence2:105040..105702(+)	frameshift		104983	WP_003899998.1	GtrA family protein	100.0	82.0	84.4
MGA_479	LOCUS_04770	sequence2:108754..108993(+)	partial			WP_010886160.1	acyl-CoA carboxylase subunit epsilon	97.5	44.1	66.7
MGA_485	LOCUS_04830	sequence2:113644..114042(+)	partial			WP_011727905.1	STAS domain-containing protein	65.9	61.3	48.3
MGA_488	LOCUS_04860	sequence2:115639..115950(-)	frameshift		115968,115989,115950	WP_003417162.1	protein UsfY	99.0	74.5	75.5
MGA_494	LOCUS_04920	sequence2:123832..124971(-)	partial			WP_003899026.1	PPE family protein	55.9	50.1	33.0
MGA_524	LOCUS_05220	sequence2:152621..153217(+)	partial			WP_003905037.1	IS110 family transposase	96.5	33.5	85.9
MGA_525	LOCUS_05230	sequence2:153292..154623(+)	partial			WP_003420809.1	PE family protein	24.4	21.4	40.7
MGA_536	LOCUS_05340	sequence2:166723..167454(-)	partial			WP_003417452.1	NADP-dependent isocitrate dehydrogenase	91.8	54.5	89.2
MGA_537	LOCUS_05350	sequence2:167584..168306(+)	partial			WP_204525119.1	IS30-like element ISCfr4 family transposase	97.1	58.3	40.7
MGA_538	LOCUS_05360	sequence2:168793..169587(+)	partial			WP_003913073.1	reverse transcriptase domain-containing protein	55.3	62.6	62.6
MGA_539	LOCUS_05370	sequence2:169590..170528(+)	frameshift		169560	WP_000561483.1	group II intron reverse transcriptase/maturase	53.8	36.0	34.7
MGA_540	LOCUS_05380	sequence2:170510..170878(+)	frameshift		170480	WP_204525119.1	IS30-like element ISCfr4 family transposase	87.7	27.7	60.7
MGA_541	LOCUS_05390	sequence2:170849..171445(-)	partial			WP_003417452.1	NADP-dependent isocitrate dehydrogenase	93.9	45.5	91.9
MGA_553	LOCUS_05510	sequence2:186181..186819(+)	partial			WP_005093224.1	TetR/AcrR family transcriptional regulator	71.7	78.9	33.3
MGA_567	LOCUS_05650	sequence2:201385..201828(+)	partial			WP_003408545.1	ATP transporter ATP-binding protein/permease	57.8	12.1	48.6
MGA_590	LOCUS_05880	sequence2:228429..229265(-)	partial			WP_003418011.1	anti-sigma D factor RsdA	61.9	57.5	73.8
MGA_596	LOCUS_05940	sequence2:232707..233321(+)	partial			WP_011727227.1	superoxide dismutase family protein	67.2	69.5	48.2
MGA_598	LOCUS_05960	sequence2:234861..235253(-)	partial			WP_012256499.1	ester cyclase	56.9	26.8	41.9
MGA_646	LOCUS_06440	sequence2:281180..282622(+)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	56.5	28.9	46.0
MGA_689	LOCUS_06870	sequence2:319927..320778(-)	internal_stop_codon	320782..320784(-)		WP_003898561.1	arylsulfatase AtsA	100.0	36.0	82.0
MGA_690	LOCUS_06880	sequence2:320782..322299(-)	internal_stop_codon	320782..320784(-)		WP_003898561.1	arylsulfatase AtsA	99.2	63.7	90.6
MGA_705	LOCUS_07030	sequence2:331272..331991(+)	partial			WP_010950373.1	PE family protein	41.0	11.8	56.1
MGA_735	LOCUS_07330	sequence2:359034..359993(+)	frameshift		359897	WP_003414864.1	IS21-like element ISMbo1 family transposase	90.0	70.5	49.0
MGA_736	LOCUS_07340	sequence2:359945..360259(+)	frameshift		359900	WP_014001845.1	IS21 family transposase	93.3	23.1	43.3
MGA_737	LOCUS_07350	sequence2:360683..361075(+)	frameshift		360696,360813	WP_003899614.1	ATP-binding protein	63.8	33.5	66.3
MGA_740	LOCUS_07380	sequence2:363046..363774(-)	partial			WP_003403413.1	DNA-directed RNA polymerase subunit beta'	100.0	18.4	97.9
MGA_741	LOCUS_07390	sequence2:363663..366725(-)	partial			WP_003403413.1	DNA-directed RNA polymerase subunit beta'	89.0	69.0	95.5
MGA_751	LOCUS_07490	sequence2:381241..381666(+)	frameshift		381579	WP_011727620.1	DinB family protein	74.5	60.0	80.0
MGA_752	LOCUS_07500	sequence2:381576..381773(+)	frameshift		381579	WP_011727620.1	DinB family protein	98.5	36.6	67.2
MGA_774	LOCUS_07720	sequence2:398081..398764(-)	partial			WP_012258317.1	class I SAM-dependent methyltransferase	80.2	71.8	48.1
MGA_779	LOCUS_07770	sequence2:407781..408410(-)	frameshift		408433	WP_003420557.1	class I SAM-dependent methyltransferase	99.0	65.6	53.6
MGA_780	LOCUS_07780	sequence2:408407..408727(-)	frameshift		408433	WP_003420557.1	class I SAM-dependent methyltransferase	90.6	30.6	49.0
MGA_791	LOCUS_07890	sequence2:420466..420765(-)	partial			WP_003894957.1	hypothetical protein	61.6	73.5	60.7
MGA_799	LOCUS_07970	sequence2:425984..426325(-)	partial			WP_081656034.1	zf-TFIIB domain-containing protein	65.5	64.3	44.6
MGA_815	LOCUS_08130	sequence2:441645..441956(+)	partial			WP_014876727.1	ferredoxin--NADP reductase	92.2	26.8	67.4
MGA_828	LOCUS_08260	sequence2:451330..452088(+)	partial			WP_010867504.1	tyrosine recombinase XerA	84.5	65.4	28.2
MGA_830	LOCUS_08280	sequence2:452591..454576(+)	partial			WP_193484808.1	hypothetical protein	12.0	58.0	46.2
MGA_842	LOCUS_08400	sequence2:465795..466481(+)	partial			WP_010908794.1	hypothetical protein	65.8	73.4	63.3
MGA_854	LOCUS_08520	sequence2:475870..477726(-)	partial			WP_003900169.1	hypothetical protein	74.4	74.8	50.5
MGA_970	LOCUS_09680	sequence2:592670..593632(+)	partial			WP_011707188.1	esterase FrsA	82.5	66.8	25.8
MGA_1085	LOCUS_10830	sequence2:709145..710920(+)	frameshift		708964,708869	WP_011727124.1	Hsp70 family protein	86.0	83.9	42.6
MGA_1094	LOCUS_10900	sequence2:721460..724489(+)	partial			WP_003401734.1	(Fe-S)-binding protein	73.7	83.1	84.8
MGA_1101	LOCUS_10970	sequence2:729712..731226(-)	frameshift,internal_stop_codon	729654..729656(-),729561..729563(-),729560..729562(-)	729722,729613	WP_011727115.1	hypothetical protein	62.1	55.9	43.4
MGA_1102	LOCUS_10980	sequence2:731353..733047(-)	frameshift,internal_stop_codon	733023..733025(-),733116..733118(-),733022..733024(-),732779..732781(-)	733184,733075,733030	WP_011727115.1	hypothetical protein	74.5	73.7	37.8
MGA_1106	LOCUS_11020	sequence2:736246..736890(-)	frameshift		736906	WP_011729718.1	NAD(P)/FAD-dependent oxidoreductase	97.7	40.3	52.6
MGA_1107	LOCUS_11030	sequence2:736877..737872(-)	frameshift		736912	WP_011729718.1	NAD(P)/FAD-dependent oxidoreductase	93.1	59.5	58.3
MGA_1114	LOCUS_11100	sequence2:742232..743464(+)	partial			WP_003694771.1	cupin domain-containing protein	59.5	61.5	22.0
MGA_1116	LOCUS_11120	sequence2:744411..745490(+)	partial			WP_000682355.1	hypothetical protein	60.7	62.0	40.8
MGA_1130	LOCUS_11260	sequence2:758260..759636(-)	partial			WP_011727115.1	hypothetical protein	69.2	57.1	36.4
MGA_1131	LOCUS_11270	sequence2:759709..761607(-)	partial			WP_003401607.1	Hsp70 family protein	73.6	75.5	65.5
MGA_1165	LOCUS_11610	sequence2:798335..798910(+)	partial			WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2')-Ic	56.0	59.1	79.4
MGA_1211	LOCUS_12070	sequence2:852044..853114(+)	partial			WP_011074089.1	sensor domain-containing diguanylate cyclase	53.7	40.4	35.8
MGA_1231	LOCUS_12270	sequence2:872058..872429(-)	partial			WP_003246252.1	nitrite reductase small subunit NirD	71.5	83.0	35.2
MGA_1238	LOCUS_12340	sequence2:881266..883761(+)	partial			WP_099318959.1	PE family protein	14.1	25.5	40.2
MGA_1258	LOCUS_12530	sequence3:18254..18655(+)	partial			WP_011729104.1	cupin domain-containing protein	98.5	73.7	66.4
MGA_1280	LOCUS_12750	sequence3:42252..42758(-)	frameshift		42784	WP_209912946.1	IS481 family transposase	91.1	38.3	47.1
MGA_1281	LOCUS_12760	sequence3:42746..43438(-)	frameshift		42784	WP_209912946.1	IS481 family transposase	91.3	52.1	52.9
MGA_1283	LOCUS_12780	sequence3:44569..45057(+)	frameshift		44551	WP_014467524.1	SDR family oxidoreductase	100.0	66.4	74.1
MGA_1292	LOCUS_12870	sequence3:57663..59048(+)	partial			WP_003862296.1	HIRAN domain-containing protein	59.2	60.1	35.8
MGA_1294	LOCUS_12890	sequence3:63313..65733(+)	partial			WP_011030180.1	BREX-2 system adenine-specific DNA-methyltransferase PglX	98.8	66.3	46.2
MGA_1296	LOCUS_12910	sequence3:67052..68539(+)	partial			WP_003901078.1	IS256-like element IS1081 family transposase	68.7	81.9	81.2
MGA_1298	LOCUS_12930	sequence3:70056..70382(-)	frameshift		70363	WP_002456225.1	tyrosine recombinase XerC	69.4	25.7	40.8
MGA_1299	LOCUS_12940	sequence3:70340..70813(-)	frameshift,internal_stop_codon	70340..70342(-)	70306	WP_015703420.1	site-specific tyrosine recombinase XerD	56.1	31.2	39.8
MGA_1301	LOCUS_12960	sequence3:71191..71433(+)	partial			WP_003904572.1	IS256-like element IS1081 family transposase	88.8	18.1	65.3
MGA_1302	LOCUS_12970	sequence3:71901..73001(+)	partial			WP_011030180.1	BREX-2 system adenine-specific DNA-methyltransferase PglX	100.0	31.0	44.6
MGA_1315	LOCUS_13100	sequence3:94350..95600(+)	partial			WP_073950391.1	ATP-binding protein	96.6	47.8	31.4
MGA_1316	LOCUS_13110	sequence3:95584..96786(+)	frameshift,internal_stop_codon	95598..95600(+)	95651	WP_073950391.1	ATP-binding protein	79.0	37.7	35.8
MGA_1322	LOCUS_13170	sequence3:100677..101945(+)	partial			WP_011036282.1	SDR family oxidoreductase	64.5	82.6	37.7
MGA_1327	LOCUS_13220	sequence3:105723..106103(+)	partial			WP_011730364.1	MMPL family transporter	94.4	15.7	73.1
MGA_1382	LOCUS_13770	sequence3:161155..161529(-)	partial			WP_146729243.1	DoxX family protein	81.5	74.8	40.6
MGA_1393	LOCUS_13880	sequence3:168662..168877(+)	partial			WP_003416383.1	hypothetical protein	94.4	60.9	79.1
MGA_1401	LOCUS_13960	sequence3:176241..176717(+)	partial			WP_003416124.1	hypothetical protein	46.2	49.7	64.4
MGA_1407	LOCUS_14020	sequence3:181736..182368(-)	partial			WP_011727524.1	DUF4352 domain-containing protein	62.4	61.9	41.0
MGA_1420	LOCUS_14150	sequence3:195977..196552(-)	partial			WP_011015467.1	LGFP repeat-containing protein	68.6	23.0	27.6
MGA_1438	LOCUS_14330	sequence3:214488..215117(-)	partial			WP_003917120.1	DUF732 domain-containing protein	73.7	84.0	37.7
MGA_1446	LOCUS_14410	sequence3:221844..226919(+)	frameshift,internal_stop_codon	226917..226919(+),226876..226878(+),226875..226877(+)	226745,222987,226854	WP_010886165.1	PE family protein	7.0	7.7	60.5
MGA_1448	LOCUS_14430	sequence3:227883..229268(-)	frameshift		227906	WP_003901535.1	sulfatase-like hydrolase/transferase	98.5	75.3	83.3
MGA_1450	LOCUS_14450	sequence3:229613..230014(+)	partial			WP_003416061.1	LLM class F420-dependent oxidoreductase	75.2	36.4	52.0
MGA_1462	LOCUS_14570	sequence3:245475..245801(-)	frameshift		245782	WP_002456225.1	tyrosine recombinase XerC	69.4	25.7	40.8
MGA_1463	LOCUS_14580	sequence3:245759..246232(-)	frameshift,internal_stop_codon	245759..245761(-)	245725	WP_015703420.1	site-specific tyrosine recombinase XerD	56.1	31.2	39.8
MGA_1465	LOCUS_14600	sequence3:246591..247163(-)	frameshift		247186	WP_003901078.1	IS256-like element IS1081 family transposase	92.1	42.2	81.7
MGA_1466	LOCUS_14610	sequence3:247097..247651(-)	frameshift		247186	WP_003901078.1	IS256-like element IS1081 family transposase	84.2	37.3	75.5
MGA_1474	LOCUS_14690	sequence3:253163..253915(-)	partial			WP_030872867.1	hypothetical protein	26.4	54.1	43.9
MGA_1477	LOCUS_14720	sequence3:255473..257467(+)	partial			WP_010950451.1	PE family protein	20.2	16.1	42.5
MGA_1480	LOCUS_14750	sequence3:259937..260533(-)	partial			WP_013226070.1	TetR/AcrR family transcriptional regulator	69.2	65.2	41.8
MGA_1483	LOCUS_14780	sequence3:264088..264909(+)	frameshift		264885	WP_003901078.1	IS256-like element IS1081 family transposase	97.4	64.1	78.9
MGA_1484	LOCUS_14790	sequence3:264927..265148(+)	frameshift		264885	WP_003904572.1	IS256-like element IS1081 family transposase	79.5	14.0	79.3
MGA_1485	LOCUS_14800	sequence3:265218..265982(+)	frameshift,internal_stop_codon	265674..265676(+)	265739,265980,265583	WP_013223859.1	tyrosine recombinase XerC	88.2	59.8	29.8
MGA_1486	LOCUS_14810	sequence3:265940..266266(+)	frameshift		265958	WP_002456225.1	tyrosine recombinase XerC	69.4	25.7	40.8
MGA_1487	LOCUS_14820	sequence3:266263..268227(+)	partial			WP_060486301.1	site-specific tyrosine recombinase XerD	19.4	40.4	33.3
MGA_1488	LOCUS_14830	sequence3:268619..268852(+)	partial			WP_005112064.1	acyl-CoA dehydrogenase family protein	72.7	10.3	75.0
MGA_1489	LOCUS_14840	sequence3:268890..269915(+)	partial			WP_037392461.1	AraC family transcriptional regulator	59.8	62.7	36.3
MGA_1509	LOCUS_15040	sequence3:291995..292342(-)	partial			WP_011730106.1	OB-fold domain-containing protein	79.1	16.7	40.2
MGA_1510	LOCUS_15050	sequence3:292392..293585(+)	partial			WP_011730106.1	OB-fold domain-containing protein	98.7	69.3	43.5
MGA_1530	LOCUS_15250	sequence3:313025..313381(+)	partial			WP_011729798.1	LLM class F420-dependent oxidoreductase	83.9	31.2	68.7
MGA_1531	LOCUS_15260	sequence3:313378..314352(+)	partial			WP_037392461.1	AraC family transcriptional regulator	50.9	50.3	37.6
MGA_1572	LOCUS_15670	sequence3:352711..353091(+)	partial			WP_014466936.1	DUF4383 domain-containing protein	78.6	66.2	71.7
MGA_1606	LOCUS_16010	sequence3:386985..387959(+)	frameshift		386929	WP_011726641.1	MinD/ParA family protein	84.6	58.6	36.7
MGA_1607	LOCUS_16020	sequence3:388260..389264(+)	partial			WP_011726641.1	MinD/ParA family protein	87.7	63.5	36.9
MGA_1628	LOCUS_16230	sequence3:408641..409306(+)	partial			WP_003415107.1	DNA-binding protein HupB	47.5	49.1	97.1
MGA_1638	LOCUS_16330	sequence3:418005..418733(-)	partial			WP_172451240.1	nuclear transport factor 2 family protein	93.4	60.7	48.5
MGA_1655	LOCUS_16500	sequence3:435522..436364(-)	frameshift		436561	WP_003904477.1	IS110-like element IS1547 family transposase	91.4	70.6	37.3
MGA_1699	LOCUS_16940	sequence3:481850..482344(-)	partial			WP_003414678.1	M23 family metallopeptidase	96.3	63.5	73.4
MGA_1706	LOCUS_17010	sequence3:487388..487864(+)	partial			WP_005112731.1	DUF1942 domain-containing protein	72.8	58.2	40.2
MGA_1733	LOCUS_17280	sequence3:514436..515365(-)	partial			WP_003409061.1	PPE family protein	65.4	44.3	38.0
MGA_1736	LOCUS_17310	sequence3:517068..518036(-)	internal_stop_codon	517068..517070(-)		WP_003414559.1	HoxN/HupN/NixA family nickel/cobalt transporter	96.6	82.5	78.8
MGA_1752	LOCUS_17470	sequence3:535206..538007(+)	partial			WP_003899505.1	translation initiation factor IF-2	66.8	69.2	93.3
MGA_1852	LOCUS_18470	sequence3:631331..631633(-)	internal_stop_codon	631331..631333(-)		WP_003899440.1	RidA family protein	100.0	70.4	80.0
MGA_1860	LOCUS_18550	sequence3:637236..637622(+)	partial			WP_003413930.1	dUTP diphosphatase	89.1	74.0	85.1
MGA_1891	LOCUS_18860	sequence3:666015..667061(+)	partial			WP_028174358.1	helix-turn-helix domain-containing protein	68.7	72.7	29.3
MGA_1893	LOCUS_18880	sequence3:668624..668923(+)	partial			WP_011726806.1	GMC family oxidoreductase	97.0	18.4	68.8
MGA_1894	LOCUS_18890	sequence3:668928..669191(+)	partial			WP_099042453.1	GMC family oxidoreductase N-terminal domain-containing protein	97.7	15.2	67.1
MGA_1895	LOCUS_18900	sequence3:669341..669994(+)	partial			WP_000639024.1	alpha/beta hydrolase	95.4	69.7	37.5
MGA_1923	LOCUS_19180	sequence3:693513..693821(+)	partial			WP_003413588.1	helix-turn-helix domain-containing protein	68.6	31.2	55.7
MGA_1958	LOCUS_19530	sequence3:724149..725912(+)	partial			WP_003413385.1	protein translocase subunit SecD	64.7	67.2	85.8
MGA_1963	LOCUS_19580	sequence3:732071..733768(-)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	48.1	44.6	58.6
MGA_1982	LOCUS_19770	sequence3:750360..751553(-)	partial			WP_002121854.1	hypothetical protein	78.3	68.0	32.6
MGA_1986	LOCUS_19810	sequence3:756573..757325(-)	partial			WP_003911922.1	DUF2189 domain-containing protein	97.2	74.5	54.3
MGA_2016	LOCUS_20110	sequence3:785556..786149(+)	partial			WP_003407180.1	lipoprotein LprF	100.0	70.9	73.6
MGA_2029	LOCUS_20240	sequence3:800455..800772(+)	frameshift		800400,800325	WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	84.8
MGA_2054	LOCUS_20490	sequence3:825711..827033(+)	partial			WP_003898492.1	HNH endonuclease signature motif containing protein	81.1	71.4	54.0
MGA_2056	LOCUS_20510	sequence3:827144..827539(+)	frameshift,internal_stop_codon	827537..827539(+)	827683,827548,827109	WP_003903979.1	recombinase family protein	87.0	24.5	52.6
MGA_2057	LOCUS_20520	sequence3:827446..827745(+)	frameshift,internal_stop_codon	827537..827539(+)	827689,827548	WP_003903979.1	recombinase family protein	60.6	15.4	43.1
MGA_2058	LOCUS_20530	sequence3:827670..828299(+)	frameshift,internal_stop_codon	827537..827539(+)	827689,827548	WP_003903979.1	recombinase family protein	98.1	43.5	55.8
MGA_2060	LOCUS_20550	sequence3:829125..830594(+)	frameshift		830288,830561	WP_003903975.1	phage/plasmid primase, P4 family	27.6	28.7	74.1
MGA_2061	LOCUS_20560	sequence3:830560..831198(+)	frameshift		830561,830291	WP_003903975.1	phage/plasmid primase, P4 family	98.1	44.2	58.2
MGA_2073	LOCUS_20680	sequence3:837441..837755(+)	internal_stop_codon	837393..837395(+)		WP_003401938.1	HNH endonuclease signature motif containing protein	83.7	20.2	62.2
MGA_2085	LOCUS_20800	sequence3:852101..853114(-)	partial			WP_010886115.1	hypothetical protein	14.8	24.3	64.0
MGA_2095	LOCUS_20900	sequence3:862948..863298(+)	partial			WP_005114376.1	FKBP-type peptidyl-prolyl cis-trans isomerase	98.3	64.8	74.6
MGA_2114	LOCUS_21090	sequence3:883225..883992(+)	frameshift		883905	WP_003902080.1	suf operon transcriptional regulator SufR	87.1	82.8	83.8
MGA_2124	LOCUS_21190	sequence3:892154..892678(-)	partial			WP_005082270.1	DUF5666 domain-containing protein	98.9	71.9	45.5
MGA_2159	LOCUS_21540	sequence3:927578..928765(+)	partial			WP_003899159.1	hypothetical protein	55.9	68.4	36.2
MGA_2171	LOCUS_21660	sequence3:941153..942622(+)	partial			WP_010941286.1	glycosyltransferase family 2 protein	43.1	64.9	32.4
MGA_2187	LOCUS_21820	sequence3:965147..965932(+)	frameshift,internal_stop_codon	965046..965048(+)	965009,965147,965102	WP_003407670.1	class I SAM-dependent methyltransferase	100.0	75.2	85.4
MGA_2209	LOCUS_22040	sequence3:1008230..1010083(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	50.7	53.4	55.0
MGA_2210	LOCUS_22050	sequence3:1010098..1011978(-)	partial			WP_003898998.1	serine/threonine protein kinase PknE	50.6	58.1	50.0
MGA_2228	LOCUS_22230	sequence3:1030032..1030382(-)	partial			WP_013226453.1	helix-turn-helix domain-containing protein	81.9	65.1	53.7
MGA_2242	LOCUS_22370	sequence3:1047659..1048537(-)	partial			WP_003407798.1	NlpC/P60 family peptidoglycan-binding protein RipD	51.0	64.8	87.9
MGA_2269	LOCUS_22640	sequence3:1073553..1075019(-)	partial			WP_011727267.1	serine/threonine-protein kinase	57.4	56.7	64.1
MGA_2278	LOCUS_22730	sequence3:1083951..1084343(+)	partial			WP_003408004.1	TM2 domain-containing protein	83.1	73.3	77.8
MGA_2300	LOCUS_22950	sequence3:1107331..1109415(+)	partial			WP_011729255.1	serine/threonine-protein kinase	52.9	73.8	54.4
MGA_2309	LOCUS_23040	sequence3:1121769..1122215(-)	frameshift,internal_stop_codon	1122221..1122223(-)	1122346	WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	96.6	24.2	38.9
MGA_2310	LOCUS_23050	sequence3:1122222..1123511(-)	partial			WP_010950585.1	serine/threonine protein kinase PknE	82.8	63.4	59.3
MGA_2326	LOCUS_23210	sequence3:1140419..1141864(+)	partial			WP_010950570.1	PE domain-containing protein	64.0	30.0	42.8
MGA_2327	LOCUS_23220	sequence3:1142039..1143874(+)	partial			WP_003420809.1	PE family protein	61.5	77.4	37.1
MGA_2329	LOCUS_23240	sequence3:1144570..1151679(+)	partial			WP_003411972.1	PE family protein	12.9	77.5	30.5
MGA_2343	LOCUS_23380	sequence3:1178503..1179258(-)	frameshift		1179449	WP_003901231.1	cytochrome P450	100.0	59.1	74.0
MGA_2344	LOCUS_23390	sequence3:1179330..1179797(-)	frameshift		1179449	WP_003901231.1	cytochrome P450	72.9	26.3	78.8
MGA_2353	LOCUS_23480	sequence3:1188607..1189749(+)	partial			WP_003404782.1	serine/threonine protein kinase PknD	81.1	43.4	42.1
MGA_2398	LOCUS_23930	sequence3:1244430..1244723(-)	partial			WP_003895709.1	VOC family protein	91.8	64.5	40.0
MGA_2404	LOCUS_23990	sequence3:1248939..1249697(+)	frameshift		1249682	WP_011730531.1	4Fe-4S binding protein	98.4	72.2	81.1
MGA_2405	LOCUS_24000	sequence3:1249718..1249969(+)	frameshift		1249682	WP_011730531.1	4Fe-4S binding protein	96.4	23.2	85.0
MGA_2407	LOCUS_24020	sequence3:1250504..1251103(-)	frameshift,internal_stop_codon	1251190..1251192(-)	1251180	WP_003408495.1	hypothetical protein	86.9	67.6	78.6
MGA_2415	LOCUS_24100	sequence3:1262129..1262614(+)	partial			WP_013225359.1	YbhB/YbcL family Raf kinase inhibitor-like protein	95.7	45.2	58.4
MGA_2422	LOCUS_24170	sequence3:1268906..1269619(-)	partial			WP_157890372.1	(2Fe-2S)-binding protein	74.7	84.6	62.4
MGA_2423	LOCUS_24180	sequence3:1269723..1270181(+)	partial			WP_037399409.1	AraC family transcriptional regulator	71.7	31.5	42.2
MGA_2425	LOCUS_24200	sequence3:1272628..1273287(+)	frameshift		1273278	WP_011729279.1	acyltransferase	94.5	46.8	64.7
MGA_2428	LOCUS_24230	sequence3:1275491..1276375(-)	partial			WP_010942960.1	DUF1295 domain-containing protein	67.0	76.2	33.7
MGA_2431	LOCUS_24260	sequence3:1279410..1279958(-)	partial			WP_011730617.1	hypothetical protein	68.1	68.4	42.0
MGA_2439	LOCUS_24340	sequence3:1290599..1290814(+)	frameshift,internal_stop_codon	1290556..1290558(+)	1290600	WP_003894739.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	88.7	29.0	43.8
MGA_2440	LOCUS_24350	sequence3:1290860..1291285(+)	frameshift		1291162	WP_003414864.1	IS21-like element ISMbo1 family transposase	91.5	29.8	44.7
MGA_2441	LOCUS_24360	sequence3:1291285..1292076(+)	frameshift		1291162	WP_003414864.1	IS21-like element ISMbo1 family transposase	98.1	62.5	47.7
MGA_2444	LOCUS_24390	sequence3:1294104..1294568(-)	internal_stop_codon	1294065..1294067(-),1294104..1294106(-)		WP_011728985.1	DUF5994 family protein	87.7	80.8	65.9
MGA_2465	LOCUS_24600	sequence3:1319150..1319806(+)	frameshift		1319144,1319804	WP_003408560.1	FAD-dependent oxidoreductase	100.0	47.4	79.8
MGA_2466	LOCUS_24610	sequence3:1319898..1320383(+)	frameshift		1319803	WP_003408560.1	FAD-dependent oxidoreductase	100.0	35.0	73.3
MGA_2474	LOCUS_24690	sequence3:1328415..1329248(-)	internal_stop_codon	1329291..1329293(-)		WP_011730134.1	M24 family metallopeptidase	99.3	72.9	62.5
MGA_2475	LOCUS_24700	sequence3:1329291..1329536(-)	internal_stop_codon	1329291..1329293(-)		WP_011730134.1	M24 family metallopeptidase	100.0	21.5	70.4
MGA_2502	LOCUS_24970	sequence3:1357567..1358955(-)	partial			WP_011726824.1	aromatic ring-hydroxylating dioxygenase subunit alpha	42.6	48.7	35.3
MGA_2505	LOCUS_25000	sequence3:1361437..1361673(-)	partial			WP_037394027.1	dihydrolipoamide acetyltransferase family protein	93.6	17.4	40.5
MGA_2506	LOCUS_25010	sequence3:1361666..1362664(-)	frameshift		1362701	WP_013228884.1	alpha-ketoacid dehydrogenase subunit alpha/beta	94.9	47.9	51.6
MGA_2518	LOCUS_25130	sequence3:1373733..1375559(-)	partial			WP_011015416.1	cytochrome b/b6 domain-containing protein	52.0	48.7	41.1
MGA_2528	LOCUS_25230	sequence3:1388059..1388382(+)	partial			WP_003406566.1	DUF732 domain-containing protein	79.4	73.5	38.8
MGA_2581	LOCUS_25760	sequence3:1450039..1450428(-)	frameshift		1450448	WP_003409319.1	LLM class F420-dependent oxidoreductase	100.0	42.0	77.5
MGA_2582	LOCUS_25770	sequence3:1450425..1450970(-)	frameshift		1450451	WP_003409319.1	LLM class F420-dependent oxidoreductase	93.9	55.4	82.4
MGA_2587	LOCUS_25820	sequence3:1454665..1455789(+)	partial			WP_003409337.1	adhesin Apa	50.3	57.5	76.1
MGA_2614	LOCUS_26090	sequence3:1482779..1482982(-)	partial			WP_003895017.1	(2Fe-2S)-binding protein	61.2	59.4	61.0
MGA_2652	LOCUS_26470	sequence3:1517162..1517458(+)	partial			WP_003409543.1	anti-sigma factor antagonist	98.0	67.1	78.1
MGA_2707	LOCUS_27020	sequence3:1563605..1563850(-)	partial			WP_003723640.1	elongation factor Tu	95.1	20.5	43.2
MGA_2756	LOCUS_27510	sequence3:1607361..1608974(+)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	57.4	58.2	46.3
MGA_2757	LOCUS_27520	sequence3:1609096..1610916(+)	partial			WP_003405919.1	PPE family protein	29.0	28.5	60.2
MGA_2762	LOCUS_27570	sequence3:1614420..1615793(-)	partial			WP_003409179.1	PPE family protein	73.5	84.4	37.1
MGA_2764	LOCUS_27590	sequence3:1619941..1620891(+)	partial			WP_013229059.1	NlpC/P60 family protein	32.0	36.3	36.7
MGA_2766	LOCUS_27610	sequence3:1622567..1623262(+)	frameshift		1622971	WP_013531929.1	FAD-dependent monooxygenase	60.2	28.4	70.5
MGA_2767	LOCUS_27620	sequence3:1623199..1624041(+)	frameshift		1622971	WP_010968019.1	FAD-dependent monooxygenase	98.2	54.2	69.4
MGA_2771	LOCUS_27660	sequence3:1625093..1625350(+)	partial			WP_011731120.1	hypothetical protein	65.9	77.8	50.0
MGA_2775	LOCUS_27700	sequence3:1630655..1632046(+)	partial			WP_010886177.1	PE family protein	26.3	20.9	57.4
MGA_2780	LOCUS_27750	sequence3:1634990..1635541(+)	partial			WP_011727649.1	SHOCT domain-containing protein	54.1	37.1	35.2
MGA_2802	LOCUS_27970	sequence3:1652368..1654332(-)	partial			WP_060486301.1	site-specific tyrosine recombinase XerD	19.4	40.4	33.3
MGA_2803	LOCUS_27980	sequence3:1654329..1654655(-)	frameshift		1654636	WP_002456225.1	tyrosine recombinase XerC	69.4	25.7	40.8
MGA_2804	LOCUS_27990	sequence3:1654613..1655086(-)	frameshift,internal_stop_codon	1654613..1654615(-)	1654579	WP_015703420.1	site-specific tyrosine recombinase XerD	56.1	31.2	39.8
MGA_2806	LOCUS_28010	sequence3:1655445..1655666(-)	frameshift		1655826,1655706	WP_003904572.1	IS256-like element IS1081 family transposase	79.5	14.0	79.3
MGA_2807	LOCUS_28020	sequence3:1655719..1656504(-)	frameshift		1655826,1655706	WP_003901078.1	IS256-like element IS1081 family transposase	86.6	54.5	78.3
MGA_2812	LOCUS_28070	sequence3:1659707..1660645(+)	partial			WP_010938064.1	GGDEF domain-containing protein	47.1	51.4	36.9
MGA_2834	LOCUS_28290	sequence3:1681874..1682254(-)	partial			WP_011727909.1	hypothetical protein	73.0	79.3	45.7
MGA_2866	LOCUS_28610	sequence3:1710413..1715428(-)	frameshift		1715463	WP_010950651.1	type I polyketide synthase	98.4	39.8	73.3
MGA_2867	LOCUS_28620	sequence3:1715425..1721676(-)	frameshift		1720289,1721678,1715465,1715466,1720238	WP_010886138.1	type I polyketide synthase	99.7	50.1	78.5
MGA_2868	LOCUS_28630	sequence3:1721673..1722830(-)	frameshift		1721678	WP_010886138.1	type I polyketide synthase	99.7	9.3	90.7
MGA_2871	LOCUS_28660	sequence3:1723907..1724704(-)	frameshift,internal_stop_codon	1724701..1724703(-)	1724737	WP_003902238.1	apolipoprotein N-acyltransferase	100.0	30.7	82.1
MGA_2872	LOCUS_28670	sequence3:1724714..1726516(-)	frameshift,internal_stop_codon	1724714..1724716(-),1724701..1724703(-)	1724737	WP_003902238.1	apolipoprotein N-acyltransferase	89.5	60.9	76.9
MGA_2874	LOCUS_28690	sequence3:1728158..1728460(-)	partial			WP_200876602.1	PP2C family protein-serine/threonine phosphatase	75.0	15.9	55.3
MGA_2884	LOCUS_28790	sequence3:1737509..1738900(+)	partial			WP_003912345.1	HNH endonuclease signature motif containing protein	84.2	73.8	56.6
MGA_2885	LOCUS_28800	sequence3:1739012..1739728(+)	frameshift		1739546,1738982,1739543	WP_003903979.1	recombinase family protein	73.1	35.2	45.9
MGA_2886	LOCUS_28810	sequence3:1739616..1740167(+)	frameshift		1739545,1739542	WP_003903979.1	recombinase family protein	98.4	38.0	53.3
MGA_2888	LOCUS_28830	sequence3:1740991..1742442(+)	frameshift		1742514,1742427,1742508	WP_003903975.1	phage/plasmid primase, P4 family	47.4	48.4	69.9
MGA_2889	LOCUS_28840	sequence3:1742530..1743063(+)	frameshift		1742427,1742508,1742517	WP_003903975.1	phage/plasmid primase, P4 family	98.3	36.9	56.9
MGA_2900	LOCUS_28950	sequence3:1749528..1749731(-)	frameshift		1749745	WP_011729370.1	LLM class flavin-dependent oxidoreductase	100.0	18.2	92.5
MGA_2901	LOCUS_28960	sequence3:1749683..1750621(-)	frameshift		1749745	WP_005080059.1	LLM class flavin-dependent oxidoreductase	94.9	81.1	76.7
MGA_2903	LOCUS_28980	sequence3:1751731..1752387(-)	frameshift		1751688,1751757	WP_011729372.1	ABC transporter ATP-binding protein	90.4	81.6	83.0
MGA_2905	LOCUS_29000	sequence3:1753260..1753865(-)	frameshift,internal_stop_codon	1754048..1754050(-)	1753897	WP_003404651.1	NAD(P)/FAD-dependent oxidoreductase	99.0	40.2	52.3
MGA_2906	LOCUS_29010	sequence3:1754048..1754221(-)	frameshift,internal_stop_codon	1754048..1754050(-)	1753897,1754348	WP_003404651.1	NAD(P)/FAD-dependent oxidoreductase	78.9	9.1	64.4
MGA_2907	LOCUS_29020	sequence3:1754142..1754717(-)	frameshift,internal_stop_codon	1754048..1754050(-)	1754357,1753903	WP_005113127.1	NAD(P)/FAD-dependent oxidoreductase	58.6	22.7	57.5
MGA_2910	LOCUS_29050	sequence3:1755832..1756524(+)	frameshift		1756098,1756227,1755812,1756394,1756107,1756240,1755667,1756092,1756286,1756479	WP_003900454.1	precorrin-3B synthase	59.1	39.4	60.8
MGA_2911	LOCUS_29060	sequence3:1756529..1756795(+)	frameshift		1756777,1757012,1757006	WP_003410658.1	precorrin-8X methylmutase	94.3	39.9	84.3
MGA_2913	LOCUS_29070	sequence4:132..1523(+)	partial			WP_003912345.1	HNH endonuclease signature motif containing protein	84.2	73.8	56.6
MGA_2914	LOCUS_29080	sequence4:1429..2355(+)	frameshift		2166	WP_003903979.1	recombinase family protein	81.2	51.4	40.8
MGA_2915	LOCUS_29090	sequence4:2243..2794(+)	frameshift		2166	WP_003903979.1	recombinase family protein	98.4	38.0	53.3
MGA_2917	LOCUS_29110	sequence4:3911..5068(+)	frameshift		4780,5140,5134	WP_003903975.1	phage/plasmid primase, P4 family	35.1	28.7	74.1
MGA_2918	LOCUS_29120	sequence4:5156..5689(+)	frameshift		5133,5142	WP_003903975.1	phage/plasmid primase, P4 family	98.3	36.9	56.9
MGA_2928	LOCUS_29220	sequence4:12159..13085(-)	frameshift		13087	WP_011729370.1	LLM class flavin-dependent oxidoreductase	100.0	84.5	81.0
MGA_2929	LOCUS_29230	sequence4:13079..13252(-)	frameshift		13087	WP_005080059.1	LLM class flavin-dependent oxidoreductase	96.5	15.1	72.7
MGA_2930	LOCUS_29240	sequence4:13259..13861(-)	frameshift		13932	WP_011729371.1	ABC transporter substrate-binding protein	98.0	57.6	67.9
MGA_2931	LOCUS_29250	sequence4:13867..14268(-)	frameshift		13932	WP_011729371.1	ABC transporter substrate-binding protein	79.7	31.2	75.5
MGA_2937	LOCUS_29310	sequence4:18120..19007(+)	frameshift		18899	WP_003900454.1	precorrin-3B synthase	87.8	71.3	69.5
MGA_2938	LOCUS_29320	sequence4:18911..19207(+)	frameshift		18899	WP_003900454.1	precorrin-3B synthase	96.9	26.2	78.9
MGA_2945	LOCUS_29390	sequence4:27652..28095(+)	partial			WP_013226556.1	tyrosine-type recombinase/integrase	89.8	41.7	32.9
MGA_2946	LOCUS_29400	sequence4:28598..30580(+)	partial			WP_193484808.1	hypothetical protein	12.0	58.0	46.2
MGA_2949	LOCUS_29430	sequence4:32747..33916(-)	partial			WP_011729073.1	GMC family oxidoreductase N-terminal domain-containing protein	94.9	73.7	62.3
MGA_2950	LOCUS_29440	sequence4:34217..34546(+)	frameshift,internal_stop_codon	34535..34537(+)	34513,34540	WP_013230605.1	peroxiredoxin-like family protein	64.2	34.5	57.7
MGA_2951	LOCUS_29450	sequence4:34539..34823(+)	frameshift,internal_stop_codon	34535..34537(+)	34513,34540	WP_013230605.1	peroxiredoxin-like family protein	93.6	41.7	35.2
MGA_2958	LOCUS_29520	sequence4:40843..41112(-)	frameshift		41129	WP_003114565.1	YiiD C-terminal domain-containing protein	97.8	58.0	41.4
MGA_2960	LOCUS_29530	sequence5:400..636(-)	frameshift		756,710	WP_011729073.1	GMC family oxidoreductase N-terminal domain-containing protein	88.5	13.8	71.0
MGA_2965	LOCUS_29580	sequence5:2978..3175(+)	partial			WP_011228341.1	tyrosine-type recombinase/integrase	81.5	16.9	47.2
MGA_2968	LOCUS_29610	sequence5:4495..6198(+)	partial			WP_193484808.1	hypothetical protein	13.2	55.1	46.1
MGA_2970	LOCUS_29630	sequence5:7801..8985(-)	partial			WP_011729073.1	GMC family oxidoreductase N-terminal domain-containing protein	91.9	72.3	63.3
MGA_2973	LOCUS_29660	sequence5:10984..11706(+)	frameshift		10976	WP_011729253.1	metal-dependent hydrolase	92.1	73.9	54.3
MGA_2986	LOCUS_29790	sequence5:22749..23564(-)	partial			WP_013228906.1	SDR family NAD(P)-dependent oxidoreductase	71.2	76.3	36.3
MGA_2993	LOCUS_29860	sequence5:29034..29819(+)	frameshift		28917	WP_013225407.1	alpha/beta hydrolase	98.9	80.6	57.4
MGA_2998	LOCUS_29910	sequence5:33206..33451(-)	partial			WP_003407374.1	lysophospholipid acyltransferase family protein	93.8	26.5	40.8
MGA_3008	LOCUS_30010	sequence5:43428..44576(-)	partial			WP_011030349.1	FxSxx-COOH system tetratricopeptide repeat protein	43.5	19.9	33.5
MGA_3017	LOCUS_30100	sequence5:53113..53679(-)	internal_stop_codon	53686..53688(-)		WP_003405605.1	hypothetical protein	34.0	64.3	61.4
MGA_3060	LOCUS_30530	sequence5:97896..98408(+)	partial			WP_003416599.1	TetR/AcrR family transcriptional regulator	58.8	48.1	35.0
MGA_3094	LOCUS_30870	sequence5:133042..134301(+)	partial			WP_011267118.1	bifunctional diguanylate cyclase/phosphodiesterase	62.3	45.3	32.6
MGA_3099	LOCUS_30920	sequence5:136763..137053(-)	frameshift		137180,137045	WP_003904572.1	IS256-like element IS1081 family transposase	54.2	12.5	73.1
MGA_3100	LOCUS_30930	sequence5:137221..137463(-)	frameshift		137522,137180,137045	WP_003904572.1	IS256-like element IS1081 family transposase	96.2	18.6	85.7
MGA_3101	LOCUS_30940	sequence5:137469..137828(-)	frameshift		137522	WP_003904572.1	IS256-like element IS1081 family transposase	71.4	20.5	69.4
MGA_3103	LOCUS_30960	sequence5:139011..139613(+)	frameshift		139065	WP_005115911.1	alpha/beta hydrolase	84.5	56.6	48.5
MGA_3104	LOCUS_30970	sequence5:139574..140554(-)	frameshift		140537,140468	WP_164929392.1	IS3-like element ISGvi5 family transposase	82.5	67.8	48.4
MGA_3105	LOCUS_30980	sequence5:141402..141773(-)	partial			WP_011085528.1	amidohydrolase family protein	83.7	28.6	32.7
MGA_3131	LOCUS_31240	sequence5:167500..170595(-)	partial			WP_012634405.1	intein-containing DNA gyrase subunit A	73.2	60.4	88.6
MGA_3171	LOCUS_31640	sequence5:218354..219283(-)	partial			WP_010907486.1	MinD/ParA family protein	96.1	50.7	69.7
MGA_3185	LOCUS_31780	sequence5:234292..234582(+)	frameshift		234260	WP_003899734.1	transcriptional regulator WhiB6	100.0	82.8	88.5
MGA_3203	LOCUS_31960	sequence5:252981..253712(-)	frameshift,internal_stop_codon	252830..252832(-)	253028	WP_003399745.1	TMEM165/GDT1 family protein	95.9	76.5	60.7
MGA_3209	LOCUS_32020	sequence5:258841..259752(-)	partial			WP_235624060.1	LCP family protein	96.7	68.5	68.9
MGA_3214	LOCUS_32070	sequence5:262893..263243(-)	frameshift,internal_stop_codon	262893..262895(-)	262853	WP_003899719.1	metallopeptidase family protein	99.1	83.9	79.1
MGA_3260	LOCUS_32530	sequence5:325208..325708(-)	partial			WP_008633832.1	GTP cyclohydrolase I FolE	74.1	59.7	36.6
MGA_3288	LOCUS_32810	sequence5:346313..347398(+)	partial			WP_000105143.1	exodeoxyribonuclease VIII	85.9	34.2	28.8
MGA_3303	LOCUS_32960	sequence5:354988..355608(-)	partial			WP_003900538.1	tyrosine-type recombinase/integrase	86.9	53.0	43.0
MGA_3304	LOCUS_32970	sequence5:355926..356213(-)	partial			WP_011728011.1	YchJ family protein	92.6	68.2	50.0
MGA_3347	LOCUS_33400	sequence5:397304..398542(+)	partial			WP_005809350.1	alkyl/aryl-sulfatase	70.9	67.1	31.2
MGA_3350	LOCUS_33430	sequence5:399780..400751(+)	partial			WP_013222574.1	LLM class flavin-dependent oxidoreductase	57.0	56.2	30.3
MGA_3360	LOCUS_33530	sequence5:410377..410796(+)	partial			WP_013531661.1	hypothetical protein	66.2	69.0	35.3
MGA_3383	LOCUS_33760	sequence5:435422..436279(+)	partial			WP_000285450.1	HAD family hydrolase	46.0	57.8	35.3
MGA_3386	LOCUS_33790	sequence5:437629..437802(-)	partial			WP_003855652.1	CsbD family protein	80.7	74.6	62.0
MGA_3396	LOCUS_33890	sequence5:446866..447684(-)	partial			WP_003420421.1	lipid uptake coordinator LucA	50.4	53.9	74.5
MGA_3398	LOCUS_33910	sequence5:449462..451276(+)	partial			WP_003420417.1	DNA polymerase III subunits gamma/tau	64.7	67.6	88.0
MGA_3403	LOCUS_33960	sequence5:455357..455728(+)	partial			WP_003420408.1	YbaB/EbfC family nucleoid-associated protein	75.6	69.9	82.8
MGA_3419	LOCUS_34120	sequence5:469068..469496(+)	partial			WP_003419814.1	hypothetical protein	64.8	69.8	40.9
MGA_3432	LOCUS_34250	sequence5:484724..485428(-)	partial			WP_050039320.1	PadR family transcriptional regulator	61.5	76.6	81.2
MGA_3444	LOCUS_34370	sequence5:495055..496002(+)	partial			WP_197530111.1	SRPBCC family protein	58.1	72.8	45.9
MGA_3450	LOCUS_34430	sequence5:499805..502018(-)	partial			WP_013227688.1	SpoIIE family protein phosphatase	84.9	45.8	43.1
MGA_3451	LOCUS_34440	sequence5:502015..502665(-)	frameshift		502666	WP_013224915.1	SpoIIE family protein phosphatase	86.6	49.3	30.5
MGA_3459	LOCUS_34520	sequence5:508001..508963(-)	partial			WP_011403060.1	glycosyltransferase family 4 protein	68.4	59.4	30.8
MGA_3558	LOCUS_35510	sequence5:606041..606250(+)	partial			WP_005065012.1	CbtB-domain containing protein	60.9	61.8	81.0
MGA_3561	LOCUS_35540	sequence5:607634..613510(+)	partial			WP_011031572.1	helix-turn-helix transcriptional regulator	21.2	42.4	32.9
MGA_3579	LOCUS_35720	sequence5:631580..632044(+)	partial			WP_003410786.1	PE family protein	90.9	27.3	33.6
MGA_3590	LOCUS_35830	sequence5:642641..643009(-)	frameshift		643038	WP_204525119.1	IS30-like element ISCfr4 family transposase	87.7	27.7	60.7
MGA_3591	LOCUS_35840	sequence5:642991..643758(-)	frameshift		643020,642717	WP_206612254.1	IS30 family transposase	92.9	44.5	45.2
MGA_3599	LOCUS_35920	sequence5:650291..650803(-)	partial			WP_003894735.1	hypothetical protein	54.7	72.2	32.3
MGA_3608	LOCUS_36010	sequence5:659986..661131(+)	partial			WP_005113186.1	DUF4878 domain-containing protein	73.2	69.5	41.8
MGA_3611	LOCUS_36040	sequence5:663156..665030(+)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	56.7	67.7	32.8
MGA_3635	LOCUS_36280	sequence5:687482..687643(+)	partial			WP_005084617.1	hypothetical protein	88.7	37.4	41.0
MGA_3689	LOCUS_36820	sequence5:740140..742305(+)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	37.3	44.4	64.8
MGA_3696	LOCUS_36890	sequence5:745435..747060(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	51.9	49.3	70.6
MGA_3719	LOCUS_37120	sequence5:768487..770067(-)	partial			WP_011729255.1	serine/threonine-protein kinase	58.4	62.5	60.2
MGA_3734	LOCUS_37270	sequence5:786328..787053(+)	internal_stop_codon	786115..786117(+),786187..786189(+)		WP_010886087.1	hypothetical protein	100.0	75.9	70.7
MGA_3740	LOCUS_37330	sequence5:791514..791993(-)	frameshift		792010,791988	WP_003403998.1	hypothetical protein	93.7	73.9	53.7
MGA_3749	LOCUS_37420	sequence5:798055..798672(-)	frameshift,internal_stop_codon	798687..798689(-)	798677	WP_011728203.1	TetR/AcrR family transcriptional regulator	97.1	44.9	54.8
MGA_3750	LOCUS_37430	sequence5:798687..799388(-)	frameshift,internal_stop_codon	798687..798689(-)	798677	WP_011728203.1	TetR/AcrR family transcriptional regulator	87.1	45.9	67.0
MGA_3753	LOCUS_37460	sequence5:802245..803009(-)	frameshift		803020	WP_050754218.1	DDE-type integrase/transposase/recombinase	87.0	57.1	48.0
MGA_3754	LOCUS_37470	sequence5:802904..803461(-)	frameshift		803020	WP_050754218.1	DDE-type integrase/transposase/recombinase	79.5	39.0	36.4
MGA_3757	LOCUS_37500	sequence5:804637..804936(+)	frameshift		804628	WP_003906521.1	HNH endonuclease signature motif containing protein	97.0	21.3	76.0
MGA_3771	LOCUS_37640	sequence5:818570..820111(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	36.3	31.0	34.4
MGA_3793	LOCUS_37860	sequence5:842654..843364(+)	partial			WP_002456225.1	tyrosine recombinase XerC	77.1	62.5	30.9
MGA_3794	LOCUS_37870	sequence5:843361..845325(+)	partial			WP_060486301.1	site-specific tyrosine recombinase XerD	19.4	40.4	33.3
MGA_3799	LOCUS_37920	sequence5:849704..850594(+)	partial			WP_013389864.1	ParB/RepB/Spo0J family partition protein	50.0	30.5	31.6
MGA_3800	LOCUS_37930	sequence5:850870..851952(+)	partial			WP_003917259.1	hypothetical protein	34.7	41.4	65.6
MGA_3801	LOCUS_37940	sequence5:852012..853052(+)	partial			WP_003400393.1	C40 family peptidase	31.8	39.1	56.4
MGA_3805	LOCUS_37980	sequence5:854746..855231(+)	partial			WP_003414511.1	transcription termination factor NusA	83.9	39.2	47.8
MGA_3820	LOCUS_38130	sequence5:870610..871590(+)	frameshift,internal_stop_codon	871172..871174(+),871118..871120(+),871205..871207(+)	871464,871249,871092,871453	WP_012296241.1	hypothetical protein	88.3	36.6	26.3
MGA_3821	LOCUS_38140	sequence5:871868..872965(+)	frameshift		872829	WP_012296241.1	hypothetical protein	80.5	37.6	37.0
MGA_3825	LOCUS_38180	sequence5:875856..876971(+)	frameshift		876941	WP_014002018.1	type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase EccC2	92.5	25.4	34.3
MGA_3826	LOCUS_38190	sequence5:876961..878298(+)	frameshift		878280,878345,878317,876950	WP_013224114.1	type VII secretion protein EccC	97.3	30.4	33.6
MGA_3827	LOCUS_38200	sequence5:878306..880060(+)	frameshift		878295	WP_041322832.1	type VII secretion protein EccC	99.0	40.4	35.4
MGA_3830	LOCUS_38230	sequence5:881022..882503(+)	partial			WP_003900505.1	PPE family protein	32.7	41.2	36.7
MGA_3836	LOCUS_38290	sequence5:887307..888944(+)	partial			WP_003408854.1	type VII secretion system ESX-5 serine protease mycosin MycP5	61.1	57.4	50.7
MGA_3851	LOCUS_38440	sequence5:906263..907330(+)	frameshift		907063	WP_003917171.1	IS21 family transposase	47.9	42.0	35.5
MGA_3852	LOCUS_38450	sequence5:907246..907764(+)	frameshift		907063	WP_003917171.1	IS21 family transposase	82.0	33.9	27.7
MGA_3856	LOCUS_38490	sequence5:911098..912654(-)	partial			WP_236615816.1	serine/threonine-protein kinase	51.2	46.3	31.3
MGA_3857	LOCUS_38500	sequence5:912861..917663(-)	partial			WP_028385425.1	Ti-type conjugative transfer relaxase TraA	25.4	44.1	23.4
MGA_3875	LOCUS_38680	sequence5:936453..937334(-)	partial			WP_010867504.1	tyrosine recombinase XerA	69.6	61.5	28.4
MGA_3883	LOCUS_38760	sequence5:944108..944497(-)	partial			WP_003416786.1	IS30 family transposase	100.0	37.5	85.3
MGA_3884	LOCUS_38770	sequence5:944682..945392(-)	frameshift		945468	WP_000561483.1	group II intron reverse transcriptase/maturase	71.6	36.0	37.1
MGA_3885	LOCUS_38780	sequence5:946677..947546(-)	partial			WP_003416786.1	IS30 family transposase	66.8	56.1	78.2
MGA_3887	LOCUS_38800	sequence5:948553..949152(-)	partial			WP_013226070.1	TetR/AcrR family transcriptional regulator	43.2	41.0	43.0
MGA_3893	LOCUS_38860	sequence5:956503..956667(+)	partial			WP_003402286.1	DUF5078 domain-containing protein	85.2	31.1	66.0
MGA_3894	LOCUS_38870	sequence5:956707..958164(-)	frameshift		958247	WP_003911183.1	RND transporter MmpL2	97.3	48.8	64.6
MGA_3896	LOCUS_38890	sequence5:958876..959223(-)	frameshift		958931,959276	WP_011729110.1	MMPL family transporter	98.3	11.4	58.4
MGA_3897	LOCUS_38900	sequence5:959265..959642(-)	frameshift		959279	WP_010908861.1	RND family transporter	88.0	11.4	58.2
MGA_3900	LOCUS_38930	sequence5:962589..963266(+)	frameshift		962550	WP_110107303.1	IS1380 family transposase	92.4	42.5	43.4
MGA_3901	LOCUS_38940	sequence5:963280..963651(+)	partial			WP_003422389.1	IS5 family transposase	80.5	73.3	83.8
MGA_3902	LOCUS_38950	sequence5:963591..964121(-)	frameshift		964131,964359	WP_012804326.1	ISL3 family transposase	98.9	40.1	54.3
MGA_3903	LOCUS_38960	sequence5:964091..964249(-)	frameshift		964131,964359	WP_011726739.1	ISL3-like element IS1096 family transposase	76.9	9.1	60.0
MGA_3904	LOCUS_38970	sequence5:964342..964911(-)	frameshift		964368,964131	WP_011015071.1	ISL3-like element IS31831 family transposase	91.0	39.0	40.1
MGA_3905	LOCUS_38980	sequence5:965218..965658(+)	frameshift		965039	WP_003898701.1	IS5 family transposase	90.4	46.0	81.1
MGA_3909	LOCUS_39020	sequence5:969231..969671(-)	frameshift		969723	WP_012296509.1	alpha/beta hydrolase	97.9	44.5	67.1
MGA_3912	LOCUS_39050	sequence5:971540..971875(-)	partial			WP_014207710.1	DUF1446 domain-containing protein	89.2	17.0	41.2
MGA_3918	LOCUS_39110	sequence5:976259..976663(+)	partial			WP_010929743.1	Zn-ribbon domain-containing OB-fold protein	78.4	73.0	41.9
MGA_3919	LOCUS_39120	sequence5:976715..977260(+)	frameshift,internal_stop_codon	976967..976969(+)	976936,977144,977029,977214	WP_011727856.1	IS256 family transposase	79.6	32.8	61.1
MGA_3920	LOCUS_39130	sequence5:977257..977709(+)	frameshift,internal_stop_codon	976966..976968(+)	977143,977213,977031	WP_011727856.1	IS256 family transposase	45.3	15.5	80.9
MGA_3931	LOCUS_39240	sequence5:992046..992294(+)	frameshift		992285,992110,992445	WP_011088683.1	NAD(P)/FAD-dependent oxidoreductase	93.9	16.4	42.5
MGA_3932	LOCUS_39250	sequence5:992326..992913(+)	frameshift		992113,992291,992439	WP_003899731.1	FAD-containing monooxygenase EthA	55.4	23.3	53.5
MGA_3933	LOCUS_39260	sequence5:993009..994208(-)	frameshift,internal_stop_codon	993498..993500(-)	993530,994164,993437,993322	WP_011727856.1	IS256 family transposase	70.7	64.2	70.6
MGA_3939	LOCUS_39320	sequence5:1001729..1001896(+)	partial			WP_169733975.1	IS256 family transposase	90.9	12.3	56.0
MGA_3940	LOCUS_39330	sequence5:1002371..1002643(+)	internal_stop_codon	1002641..1002643(+)		WP_000453500.1	IS110 family transposase	82.2	29.6	44.0
MGA_3941	LOCUS_39340	sequence5:1002683..1003129(+)	internal_stop_codon	1002641..1002643(+)		WP_003900518.1	IS110 family transposase	99.3	44.4	48.6
MGA_3944	LOCUS_39370	sequence5:1003915..1004562(-)	frameshift		1004585	WP_011729600.1	tyrosine-type recombinase/integrase	88.4	25.6	59.5
MGA_3945	LOCUS_39380	sequence5:1004559..1005140(-)	frameshift		1004588	WP_011729600.1	tyrosine-type recombinase/integrase	86.5	22.5	50.3
MGA_3947	LOCUS_39400	sequence5:1006168..1006917(-)	frameshift		1006888	WP_014877954.1	site-specific integrase	93.2	63.1	54.7
MGA_3948	LOCUS_39410	sequence5:1006880..1007266(-)	frameshift		1006891	WP_014877954.1	site-specific integrase	97.7	33.9	56.0
MGA_3949	LOCUS_39420	sequence5:1007527..1008363(+)	frameshift		1007407	WP_211285741.1	IS3 family transposase	100.0	72.7	87.5
MGA_3951	LOCUS_39440	sequence5:1009404..1010183(+)	frameshift		1009377	WP_187436542.1	IS256 family transposase	79.5	46.4	33.2
MGA_3954	LOCUS_39470	sequence5:1012149..1012472(-)	frameshift,internal_stop_codon	1012669..1012671(-)	1012493,1012701,1012605	WP_011727856.1	IS256 family transposase	100.0	24.6	80.6
MGA_3955	LOCUS_39480	sequence5:1013020..1013319(+)	partial			WP_087902221.1	IS3-like element IS987 family transposase	91.9	21.9	75.0
MGA_3957	LOCUS_39500	sequence5:1013736..1014533(-)	frameshift		1014553	WP_011729600.1	tyrosine-type recombinase/integrase	90.9	32.7	55.8
MGA_3958	LOCUS_39510	sequence5:1014485..1015996(-)	frameshift		1014553	WP_011729600.1	tyrosine-type recombinase/integrase	94.0	64.2	40.2
MGA_3959	LOCUS_39520	sequence5:1015962..1016696(-)	frameshift		1016710	WP_014877954.1	site-specific integrase	91.0	60.4	54.5
MGA_3960	LOCUS_39530	sequence5:1016693..1017085(-)	frameshift		1016710	WP_014877954.1	site-specific integrase	93.8	33.1	56.6
MGA_3961	LOCUS_39540	sequence5:1017364..1017672(+)	frameshift,internal_stop_codon	1017670..1017672(+)	1017696,1017226,1017732,1017599	WP_087902221.1	IS3-like element IS987 family transposase	100.0	37.6	46.8
MGA_3963	LOCUS_39560	sequence5:1019840..1020682(+)	partial			WP_070909991.1	metal-dependent hydrolase	41.1	40.5	67.0
MGA_3972	LOCUS_39650	sequence5:1030591..1030947(-)	frameshift,internal_stop_codon	1030575..1030577(-),1031166..1031168(-)	1030964,1030670	WP_015776578.1	ISL3 family transposase	83.9	22.7	47.5
MGA_3973	LOCUS_39660	sequence5:1030833..1031150(-)	frameshift,internal_stop_codon	1030575..1030577(-),1031166..1031168(-)	1030964,1030670	WP_141270575.1	ISL3-like element ISAar39 family transposase	59.0	14.2	74.2
MGA_3974	LOCUS_39670	sequence5:1031166..1031792(-)	frameshift,internal_stop_codon	1031166..1031168(-)	1030964	WP_011014093.1	ISL3-like element IS31831 family transposase	99.0	47.7	45.7
MGA_3985	LOCUS_39780	sequence5:1043497..1044681(-)	partial			WP_013227554.1	hypothetical protein	66.2	66.2	29.6
MGA_3989	LOCUS_39820	sequence5:1049612..1050859(-)	frameshift,internal_stop_codon	1049611..1049613(-)	1050963	WP_003899145.1	carboxylesterase/lipase family protein	99.8	81.0	65.9
MGA_3997	LOCUS_39900	sequence5:1058323..1058685(+)	partial			WP_010940871.1	PaaI family thioesterase	83.3	62.3	32.7
MGA_3999	LOCUS_39920	sequence5:1058877..1059449(-)	frameshift		1059484	WP_005086426.1	RND family transporter	97.4	18.6	56.2
MGA_4000	LOCUS_39930	sequence5:1059353..1060750(-)	frameshift		1060923,1060805,1059478	WP_235623866.1	RND family transporter	90.8	41.4	31.8
MGA_4001	LOCUS_39940	sequence5:1060741..1061286(-)	frameshift,internal_stop_codon	1061395..1061397(-)	1060923,1060805	WP_003898915.1	RND transporter MmpL12	72.4	11.4	46.6
MGA_4002	LOCUS_39950	sequence5:1061395..1062468(-)	frameshift		1062551	WP_003911183.1	RND transporter MmpL2	96.4	35.5	69.2
MGA_4003	LOCUS_39960	sequence5:1062468..1064327(-)	frameshift		1062551	WP_003407779.1	MMPL family transporter	93.7	60.0	62.1
MGA_4006	LOCUS_39990	sequence5:1066107..1066688(+)	partial			WP_003419329.1	TetR family transcriptional regulator KstR2	59.6	59.5	31.1
MGA_4009	LOCUS_40020	sequence5:1069244..1070320(+)	partial			WP_000390088.1	site-specific tyrosine recombinase XerD	69.8	72.3	29.6
MGA_4014	LOCUS_40070	sequence5:1073729..1074658(+)	frameshift		1074554,1073741	WP_010967989.1	group II intron reverse transcriptase/maturase	89.0	59.4	42.6
MGA_4015	LOCUS_40080	sequence5:1074655..1075023(+)	frameshift		1074556	WP_235893157.1	group II intron reverse transcriptase/maturase	50.8	10.7	38.7
MGA_4016	LOCUS_40090	sequence5:1075196..1075597(+)	partial			WP_003416786.1	IS30 family transposase	100.0	38.7	63.2
MGA_4017	LOCUS_40100	sequence5:1076029..1077921(+)	partial			WP_003904572.1	IS256-like element IS1081 family transposase	52.1	79.0	79.6
MGA_4018	LOCUS_40110	sequence5:1077879..1078205(+)	frameshift		1077897	WP_002456225.1	tyrosine recombinase XerC	69.4	25.7	40.8
MGA_4020	LOCUS_40130	sequence5:1078837..1080144(+)	partial			WP_060486301.1	site-specific tyrosine recombinase XerD	29.2	40.4	33.3
MGA_4025	LOCUS_40180	sequence5:1083949..1084215(+)	partial			WP_013223345.1	IS3 family transposase	56.8	17.0	71.2
MGA_4026	LOCUS_40190	sequence5:1084745..1085848(+)	frameshift		1085725	WP_010967989.1	group II intron reverse transcriptase/maturase	87.2	68.3	39.6
MGA_4027	LOCUS_40200	sequence5:1085818..1086192(+)	frameshift		1085725	WP_011022639.1	group II intron maturase-specific domain-containing protein	80.6	39.5	32.4
MGA_4044	LOCUS_40370	sequence5:1106344..1106988(-)	partial			WP_010950834.1	transposase	73.8	81.9	75.3
MGA_4045	LOCUS_40380	sequence5:1107127..1107342(-)	frameshift		1107428	WP_003417932.1	histidine phosphatase family protein	97.2	29.2	72.5
MGA_4046	LOCUS_40390	sequence5:1107264..1107785(-)	frameshift		1107428	WP_003417932.1	histidine phosphatase family protein	68.8	50.4	60.5
MGA_4051	LOCUS_40440	sequence5:1109753..1110493(-)	frameshift		1110492	WP_003417892.1	trehalose-phosphatase	98.8	62.1	72.4
MGA_4054	LOCUS_40470	sequence5:1112451..1112786(-)	partial			WP_011071113.1	IS1595-like element ISSod11 family transposase	54.1	19.2	52.5
MGA_4055	LOCUS_40480	sequence5:1112907..1114658(+)	partial			WP_041608957.1	transposase	37.0	72.0	45.8
MGA_4058	LOCUS_40510	sequence5:1117220..1117756(-)	frameshift		1117851,1117727	WP_070909991.1	metal-dependent hydrolase	95.5	60.6	59.5
MGA_4059	LOCUS_40520	sequence5:1117753..1118127(-)	frameshift		1117739,1117851	WP_005081992.1	metal-dependent hydrolase	60.5	24.8	70.7
MGA_4060	LOCUS_40530	sequence5:1118158..1118799(-)	partial			WP_070909991.1	metal-dependent hydrolase	100.0	74.6	62.4
MGA_4073	LOCUS_40660	sequence5:1130637..1131254(+)	partial			WP_010970125.1	site-specific tyrosine recombinase XerD	84.9	49.5	32.8
MGA_4076	LOCUS_40690	sequence5:1132957..1133304(+)	frameshift		1133458,1133271	WP_010950468.1	IS256-like element IS1554 family transposase	90.4	24.1	59.8
MGA_4077	LOCUS_40700	sequence5:1133493..1134263(+)	frameshift		1133274,1133458	WP_003404757.1	IS256-like element IS1554 family transposase	66.4	38.7	65.9
MGA_4080	LOCUS_40730	sequence5:1136397..1136984(-)	partial			WP_002456225.1	tyrosine recombinase XerC	93.3	62.5	30.9
MGA_4083	LOCUS_40760	sequence5:1138731..1139351(+)	partial			WP_014877954.1	site-specific integrase	93.2	52.0	72.9
MGA_4087	LOCUS_40800	sequence5:1143805..1144302(+)	partial			WP_014877954.1	site-specific integrase	100.0	45.0	77.7
MGA_4088	LOCUS_40810	sequence5:1144420..1146369(+)	frameshift		1144805	WP_011729600.1	tyrosine-type recombinase/integrase	78.6	68.7	70.2
MGA_4089	LOCUS_40820	sequence5:1146396..1147268(+)	partial			WP_189955127.1	site-specific integrase	91.7	65.3	38.3
MGA_4092	LOCUS_40850	sequence5:1148262..1149674(-)	partial			WP_003917171.1	IS21 family transposase	59.8	69.3	33.8
MGA_4093	LOCUS_40860	sequence5:1150238..1150750(+)	frameshift		1150955,1150676,1150205	WP_011027876.1	IS110-like element IS117 family transposase	79.4	32.6	62.2
MGA_4095	LOCUS_40880	sequence5:1150949..1151350(+)	frameshift		1150675,1150957	WP_011027876.1	IS110-like element IS117 family transposase	85.7	27.5	63.2
MGA_4096	LOCUS_40890	sequence5:1151524..1151976(+)	partial			WP_189955127.1	site-specific integrase	58.7	22.1	45.5
MGA_4098	LOCUS_40910	sequence5:1154432..1154683(+)	partial			WP_011729600.1	tyrosine-type recombinase/integrase	83.1	9.4	68.6
MGA_4100	LOCUS_40930	sequence5:1155098..1155415(+)	partial			WP_010950468.1	IS256-like element IS1554 family transposase	61.9	14.8	81.5
MGA_4101	LOCUS_40940	sequence5:1155427..1155873(-)	partial			WP_169733975.1	IS256 family transposase	83.8	30.4	62.1
MGA_4102	LOCUS_40950	sequence5:1155933..1156250(-)	partial			WP_050754218.1	DDE-type integrase/transposase/recombinase	71.4	19.9	55.8
MGA_4103	LOCUS_40960	sequence5:1156273..1157100(-)	frameshift		1157107	WP_003911958.1	DDE-type integrase/transposase/recombinase	100.0	71.6	82.2
MGA_4104	LOCUS_40970	sequence5:1157051..1157533(-)	frameshift		1157107	WP_003911958.1	DDE-type integrase/transposase/recombinase	66.2	27.6	84.0
MGA_4115	LOCUS_41080	sequence5:1169539..1169946(-)	partial			WP_003418125.1	IS21-like element ISMt2 family helper ATPase IstB	91.1	49.4	38.7
MGA_4116	LOCUS_41090	sequence5:1170079..1170984(-)	partial			WP_107417457.1	IS481 family transposase	96.3	47.7	33.3
MGA_4121	LOCUS_41140	sequence5:1174153..1175325(-)	partial			WP_010867504.1	tyrosine recombinase XerA	54.6	65.4	28.2
MGA_4122	LOCUS_41150	sequence5:1175420..1175749(-)	frameshift		1175781	WP_107417457.1	IS481 family transposase	92.7	16.6	75.2
MGA_4123	LOCUS_41160	sequence5:1175716..1176339(-)	frameshift		1175784	WP_107417457.1	IS481 family transposase	83.6	28.4	62.4
MGA_4124	LOCUS_41170	sequence5:1176427..1176597(-)	partial			WP_003414201.1	ExeA family protein	96.4	20.0	90.7
MGA_4126	LOCUS_41190	sequence5:1178274..1178804(-)	frameshift		1178414	WP_189742800.1	APC family permease	80.7	22.9	43.3
MGA_4127	LOCUS_41200	sequence5:1178801..1179079(-)	partial			WP_000254889.1	APC family permease	62.0	8.9	52.6
MGA_4129	LOCUS_41220	sequence5:1179325..1180314(-)	frameshift		1179305,1179510	WP_003903345.1	succinyldiaminopimelate transaminase	76.0	69.1	81.6
MGA_4132	LOCUS_41250	sequence5:1181504..1181953(+)	frameshift,internal_stop_codon	1181427..1181429(+)	1181267	WP_085976166.1	IS3 family transposase	91.9	35.2	39.1
MGA_4136	LOCUS_41290	sequence5:1185279..1185827(+)	partial			WP_169733975.1	IS256 family transposase	83.0	37.0	66.2
MGA_4137	LOCUS_41300	sequence5:1185821..1186219(-)	partial			WP_008783747.1	IS30-like element ISBlo4 family transposase	90.2	28.1	55.5
MGA_4141	LOCUS_41340	sequence5:1189227..1189946(-)	frameshift		1190097,1189571,1189652	WP_178372834.1	IS256 family transposase	78.2	45.8	32.8
MGA_4143	LOCUS_41360	sequence5:1191086..1191397(+)	partial			WP_013222026.1	IS110 family transposase	77.7	19.9	53.8
MGA_4146	LOCUS_41390	sequence5:1193068..1193910(+)	frameshift		1193005,1193806	WP_010967989.1	group II intron reverse transcriptase/maturase	88.6	54.3	42.4
MGA_4147	LOCUS_41400	sequence5:1193907..1194275(+)	frameshift		1193808	WP_235893157.1	group II intron reverse transcriptase/maturase	50.8	10.7	38.7
MGA_4148	LOCUS_41410	sequence5:1194323..1194847(+)	partial			WP_003416786.1	IS30 family transposase	87.4	44.2	65.1
MGA_4155	LOCUS_41480	sequence5:1199049..1200356(-)	partial			WP_060486301.1	site-specific tyrosine recombinase XerD	29.2	40.4	33.3
MGA_4157	LOCUS_41500	sequence5:1201219..1203111(-)	partial			WP_003904572.1	IS256-like element IS1081 family transposase	52.1	79.0	79.6
MGA_4193	LOCUS_41860	sequence5:1240864..1242186(+)	partial			WP_011338147.1	VWA domain-containing protein	66.1	47.4	29.1
MGA_4201	LOCUS_41940	sequence5:1247419..1248528(+)	frameshift		1247465	WP_003898611.1	sensor histidine kinase	94.9	82.6	67.5
MGA_4220	LOCUS_42130	sequence5:1272521..1273498(+)	frameshift		1273444	WP_003896962.1	sugar porter family MFS transporter	94.5	65.2	75.9
MGA_4221	LOCUS_42140	sequence5:1273474..1273926(+)	frameshift		1273444	WP_003896962.1	sugar porter family MFS transporter	100.0	31.8	81.3
MGA_4290	LOCUS_42830	sequence5:1340214..1340828(-)	partial			WP_003407152.1	membrane protein	74.5	69.1	49.3
MGA_4291	LOCUS_42840	sequence5:1340825..1341562(-)	partial			WP_011730075.1	membrane protein	82.9	68.0	35.5
MGA_4305	LOCUS_42980	sequence5:1352227..1353207(+)	partial			WP_011730075.1	membrane protein	69.6	73.9	45.2
MGA_4332	LOCUS_43250	sequence5:1378205..1379056(-)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	60.8	40.5	67.4
MGA_4340	LOCUS_43330	sequence5:1385491..1387044(-)	frameshift		1385847	WP_010950465.1	MFS transporter	75.4	70.8	81.5
MGA_4346	LOCUS_43390	sequence5:1390219..1390497(+)	partial			WP_003404614.1	DUF2537 domain-containing protein	73.9	72.3	77.9
MGA_4376	LOCUS_43690	sequence5:1418420..1418827(-)	partial			WP_114555269.1	IS30 family transposase	89.6	36.0	59.5
MGA_4377	LOCUS_43700	sequence5:1419003..1419371(-)	frameshift		1419469	WP_235893157.1	group II intron reverse transcriptase/maturase	50.8	10.7	38.7
MGA_4378	LOCUS_43710	sequence5:1419368..1420297(-)	frameshift		1420284,1419471	WP_010967989.1	group II intron reverse transcriptase/maturase	89.0	59.4	42.6
MGA_4380	LOCUS_43730	sequence5:1421034..1421720(-)	partial			WP_204525119.1	IS30-like element ISCfr4 family transposase	72.4	37.3	43.7
MGA_4383	LOCUS_43760	sequence5:1425001..1425636(-)	frameshift		1425717,1425741	WP_005110186.1	hypothetical protein	85.8	67.3	29.2
MGA_4389	LOCUS_43820	sequence5:1430633..1431811(+)	partial			WP_109721882.1	AAA family ATPase	59.4	33.8	37.1
MGA_4394	LOCUS_43870	sequence5:1434077..1435033(+)	partial			WP_014877012.1	hypothetical protein	52.5	60.5	29.9
MGA_4395	LOCUS_43880	sequence5:1435106..1435744(-)	partial			WP_003909837.1	hypothetical protein	100.0	50.1	50.5
MGA_4416	LOCUS_44090	sequence5:1459977..1460306(+)	frameshift		1460219	WP_010919717.1	enoyl-CoA hydratase/isomerase	86.2	39.3	40.0
MGA_4417	LOCUS_44100	sequence5:1460255..1460794(+)	frameshift		1460216	WP_005086691.1	enoyl-CoA hydratase/isomerase family protein	95.0	63.0	47.6
MGA_4421	LOCUS_44140	sequence5:1464011..1464916(-)	partial			WP_011730613.1	diiron oxygenase	100.0	73.1	74.8
MGA_4423	LOCUS_44160	sequence5:1465914..1466213(+)	partial			WP_010950597.1	PE family protein	100.0	15.9	61.6
MGA_4427	LOCUS_44200	sequence5:1469704..1469973(-)	partial			WP_010907562.1	chorismate mutase	86.5	74.3	82.1
MGA_4429	LOCUS_44220	sequence5:1472717..1473130(-)	frameshift,internal_stop_codon	1473092..1473094(-)	1473082,1473133	WP_011730597.1	hypothetical protein	83.2	50.2	62.3
MGA_4447	LOCUS_44400	sequence5:1493996..1494310(-)	partial			WP_003404920.1	hypothetical protein	93.3	71.2	57.6
MGA_4462	LOCUS_44550	sequence5:1509682..1510026(-)	partial			WP_010907580.1	zinc ribbon domain-containing protein	71.1	81.8	71.6
MGA_4470	LOCUS_44630	sequence5:1517853..1518998(+)	partial			WP_011861579.1	site-specific integrase	70.3	71.8	24.4
MGA_4475	LOCUS_44680	sequence5:1524249..1525655(-)	partial			WP_011031291.1	PIN domain-containing protein	54.5	45.6	24.2
MGA_4496	LOCUS_44890	sequence5:1541531..1541884(-)	frameshift		1542074	WP_005114156.1	hypothetical protein	82.9	35.5	61.6
MGA_4499	LOCUS_44920	sequence5:1544943..1545929(-)	frameshift,internal_stop_codon	1544937..1544939(-)	1544864,1545020,1544804	WP_003910253.1	hypothetical protein	73.2	48.2	39.3
MGA_4504	LOCUS_44970	sequence5:1549938..1550732(-)	partial			WP_164921539.1	FkbM family methyltransferase	55.7	65.2	33.1
MGA_4509	LOCUS_45020	sequence5:1557084..1558586(-)	partial			WP_010889293.1	tyrosine-protein kinase domain-containing protein	58.4	55.2	27.3
MGA_4510	LOCUS_45030	sequence5:1558601..1559494(-)	partial			WP_005081985.1	FkbM family methyltransferase	51.9	64.9	35.8
MGA_4514	LOCUS_45070	sequence5:1562917..1564965(-)	partial			WP_003893217.1	glycosyltransferase family 2 protein	35.2	82.4	30.2
MGA_4517	LOCUS_45100	sequence5:1567967..1568809(-)	partial			WP_012257358.1	WecB/TagA/CpsF family glycosyltransferase	81.1	45.5	35.3
MGA_4521	LOCUS_45140	sequence5:1571040..1571984(-)	frameshift		1571120	WP_003901258.1	PPE family protein	86.0	67.7	37.1
MGA_4553	LOCUS_45460	sequence5:1606207..1607781(-)	partial			WP_003901078.1	IS256-like element IS1081 family transposase	13.7	18.3	65.8
MGA_4555	LOCUS_45480	sequence5:1608413..1608739(-)	frameshift		1608720	WP_002456225.1	tyrosine recombinase XerC	69.4	25.7	40.8
MGA_4556	LOCUS_45490	sequence5:1608697..1609170(-)	frameshift,internal_stop_codon	1608697..1608699(-)	1608663	WP_015703420.1	site-specific tyrosine recombinase XerD	56.1	31.2	39.8
MGA_4558	LOCUS_45510	sequence5:1609529..1609771(-)	internal_stop_codon	1609772..1609774(-)		WP_003904572.1	IS256-like element IS1081 family transposase	81.2	15.7	78.5
MGA_4559	LOCUS_45520	sequence5:1609772..1610590(-)	internal_stop_codon	1609772..1609774(-)		WP_003901078.1	IS256-like element IS1081 family transposase	100.0	65.5	81.2
MGA_4560	LOCUS_45530	sequence5:1610813..1611250(+)	partial			WP_084879622.1	IS110 family transposase	64.8	25.5	42.6
MGA_4567	LOCUS_45600	sequence5:1620013..1620825(-)	frameshift		1620935	WP_003405324.1	HAMP domain-containing sensor histidine kinase	100.0	53.0	77.8
MGA_4568	LOCUS_45610	sequence5:1620762..1621463(-)	frameshift		1620935	WP_003405324.1	HAMP domain-containing sensor histidine kinase	75.1	34.4	66.9
MGA_4578	LOCUS_45710	sequence5:1629129..1630085(+)	frameshift		1629992	WP_003414864.1	IS21-like element ISMbo1 family transposase	90.6	70.7	48.8
MGA_4579	LOCUS_45720	sequence5:1630037..1630351(+)	frameshift		1629992	WP_014001845.1	IS21 family transposase	93.3	23.1	43.3
MGA_4600	LOCUS_45930	sequence5:1660433..1663093(+)	partial			WP_162013089.1	tetratricopeptide repeat protein	41.4	53.9	23.5
MGA_4601	LOCUS_45940	sequence5:1663588..1663896(-)	partial			WP_010950431.1	SHOCT domain-containing protein	100.0	40.8	37.5
MGA_4605	LOCUS_45980	sequence5:1667333..1668928(+)	partial			WP_011388984.1	esterase-like activity of phytase family protein	67.4	83.1	27.9
MGA_4610	LOCUS_46030	sequence5:1670821..1671378(+)	frameshift		1670692	WP_003900263.1	DUF427 domain-containing protein	100.0	72.8	81.6
MGA_4617	LOCUS_46100	sequence5:1678079..1678321(-)	partial			WP_003405645.1	lipoprotein LpqV	100.0	57.6	68.8
MGA_4628	LOCUS_46210	sequence5:1689535..1690209(+)	partial			WP_003405732.1	RDD family protein	74.6	69.6	79.0
MGA_4662	LOCUS_46550	sequence5:1724327..1724734(+)	partial			WP_004266264.1	DUF1801 domain-containing protein	81.5	71.2	53.6
MGA_4665	LOCUS_46580	sequence5:1725969..1726394(-)	partial			WP_003406566.1	DUF732 domain-containing protein	63.8	77.0	33.3
MGA_4667	LOCUS_46600	sequence5:1727231..1727719(+)	partial			WP_003898733.1	hypothetical protein	75.9	53.0	78.9
MGA_4669	LOCUS_46620	sequence5:1728540..1729232(-)	internal_stop_codon	1729281..1729283(-),1729254..1729256(-)		WP_003898734.1	hypothetical protein	97.8	78.7	80.4
MGA_4695	LOCUS_46880	sequence5:1756172..1756834(-)	partial			WP_193484808.1	hypothetical protein	35.9	58.0	46.2
MGA_4698	LOCUS_46910	sequence5:1758659..1759417(-)	partial			WP_010867504.1	tyrosine recombinase XerA	84.5	65.4	28.2
MGA_4708	LOCUS_47010	sequence5:1771483..1773210(+)	partial			WP_110170977.1	VWA domain-containing protein	50.3	44.1	33.3
MGA_4717	LOCUS_47100	sequence5:1781232..1781711(-)	frameshift		1781369	WP_011728944.1	MerR family transcriptional regulator	69.2	40.1	52.3
MGA_4735	LOCUS_47280	sequence5:1797826..1798326(-)	frameshift		1798343	WP_009936776.1	DUF1697 domain-containing protein	99.4	79.8	75.9
MGA_4741	LOCUS_47340	sequence5:1800546..1801655(-)	partial			WP_172591911.1	hypothetical protein	38.2	41.2	84.4
MGA_4742	LOCUS_47350	sequence5:1801702..1802523(-)	frameshift,internal_stop_codon	1801693..1801695(-),1801702..1801704(-)	1801674	WP_003406075.1	hypothetical protein	48.0	57.7	60.6
MGA_4745	LOCUS_47380	sequence5:1804246..1804575(+)	partial			WP_013229630.1	DUF3761 domain-containing protein	61.5	39.1	50.7
MGA_4754	LOCUS_47470	sequence5:1815926..1818223(+)	partial			WP_010886071.1	PE family protein	35.9	27.7	33.9
MGA_4767	LOCUS_47600	sequence5:1832018..1832185(-)	partial			WP_005081166.1	hypothetical protein	60.0	64.7	63.6
MGA_4771	LOCUS_47640	sequence5:1835997..1836464(-)	partial			WP_005114615.1	DUF4190 domain-containing protein	40.6	20.5	53.1
MGA_4780	LOCUS_47730	sequence5:1845562..1845963(-)	frameshift,internal_stop_codon	1845963..1845965(-)	1845944	WP_013224382.1	OB-fold domain-containing protein	95.5	41.7	45.3
MGA_4781	LOCUS_47740	sequence5:1845963..1846505(-)	frameshift,internal_stop_codon	1845963..1845965(-)	1845944	WP_013224382.1	OB-fold domain-containing protein	88.3	50.3	42.8
MGA_4808	LOCUS_48010	sequence5:1877135..1877515(+)	partial			WP_003406258.1	anti-sigma E factor RseA	88.1	72.1	86.5
MGA_4816	LOCUS_48090	sequence5:1884319..1884948(-)	partial			WP_003406288.1	DUF4190 domain-containing protein	42.1	43.9	43.2
MGA_4845	LOCUS_48380	sequence5:1919777..1923724(-)	partial			WP_011037666.1	bifunctional diguanylate cyclase/phosphodiesterase	33.5	54.9	36.7
MGA_4849	LOCUS_48420	sequence5:1926213..1926737(+)	frameshift		1926689	WP_003406372.1	adenylate cyclase	85.1	37.3	79.7
MGA_4850	LOCUS_48430	sequence5:1926734..1927348(+)	frameshift		1926689	WP_003406372.1	adenylate cyclase	95.1	49.6	78.7
MGA_4851	LOCUS_48440	sequence5:1927596..1928177(+)	internal_stop_codon	1927575..1927577(+)		WP_003406375.1	transcriptional regulator AbmR	99.0	82.7	82.2
MGA_4853	LOCUS_48460	sequence5:1930223..1932571(-)	partial			WP_030872986.1	FHA domain-containing protein	79.4	72.8	45.2
MGA_4854	LOCUS_48470	sequence5:1932568..1934283(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	68.7	66.6	67.2
MGA_4855	LOCUS_48480	sequence5:1934411..1936192(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	70.3	68.2	72.9
MGA_4865	LOCUS_48580	sequence5:1945038..1946105(-)	partial			WP_003905037.1	IS110 family transposase	93.2	58.6	35.6
MGA_4886	LOCUS_48790	sequence5:1968674..1969240(+)	partial			WP_003411608.1	hypothetical protein	72.3	80.8	47.1
MGA_4887	LOCUS_48800	sequence5:1969235..1970722(-)	partial			WP_010950570.1	PE domain-containing protein	40.8	18.1	40.1
MGA_4964	LOCUS_49570	sequence5:2055842..2056855(+)	partial			WP_006311526.1	4-hydroxy-tetrahydrodipicolinate synthase	43.0	47.3	28.3
MGA_4975	LOCUS_49680	sequence5:2067171..2068304(+)	partial			WP_010886153.1	alpha/beta hydrolase	72.4	65.9	30.7
MGA_4991	LOCUS_49840	sequence5:2082557..2083387(-)	partial			WP_003407157.1	membrane protein	63.0	66.7	73.6
MGA_5006	LOCUS_49990	sequence5:2098019..2098360(-)	partial			WP_011727849.1	hypothetical protein	73.5	79.4	37.9
MGA_5010	LOCUS_50030	sequence5:2101052..2106907(-)	partial			WP_003911742.1	alpha/beta hydrolase	19.4	58.8	32.0
MGA_5013	LOCUS_50060	sequence5:2107870..2108187(-)	partial			WP_003899734.1	transcriptional regulator WhiB6	65.7	58.6	63.8
MGA_5029	LOCUS_50220	sequence5:2128924..2130318(-)	partial			WP_005056137.1	C40 family peptidase	49.8	47.1	25.2
MGA_5034	LOCUS_50270	sequence5:2133530..2135026(+)	partial			WP_005113178.1	MinD/ParA family protein	66.1	52.7	64.0
MGA_5049	LOCUS_50420	sequence5:2149982..2150422(+)	partial			WP_005064825.1	MaoC family dehydratase	62.3	70.0	40.7
MGA_5062	LOCUS_50550	sequence5:2172640..2173176(-)	partial			WP_003401619.1	DUF3060 domain-containing protein	41.0	33.2	52.1
MGA_5064	LOCUS_50570	sequence5:2173762..2173989(+)	partial			WP_003412942.1	DUF3618 domain-containing protein	68.0	68.0	74.5
MGA_5087	LOCUS_50800	sequence5:2196609..2197160(+)	partial			WP_014206709.1	dienelactone hydrolase family protein	78.1	34.4	43.4
MGA_5088	LOCUS_50810	sequence5:2197243..2197911(+)	partial			WP_003972681.1	allantoin degradation transcriptional regulator AllR	61.3	50.0	40.3
MGA_5090	LOCUS_50830	sequence5:2198901..2199893(+)	partial			WP_004566323.1	TauD/TfdA family dioxygenase	81.5	73.9	31.6
MGA_5185	LOCUS_51770	sequence5:2321571..2321915(-)	partial			WP_010950905.1	PE family protein	98.2	7.7	52.7
MGA_5221	LOCUS_52130	sequence5:2358604..2359701(-)	frameshift,internal_stop_codon	2358604..2358606(-)	2358582	WP_010950755.1	ACR3 family arsenite efflux transporter	95.6	70.1	87.7
MGA_5225	LOCUS_52170	sequence5:2361289..2361717(-)	partial			WP_011030938.1	heavy metal translocating P-type ATPase	86.6	19.3	65.9
MGA_5237	LOCUS_52290	sequence5:2371649..2371993(+)	partial			WP_000179273.1	NADH-quinone oxidoreductase subunit NuoA	66.7	62.3	42.1
MGA_5242	LOCUS_52340	sequence5:2375090..2376922(+)	partial			WP_011142593.1	NADH-quinone oxidoreductase subunit L	55.9	57.9	32.1
MGA_5251	LOCUS_52430	sequence5:2385615..2386052(-)	frameshift,internal_stop_codon	2385591..2385593(-)	2385473,2385617	WP_005112734.1	M56 family metallopeptidase	100.0	46.2	46.2
MGA_5253	LOCUS_52450	sequence5:2386738..2387025(+)	frameshift		2387215,2387076,2387007	WP_076611786.1	IS3-like element ISMsm7 family transposase	94.7	24.4	34.0
MGA_5256	LOCUS_52480	sequence5:2389430..2390050(+)	partial			WP_164929392.1	IS3-like element ISGvi5 family transposase	70.4	36.4	53.7
MGA_5257	LOCUS_52490	sequence5:2390861..2391328(+)	partial			WP_011730262.1	DUF305 domain-containing protein	100.0	66.2	51.9
MGA_5262	LOCUS_52540	sequence5:2396206..2396730(-)	partial			WP_076611786.1	IS3-like element ISMsm7 family transposase	100.0	45.1	90.2
MGA_5263	LOCUS_52550	sequence5:2397119..2399062(-)	partial			WP_060486301.1	site-specific tyrosine recombinase XerD	19.6	40.4	33.3
MGA_5264	LOCUS_52560	sequence5:2399059..2399817(-)	partial			WP_002456225.1	tyrosine recombinase XerC	72.2	62.5	30.9
MGA_5267	LOCUS_52590	sequence5:2401311..2401604(-)	frameshift		2401653,2401614	WP_076611786.1	IS3-like element ISMsm7 family transposase	85.6	21.5	85.5
MGA_5268	LOCUS_52600	sequence5:2401651..2401947(-)	frameshift		2401659,2401614	WP_076611786.1	IS3-like element ISMsm7 family transposase	100.0	25.4	90.8
MGA_5269	LOCUS_52610	sequence5:2401985..2402383(-)	partial			WP_087902221.1	IS3-like element IS987 family transposase	78.8	24.8	83.7
MGA_5272	LOCUS_52640	sequence5:2404588..2405814(+)	partial			WP_011729600.1	tyrosine-type recombinase/integrase	90.0	49.5	54.5
MGA_5275	LOCUS_52670	sequence5:2406490..2406939(-)	partial			WP_083125798.1	IS481 family transposase	87.2	30.8	32.3
MGA_5278	LOCUS_52700	sequence5:2409189..2409614(+)	frameshift		2409491	WP_003414864.1	IS21-like element ISMbo1 family transposase	91.5	29.8	44.7
MGA_5279	LOCUS_52710	sequence5:2409614..2410405(+)	frameshift		2409491	WP_003414864.1	IS21-like element ISMbo1 family transposase	98.1	62.5	47.7
MGA_5281	LOCUS_52730	sequence5:2411339..2411530(-)	internal_stop_codon	2411660..2411662(-)		WP_087902221.1	IS3-like element IS987 family transposase	71.4	10.7	51.1
MGA_5282	LOCUS_52740	sequence5:2411832..2412260(-)	internal_stop_codon	2411660..2411662(-)		WP_164929392.1	IS3-like element ISGvi5 family transposase	95.1	33.9	51.1
MGA_5283	LOCUS_52750	sequence5:2412753..2413691(-)	frameshift		2413714,2412874	WP_010967989.1	group II intron reverse transcriptase/maturase	86.9	58.6	40.7
MGA_5287	LOCUS_52790	sequence5:2416355..2416528(+)	partial			WP_011727856.1	IS256 family transposase	100.0	13.9	73.8
MGA_5290	LOCUS_52820	sequence5:2419776..2420120(-)	partial			WP_076611786.1	IS3-like element ISMsm7 family transposase	95.6	28.2	53.2
MGA_5293	LOCUS_52850	sequence5:2423311..2423640(-)	internal_stop_codon	2423659..2423661(-)		WP_003887884.1	IS3 family transposase	92.7	31.9	52.5
MGA_5294	LOCUS_52860	sequence5:2423659..2424045(-)	frameshift,internal_stop_codon	2423722..2423724(-),2423746..2423748(-),2423644..2423646(-),2423611..2423613(-)	2423760	WP_003899164.1	IS3 family transposase	63.3	39.8	59.3
MGA_5295	LOCUS_52870	sequence5:2424102..2424413(-)	partial			WP_003410726.1	hypothetical protein	63.1	59.4	53.8
MGA_5296	LOCUS_52880	sequence5:2425234..2426688(+)	partial			WP_003899120.1	cation transporter ATPase CptG	97.9	65.1	57.9
MGA_5300	LOCUS_52920	sequence5:2431548..2431886(+)	frameshift		2431639,2431489,2431676,2431471	WP_172463354.1	IS3 family transposase	83.0	24.8	36.4
MGA_5304	LOCUS_52960	sequence5:2435852..2436739(-)	frameshift		2435899	WP_003409179.1	PPE family protein	90.5	71.5	36.4
MGA_5307	LOCUS_52990	sequence5:2442546..2442869(-)	frameshift		2442650	WP_005095802.1	MmpS family transport accessory protein	68.2	55.3	63.0
MGA_5315	LOCUS_53070	sequence5:2452154..2452753(-)	partial			WP_003973221.1	GNAT family N-acetyltransferase	83.9	72.7	50.6
MGA_5320	LOCUS_53120	sequence5:2466988..2467503(-)	partial			WP_005092398.1	SagB family peptide dehydrogenase	100.0	36.0	73.7
MGA_5329	LOCUS_53210	sequence5:2474688..2476811(+)	partial			WP_003412235.1	PhoH family protein	33.4	68.2	89.6
MGA_5351	LOCUS_53430	sequence5:2497566..2498060(+)	partial			WP_003402198.1	superoxide dismutase family protein	54.3	37.1	69.7
MGA_5352	LOCUS_53440	sequence5:2498292..2500256(-)	partial			WP_060486301.1	site-specific tyrosine recombinase XerD	19.4	40.4	33.3
MGA_5353	LOCUS_53450	sequence5:2500253..2500546(-)	frameshift		2500442,2500559	WP_002456225.1	tyrosine recombinase XerC	52.6	17.2	47.1
MGA_5354	LOCUS_53460	sequence5:2500536..2501009(-)	frameshift		2500565	WP_015703420.1	site-specific tyrosine recombinase XerD	56.1	31.2	39.8
MGA_5358	LOCUS_53500	sequence5:2503076..2504542(+)	partial			WP_005090204.1	hypothetical protein	65.0	59.1	39.6
MGA_5361	LOCUS_53530	sequence5:2505542..2506153(+)	partial			WP_010950329.1	DUF5631 domain-containing protein	88.7	44.7	49.4
MGA_5362	LOCUS_53540	sequence5:2506173..2506859(-)	partial			WP_009935676.1	IS110-like element IS1547 family transposase	83.8	52.7	57.8
MGA_5363	LOCUS_53550	sequence5:2506911..2507531(-)	partial			WP_164929392.1	IS3-like element ISGvi5 family transposase	70.4	36.4	53.7
MGA_5364	LOCUS_53560	sequence5:2507489..2508772(-)	frameshift		2508795	WP_000561483.1	group II intron reverse transcriptase/maturase	89.9	82.5	37.0
MGA_5365	LOCUS_53570	sequence5:2509466..2509867(-)	frameshift		2509965	WP_211285741.1	IS3 family transposase	82.0	28.9	34.5
MGA_5366	LOCUS_53580	sequence5:2509936..2510223(-)	frameshift		2509953	WP_076611786.1	IS3-like element ISMsm7 family transposase	94.7	24.4	35.1
MGA_5367	LOCUS_53590	sequence5:2510454..2510624(+)	partial			WP_003402198.1	superoxide dismutase family protein	91.1	31.7	48.7
MGA_5370	LOCUS_53620	sequence5:2513087..2513488(-)	partial			WP_003891979.1	DUF5994 family protein	88.0	71.4	42.4
MGA_5392	LOCUS_53840	sequence5:2537694..2540210(-)	partial			WP_003408545.1	ATP transporter ATP-binding protein/permease	63.1	61.4	44.5
MGA_5430	LOCUS_54220	sequence5:2591388..2592344(+)	partial			WP_010966839.1	enoyl-[acyl-carrier-protein] reductase FabK	70.8	75.5	37.8
MGA_5433	LOCUS_54250	sequence5:2595151..2596017(+)	partial			WP_003899282.1	TPM domain-containing protein	65.6	29.1	37.0
MGA_5437	LOCUS_54290	sequence5:2598220..2599602(-)	partial			WP_003400514.1	glycosyltransferase family 87 protein	82.6	70.2	27.6
MGA_5439	LOCUS_54310	sequence5:2599899..2600363(+)	partial			WP_012804238.1	nucleoside/nucleotide kinase family protein	91.6	66.5	41.3
MGA_5442	LOCUS_54340	sequence5:2602734..2604422(-)	partial			WP_010967670.1	nitric oxide reductase activation protein NorD	50.2	44.8	35.2
MGA_5449	LOCUS_54410	sequence5:2611407..2611796(+)	frameshift		2611769	WP_003412264.1	Low molecular weight antigen MTB12	93.8	69.6	42.1
MGA_5457	LOCUS_54490	sequence5:2618137..2620710(+)	partial			WP_013227688.1	SpoIIE family protein phosphatase	58.5	36.2	48.6
MGA_5461	LOCUS_54530	sequence5:2623646..2625412(-)	partial			WP_011144393.1	potassium channel protein	86.6	73.6	25.3
MGA_5462	LOCUS_54540	sequence5:2625910..2626218(+)	internal_stop_codon	2626216..2626218(+)		WP_002379167.1	APC family permease	81.4	13.5	39.8
MGA_5463	LOCUS_54550	sequence5:2626240..2627856(+)	internal_stop_codon	2626216..2626218(+)		WP_189742800.1	APC family permease	98.7	82.6	49.8
MGA_5469	LOCUS_54610	sequence5:2635738..2636019(-)	frameshift,internal_stop_codon	2635967..2635969(-)	2635945,2636210	WP_085976939.1	IS3 family transposase	36.6	8.8	73.5
MGA_5470	LOCUS_54620	sequence5:2636482..2636661(-)	frameshift		2636904,2636660	WP_011727958.1	IS21-like element helper ATPase IstB	67.8	14.1	92.5
MGA_5471	LOCUS_54630	sequence5:2637434..2637853(-)	frameshift		2637938,2638134,2637463	WP_011727957.1	DDE-type integrase/transposase/recombinase	92.8	28.5	79.8
MGA_5472	LOCUS_54640	sequence5:2637900..2638133(-)	frameshift		2638134,2637938,2638366	WP_011727957.1	DDE-type integrase/transposase/recombinase	84.4	14.3	89.2
MGA_5473	LOCUS_54650	sequence5:2638244..2638588(-)	frameshift,internal_stop_codon	2638594..2638596(-)	2638133,2638365,2638599	WP_011727957.1	DDE-type integrase/transposase/recombinase	63.2	15.9	84.7
MGA_5474	LOCUS_54660	sequence5:2638525..2638722(-)	frameshift,internal_stop_codon	2638594..2638596(-)	2638365,2638599	WP_011727957.1	DDE-type integrase/transposase/recombinase	76.9	11.5	69.2
MGA_5475	LOCUS_54670	sequence5:2638758..2639087(-)	partial			WP_225580817.1	IS3 family transposase	69.7	19.7	82.9
MGA_5477	LOCUS_54690	sequence5:2639738..2640871(-)	frameshift		2639818	WP_010967989.1	group II intron reverse transcriptase/maturase	86.7	69.7	40.8
MGA_5479	LOCUS_54710	sequence5:2642311..2643192(-)	frameshift		2643212	WP_014207999.1	NAD(P)-dependent alcohol dehydrogenase	100.0	84.8	39.9
MGA_5486	LOCUS_54780	sequence5:2647277..2647822(-)	frameshift		2647839	WP_005093506.1	Nramp family divalent metal transporter	98.3	30.9	60.7
MGA_5487	LOCUS_54790	sequence5:2647813..2648397(-)	frameshift		2647834,2648515,2648437,2648392,2648506,2648651,2648350	WP_005093506.1	Nramp family divalent metal transporter	88.1	30.6	69.3
MGA_5488	LOCUS_54800	sequence5:2648784..2649089(-)	frameshift		2649087	WP_003408840.1	effector	67.3	72.3	83.8
MGA_5489	LOCUS_54810	sequence5:2649209..2649430(-)	partial			WP_003900502.1	type VII secretion system ESX-5 protein EsxJ	98.6	73.5	76.4
MGA_5494	LOCUS_54860	sequence5:2652250..2652510(-)	frameshift		2652288,2652532,2652566,2652669,2652207	WP_125007056.1	IS256 family transposase	86.0	22.9	35.1
MGA_5499	LOCUS_54910	sequence5:2657605..2658909(-)	partial			WP_191850187.1	PP2C family protein-serine/threonine phosphatase	66.1	54.6	38.1
MGA_5506	LOCUS_54980	sequence5:2663863..2664555(+)	partial			WP_011730054.1	SDR family oxidoreductase	84.8	71.3	32.3
MGA_5521	LOCUS_55130	sequence5:2678324..2679184(+)	partial			WP_003899254.1	hypothetical protein	66.1	85.0	61.2
MGA_5525	LOCUS_55170	sequence5:2681400..2681948(+)	partial			WP_013229251.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	74.7	64.8	34.7
MGA_5530	LOCUS_55220	sequence5:2687053..2688129(-)	partial			WP_013227909.1	DUF5685 family protein	91.3	72.3	50.3
MGA_5532	LOCUS_55240	sequence5:2688710..2689231(-)	partial			WP_003407737.1	SDR family oxidoreductase	77.5	47.2	46.3
MGA_5538	LOCUS_55300	sequence5:2693660..2695540(-)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	44.2	45.7	58.8
MGA_5540	LOCUS_55320	sequence5:2696604..2698127(-)	partial			WP_013230569.1	serine/threonine-protein kinase	61.3	54.5	53.7
MGA_5553	LOCUS_55450	sequence5:2708335..2708841(-)	partial			WP_223495338.1	hypothetical protein	28.6	70.0	59.2
MGA_5557	LOCUS_55490	sequence5:2711721..2712557(+)	partial			WP_003901363.1	apolipoprotein N-acyltransferase	96.0	53.2	71.2
MGA_5598	LOCUS_55900	sequence5:2748152..2749657(+)	partial			WP_002399999.1	phage terminase large subunit	45.9	47.9	39.0
MGA_5608	LOCUS_56000	sequence5:2756497..2757216(-)	frameshift		2757210,2757279	WP_003411507.1	HAD family hydrolase	95.4	76.6	68.0
MGA_5632	LOCUS_56240	sequence5:2785315..2787156(-)	partial			WP_011729702.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	55.1	56.9	80.8
MGA_5652	LOCUS_56440	sequence5:2807174..2808136(+)	partial			WP_003411405.1	MmpS family transport accessory protein	30.0	32.8	88.8
MGA_5701	LOCUS_56930	sequence5:2858626..2859231(-)	partial			WP_003411129.1	phosphoribosyltransferase family protein	99.0	56.5	75.4
MGA_5719	LOCUS_57100	sequence5:2878337..2878636(+)	partial			WP_003411107.1	hypothetical protein	96.0	70.8	80.4
MGA_5757	LOCUS_57480	sequence5:2916469..2917602(-)	frameshift		2917657	WP_010950655.1	DUF5631 domain-containing protein	98.1	54.8	38.7
MGA_5765	LOCUS_57560	sequence5:2925799..2926113(-)	frameshift		2926112	WP_011731392.1	IS481-like element ISMsm9 family transposase	98.1	30.6	57.8
MGA_5766	LOCUS_57570	sequence5:2926110..2926838(-)	frameshift		2926112	WP_011027058.1	IS481-like element IS1649 family transposase	93.4	67.3	51.8
MGA_5767	LOCUS_57580	sequence5:2927307..2928302(-)	frameshift		2927411	WP_011970928.1	IS110 family transposase	86.1	78.2	42.3
MGA_5769	LOCUS_57600	sequence5:2929870..2931315(+)	frameshift,internal_stop_codon	2931013..2931015(+)	2931006	WP_010886073.1	PPE family protein	37.4	34.0	60.4
MGA_5770	LOCUS_57610	sequence5:2931389..2932603(-)	frameshift		2932613	WP_003410659.1	precorrin-2 C(20)-methyltransferase	99.5	79.9	83.0
MGA_5772	LOCUS_57630	sequence5:2933481..2934389(-)	frameshift		2934415	WP_003900454.1	precorrin-3B synthase	99.0	82.4	72.2
MGA_5773	LOCUS_57640	sequence5:2934410..2934568(-)	frameshift		2934415	WP_003900454.1	precorrin-3B synthase	96.2	13.8	72.0
MGA_5775	LOCUS_57660	sequence5:2935322..2936005(+)	frameshift,internal_stop_codon	2935994..2935996(+)	2935696,2935945,2935909,2935981	WP_005113127.1	NAD(P)/FAD-dependent oxidoreductase	55.1	25.9	53.5
MGA_5776	LOCUS_57670	sequence5:2936002..2936505(+)	frameshift		2935944,2935995,2936475,2935902,2936571	WP_003404651.1	NAD(P)/FAD-dependent oxidoreductase	94.6	31.5	51.9
MGA_5777	LOCUS_57680	sequence5:2936566..2936775(+)	frameshift		2936472,2936568	WP_003404651.1	NAD(P)/FAD-dependent oxidoreductase	89.9	12.5	50.0
MGA_5778	LOCUS_57690	sequence5:2936843..2937292(+)	frameshift		2937082,2937284,2937103	WP_003895300.1	ABC transporter permease	95.3	55.1	74.5
MGA_5779	LOCUS_57700	sequence5:2937283..2937633(+)	frameshift		2937082,2937284,2937103	WP_003895300.1	ABC transporter permease	99.1	43.7	88.7
MGA_5780	LOCUS_57710	sequence5:2937717..2938154(+)	frameshift		2938169,2938091,2938341	WP_011729372.1	ABC transporter ATP-binding protein	84.8	50.2	84.6
