# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:116..556(+)	frameshift		128,428	WP_011729980.1	molybdenum cofactor guanylyltransferase	67.1	52.4	75.5
MGA_6	LOCUS_00060	sequence1:4527..5102(+)	frameshift		5099,5060,4925,4943	WP_011729974.1	S9 family peptidase	94.2	27.3	58.0
MGA_7	LOCUS_00070	sequence1:5123..6499(+)	frameshift		4946,5060,6086,6182,5099,4925	WP_011729974.1	S9 family peptidase	100.0	70.1	72.8
MGA_8	LOCUS_00080	sequence1:6510..6692(+)	frameshift		6806,6671	WP_003896009.1	trans-acting enoyl reductase family protein	90.0	13.0	81.5
MGA_9	LOCUS_00090	sequence1:6795..7673(+)	frameshift		7584,6806,6671	WP_003896009.1	trans-acting enoyl reductase family protein	89.4	62.7	81.2
MGA_11	LOCUS_00110	sequence1:8584..8913(+)	frameshift		9168,8907	WP_003896007.1	valine--tRNA ligase	100.0	12.3	91.7
MGA_12	LOCUS_00120	sequence1:8925..9227(+)	frameshift		9171,8910	WP_003896007.1	valine--tRNA ligase	81.0	9.1	95.1
MGA_13	LOCUS_00130	sequence1:9224..11245(+)	frameshift		9170	WP_003896007.1	valine--tRNA ligase	100.0	75.8	88.7
MGA_14	LOCUS_00140	sequence1:11242..11565(+)	frameshift		11484	WP_003899324.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	72.0	15.8	83.1
MGA_15	LOCUS_00150	sequence1:11514..12647(+)	frameshift		11484	WP_003899324.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	100.0	78.6	69.9
MGA_18	LOCUS_00180	sequence1:13850..15577(+)	frameshift		15535	WP_011729971.1	Rne/Rng family ribonuclease	96.2	56.4	63.0
MGA_19	LOCUS_00190	sequence1:15672..16847(+)	frameshift		15538	WP_011729971.1	Rne/Rng family ribonuclease	72.9	25.9	71.7
MGA_20	LOCUS_00200	sequence1:16884..17465(-)	frameshift		17494	WP_013229302.1	IS4 family transposase	98.4	41.5	56.5
MGA_21	LOCUS_00210	sequence1:17453..17731(-)	frameshift		17736,17493	WP_013229302.1	IS4 family transposase	82.6	16.7	50.6
MGA_22	LOCUS_00220	sequence1:17716..18108(-)	frameshift		17736,17493	WP_013229317.1	IS4 family transposase	80.0	25.2	49.1
MGA_26	LOCUS_00260	sequence1:20655..21434(+)	frameshift		21314	WP_011729969.1	glutamate 5-kinase	80.3	56.2	92.3
MGA_27	LOCUS_00270	sequence1:21368..21790(+)	frameshift		21314	WP_011729969.1	glutamate 5-kinase	85.7	32.4	83.3
MGA_74	LOCUS_00740	sequence1:68873..70678(+)	frameshift		70645	WP_013225226.1	type I polyketide synthase	95.7	26.7	47.9
MGA_75	LOCUS_00750	sequence1:70770..74105(+)	frameshift		70494,70663	WP_010886158.1	phthiocerol type I polyketide synthase PpsA	99.1	59.2	29.5
MGA_78	LOCUS_00780	sequence1:79425..80156(+)	partial			WP_011729889.1	phenyloxazoline synthase MbtB	86.8	18.6	45.0
MGA_131	LOCUS_01310	sequence1:141756..142136(-)	partial			WP_003895802.1	phage holin family protein	70.6	74.8	79.8
MGA_135	LOCUS_01350	sequence1:145351..145677(-)	partial			WP_013224003.1	hypothetical protein	76.9	70.3	33.7
MGA_146	LOCUS_01460	sequence1:156233..157054(+)	frameshift		156182	WP_085976170.1	IS3 family transposase	100.0	70.7	89.0
MGA_148	LOCUS_01480	sequence1:159241..159912(+)	partial			WP_003899505.1	translation initiation factor IF-2	33.2	8.2	58.1
MGA_155	LOCUS_01550	sequence1:168854..170146(+)	partial			WP_010974284.1	hypothetical protein	79.3	69.8	31.4
MGA_157	LOCUS_01570	sequence1:170953..171411(-)	partial			WP_013230027.1	hypothetical protein	57.9	73.9	50.0
MGA_159	LOCUS_01590	sequence1:171620..172318(+)	frameshift		171498,171579,172149	WP_085976166.1	IS3 family transposase	73.3	45.1	43.5
MGA_185	LOCUS_01850	sequence1:202281..202706(+)	partial			WP_087078053.1	arsenate reductase ArsC	95.7	60.8	90.4
MGA_193	LOCUS_01930	sequence1:208625..209743(+)	partial			WP_010950755.1	ACR3 family arsenite efflux transporter	96.0	71.7	89.4
MGA_199	LOCUS_01990	sequence1:214293..214994(+)	partial			WP_003406372.1	adenylate cyclase	54.9	32.2	39.8
MGA_200	LOCUS_02000	sequence1:214991..215479(+)	partial			WP_118838972.1	methyltransferase domain-containing protein	69.1	43.1	33.6
MGA_202	LOCUS_02020	sequence1:215838..216764(+)	frameshift		215808,216196,216168	WP_125967589.1	IS3 family transposase	92.9	70.7	50.7
MGA_203	LOCUS_02030	sequence1:217042..217377(-)	partial			WP_012256454.1	thermonuclease family protein	69.4	42.0	48.1
MGA_207	LOCUS_02070	sequence1:220360..220602(-)	partial			WP_011729752.1	lipopolysaccharide assembly protein LapA domain-containing protein	63.8	67.1	56.9
MGA_211	LOCUS_02110	sequence1:223006..224133(+)	partial			WP_011729746.1	LuxR C-terminal-related transcriptional regulator	64.3	43.6	34.7
MGA_219	LOCUS_02190	sequence1:231625..232659(+)	partial			WP_005112872.1	alpha/beta hydrolase fold domain-containing protein	65.4	65.7	38.9
MGA_272	LOCUS_02720	sequence1:284932..286674(-)	partial			WP_011729702.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	55.2	55.2	84.5
MGA_275	LOCUS_02750	sequence1:289052..290002(-)	partial			WP_062284982.1	peptidoglycan DD-metalloendopeptidase family protein	29.7	29.3	46.0
MGA_291	LOCUS_02910	sequence1:305824..306693(+)	partial			WP_011729687.1	MmpS family transport accessory protein	48.4	47.5	65.5
MGA_319	LOCUS_03190	sequence1:334020..334490(+)	partial			WP_011729665.1	DUF3040 domain-containing protein	65.4	76.7	68.6
MGA_322	LOCUS_03220	sequence1:336483..337646(+)	frameshift,internal_stop_codon	337720..337722(+)	337616	WP_011729662.1	hypothetical protein	67.7	69.5	57.8
MGA_403	LOCUS_04030	sequence1:422720..423514(+)	partial			WP_003895335.1	DUF4333 domain-containing protein	49.6	47.3	67.2
MGA_428	LOCUS_04280	sequence1:447689..448201(-)	partial			WP_011729369.1	hypothetical protein	100.0	73.4	70.0
MGA_471	LOCUS_04710	sequence1:495823..496254(+)	partial			WP_011729330.1	translation initiation factor IF-3	94.4	65.5	91.1
MGA_481	LOCUS_04810	sequence1:505250..506233(-)	partial			WP_167469674.1	NYN domain-containing protein	62.7	65.4	36.4
MGA_492	LOCUS_04920	sequence1:519907..520452(+)	partial			WP_003895209.1	hypothetical protein	71.8	73.6	51.1
MGA_499	LOCUS_04990	sequence1:530979..531575(+)	partial			WP_223495647.1	tetratricopeptide repeat protein	100.0	70.5	76.8
MGA_526	LOCUS_05260	sequence1:560112..561425(-)	partial			WP_004554539.1	restriction endonuclease subunit S	48.7	49.4	50.7
MGA_534	LOCUS_05340	sequence1:570991..571326(+)	frameshift		571263,571055	WP_003887884.1	IS3 family transposase	64.0	22.4	100.0
MGA_535	LOCUS_05350	sequence1:571323..571529(+)	frameshift		571263,571055	WP_085976171.1	IS3 family transposase	100.0	16.7	98.5
MGA_537	LOCUS_05370	sequence1:572460..573953(-)	partial			WP_011729255.1	serine/threonine-protein kinase	61.8	61.5	63.5
MGA_541	LOCUS_05410	sequence1:577460..578485(-)	frameshift,internal_stop_codon	577280..577282(-)	577249,577462	WP_013229302.1	IS4 family transposase	93.5	67.8	34.9
MGA_550	LOCUS_05500	sequence1:584753..585484(+)	frameshift		585328	WP_013225339.1	FAD-dependent oxidoreductase	85.6	44.7	38.5
MGA_551	LOCUS_05510	sequence1:585376..586116(+)	frameshift		585331	WP_013225339.1	FAD-dependent oxidoreductase	93.1	50.7	39.1
MGA_554	LOCUS_05540	sequence1:588406..590409(+)	partial			WP_003402100.1	serine/threonine protein kinase PknG	59.5	51.5	56.1
MGA_563	LOCUS_05630	sequence1:598700..598975(+)	frameshift		598592,598679	WP_011728664.1	SDR family NAD(P)-dependent oxidoreductase	98.9	51.1	45.2
MGA_564	LOCUS_05640	sequence1:599066..599308(+)	frameshift		599118	WP_011728669.1	nuclear transport factor 2 family protein	73.8	31.6	72.9
MGA_610	LOCUS_06100	sequence1:646292..647182(-)	frameshift		646300,646236	WP_011729223.1	hypothetical protein	96.6	84.2	69.1
MGA_631	LOCUS_06310	sequence1:665624..666628(+)	partial			WP_011729208.1	alanine and proline-rich secreted protein Apa	66.5	66.3	70.2
MGA_650	LOCUS_06500	sequence1:686175..687227(-)	partial			WP_009936020.1	HNH endonuclease signature motif containing protein	95.7	70.5	60.6
MGA_651	LOCUS_06510	sequence1:687501..687905(-)	frameshift		687846	WP_012804104.1	integrase core domain-containing protein	87.3	30.2	35.9
MGA_652	LOCUS_06520	sequence1:687799..688260(-)	frameshift		688480,687844,688429	WP_012804104.1	integrase core domain-containing protein	89.5	31.6	69.3
MGA_653	LOCUS_06530	sequence1:688391..688753(-)	frameshift		688480,688429	WP_012804104.1	integrase core domain-containing protein	78.3	21.7	68.1
MGA_664	LOCUS_06640	sequence1:700787..701158(-)	partial			WP_011729167.1	FUSC family protein	96.7	17.7	68.1
MGA_674	LOCUS_06740	sequence1:709746..709880(+)	partial			WP_011729157.1	dienelactone hydrolase family protein	100.0	14.1	79.5
MGA_696	LOCUS_06960	sequence1:725643..726119(+)	partial			WP_011730721.1	transglycosylase family protein	39.2	12.6	53.2
MGA_697	LOCUS_06970	sequence1:726200..726595(-)	frameshift		726746,726319	WP_085976166.1	IS3 family transposase	61.8	21.5	50.0
MGA_713	LOCUS_07130	sequence1:741834..742298(-)	frameshift		741884	WP_011729111.1	hypothetical protein	98.7	74.0	75.7
MGA_746	LOCUS_07460	sequence1:771527..771763(-)	partial			WP_029104535.1	hypothetical protein	51.3	50.0	85.0
MGA_758	LOCUS_07580	sequence1:781300..781773(+)	partial			WP_003409420.1	resuscitation-promoting factor RpfC	52.9	47.2	68.7
MGA_759	LOCUS_07590	sequence1:781878..782588(+)	partial			WP_010969623.1	alpha/beta hydrolase	86.9	71.1	34.4
MGA_779	LOCUS_07790	sequence1:795660..796484(+)	frameshift,internal_stop_codon	796122..796124(+)	796064,796136	WP_003113090.1	TauD/TfdA family dioxygenase	92.7	81.0	27.5
MGA_783	LOCUS_07830	sequence1:800810..801295(+)	frameshift		801247	WP_014207959.1	alpha/beta fold hydrolase	77.0	32.9	44.8
MGA_784	LOCUS_07840	sequence1:801292..801978(+)	frameshift		801247	WP_014207959.1	alpha/beta fold hydrolase	99.1	59.7	29.5
MGA_799	LOCUS_07990	sequence1:809725..811242(-)	partial			WP_047902700.1	IS21 family transposase	47.5	71.3	28.7
MGA_801	LOCUS_08010	sequence1:812606..813202(-)	partial			WP_010870259.1	DUF2202 domain-containing protein	70.2	75.1	43.9
MGA_808	LOCUS_08080	sequence1:817396..818130(+)	partial			WP_007324646.1	ZIP family metal transporter	75.4	73.5	24.0
MGA_809	LOCUS_08090	sequence1:818138..818707(-)	partial			WP_005056874.1	TetR/AcrR family transcriptional regulator	33.9	32.3	42.2
MGA_813	LOCUS_08130	sequence1:822958..824067(-)	partial			WP_011964234.1	site-specific integrase	42.8	40.6	30.4
MGA_832	LOCUS_08320	sequence1:847322..848656(-)	partial			WP_003974635.1	recombinase family protein	84.9	71.0	27.6
MGA_834	LOCUS_08340	sequence1:848978..849730(-)	frameshift		849776,849836	WP_085976166.1	IS3 family transposase	96.0	62.7	43.3
MGA_836	LOCUS_08360	sequence1:850284..851228(+)	partial			WP_010889379.1	class I SAM-dependent DNA methyltransferase	88.2	39.6	34.9
MGA_841	LOCUS_08410	sequence1:861136..862962(+)	partial			WP_010974287.1	ATP-dependent endonuclease	72.2	71.2	23.1
MGA_842	LOCUS_08420	sequence1:862962..864803(+)	partial			WP_011013929.1	DNA helicase PcrA	62.0	50.9	26.9
MGA_843	LOCUS_08430	sequence1:865549..865869(+)	frameshift		865845	WP_014206889.1	NAD(P)-dependent alcohol dehydrogenase	88.7	25.3	38.3
MGA_844	LOCUS_08440	sequence1:865866..866045(+)	frameshift		865845	WP_010920254.1	NAD(P)-dependent alcohol dehydrogenase	93.2	15.0	56.4
MGA_845	LOCUS_08450	sequence1:866098..867906(+)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	56.6	56.8	55.5
MGA_865	LOCUS_08650	sequence1:885036..886058(+)	partial			WP_011727642.1	hypothetical protein	70.3	74.0	26.8
MGA_912	LOCUS_09120	sequence1:933584..934135(+)	partial			WP_220096343.1	DUF4190 domain-containing protein	77.6	55.6	55.9
MGA_918	LOCUS_09180	sequence1:943050..943445(-)	partial			WP_029104321.1	TM2 domain-containing protein	74.0	75.2	76.3
MGA_919	LOCUS_09190	sequence1:943473..945830(-)	partial			WP_011728906.1	prolipoprotein diacylglyceryl transferase	38.7	50.0	75.3
MGA_946	LOCUS_09460	sequence1:969886..970692(-)	partial			WP_011728888.1	DUF2567 domain-containing protein	70.9	84.4	56.3
MGA_995	LOCUS_09950	sequence1:1033950..1034426(+)	partial			WP_086672051.1	nitroreductase family deazaflavin-dependent oxidoreductase	67.1	80.0	36.8
MGA_1094	LOCUS_10940	sequence1:1137739..1138698(-)	frameshift		1137771	WP_012804104.1	integrase core domain-containing protein	100.0	73.3	70.2
MGA_1111	LOCUS_11110	sequence1:1155581..1155808(-)	partial			WP_003894402.1	replication-associated recombination protein A	98.7	16.6	79.7
MGA_1116	LOCUS_11160	sequence1:1160538..1161029(-)	frameshift		1161015	WP_003887884.1	IS3 family transposase	96.9	49.8	100.0
MGA_1158	LOCUS_11580	sequence1:1201750..1202229(+)	partial			WP_011730517.1	MPT63 family protein	97.5	45.1	51.2
MGA_1163	LOCUS_11630	sequence1:1208102..1209961(-)	partial			WP_011728723.1	protein translocase subunit SecD	68.2	67.1	76.2
MGA_1178	LOCUS_11780	sequence1:1223853..1224125(-)	partial			WP_005070367.1	hypothetical protein	83.3	71.4	52.0
MGA_1205	LOCUS_12050	sequence1:1248582..1250291(-)	partial			WP_011729255.1	serine/threonine-protein kinase	46.6	55.6	55.6
MGA_1209	LOCUS_12090	sequence1:1253882..1254118(+)	internal_stop_codon	1254116..1254118(+)		WP_010886073.1	PPE family protein	85.9	12.3	57.4
MGA_1319	LOCUS_13190	sequence1:1355716..1356489(-)	frameshift		1356514,1356703	WP_085976171.1	IS3 family transposase	100.0	63.5	98.8
MGA_1339	LOCUS_13390	sequence1:1369866..1371716(-)	partial			WP_005092955.1	hypothetical protein	36.0	28.1	30.2
MGA_1353	LOCUS_13530	sequence1:1382960..1383478(-)	partial			WP_003899112.1	CAP domain-containing protein	83.7	65.2	70.1
MGA_1388	LOCUS_13880	sequence1:1416209..1419019(-)	partial			WP_014877447.1	translation initiation factor IF-2	66.7	66.8	94.1
MGA_1427	LOCUS_14270	sequence1:1462296..1462520(-)	frameshift		1462548	WP_005081941.1	RNA polymerase sigma factor SigI	85.1	22.3	72.3
MGA_1447	LOCUS_14470	sequence1:1480274..1481314(+)	frameshift		1480290	WP_013229302.1	IS4 family transposase	97.7	76.1	49.9
MGA_1450	LOCUS_14500	sequence1:1482287..1482571(-)	partial			WP_068365407.1	DEAD/DEAH box helicase	89.4	11.8	49.4
MGA_1494	LOCUS_14940	sequence1:1524321..1524662(-)	partial			WP_005056472.1	MerR family transcriptional regulator	69.0	84.8	60.3
MGA_1496	LOCUS_14960	sequence1:1525920..1526309(+)	partial			WP_010968903.1	DnaJ C-terminal domain-containing protein	59.7	21.4	45.5
MGA_1525	LOCUS_15250	sequence1:1554165..1554638(-)	partial			WP_011728340.1	30S ribosomal protein S16	73.9	74.4	94.0
MGA_1534	LOCUS_15340	sequence1:1564440..1565906(-)	partial			WP_011728334.1	signal recognition particle-docking protein FtsY	63.9	63.5	84.9
MGA_1535	LOCUS_15350	sequence1:1566178..1567719(+)	partial			WP_003413473.1	PE-PPE domain-containing protein	59.6	51.7	43.4
MGA_1539	LOCUS_15390	sequence1:1572266..1573063(+)	partial			WP_011728331.1	hypothetical protein	61.1	58.9	35.5
MGA_1567	LOCUS_15670	sequence1:1600521..1601174(-)	partial			WP_003893755.1	HU family DNA-binding protein	52.1	54.3	93.8
MGA_1602	LOCUS_16020	sequence1:1638145..1638966(+)	partial			WP_003403885.1	NDMA-dependent alcohol dehydrogenase	99.3	72.0	42.1
MGA_1605	LOCUS_16050	sequence1:1642261..1642542(-)	partial			WP_011728289.1	nitroreductase	93.5	39.5	56.3
MGA_1633	LOCUS_16330	sequence1:1668179..1668715(+)	partial			WP_011727441.1	hypothetical protein	71.9	72.4	43.0
MGA_1634	LOCUS_16340	sequence1:1668740..1670809(-)	partial			WP_011071738.1	NAD(P)-binding protein	97.4	67.9	35.3
MGA_1699	LOCUS_16990	sequence1:1741592..1742599(-)	partial			WP_006311526.1	4-hydroxy-tetrahydrodipicolinate synthase	49.6	54.8	26.3
MGA_1703	LOCUS_17030	sequence1:1745409..1746401(+)	partial			WP_005098458.1	alpha/beta hydrolase fold domain-containing protein	93.3	45.1	52.3
MGA_1707	LOCUS_17070	sequence1:1749778..1750617(+)	partial			WP_003143427.1	MerR family transcriptional regulator	64.9	76.3	33.0
MGA_1728	LOCUS_17280	sequence1:1770328..1771818(+)	partial			WP_013228957.1	AMP-binding protein	99.2	48.6	38.8
MGA_1755	LOCUS_17550	sequence1:1800402..1801100(+)	frameshift		1801016	WP_004544143.1	FAD-dependent monooxygenase	81.5	35.0	46.9
MGA_1756	LOCUS_17560	sequence1:1801034..1801885(+)	frameshift		1800992,1801005	WP_013223151.1	FAD-dependent monooxygenase	80.9	47.2	38.2
MGA_1783	LOCUS_17830	sequence1:1829996..1830649(+)	partial			WP_174519581.1	TetR family transcriptional regulator	72.4	65.6	31.7
MGA_1790	LOCUS_17900	sequence1:1840009..1842660(+)	partial			WP_011036087.1	S8 family peptidase	40.2	60.0	25.7
MGA_1858	LOCUS_18580	sequence1:1916543..1917154(+)	partial			WP_005088087.1	TetR/AcrR family transcriptional regulator	68.0	60.6	33.3
MGA_1864	LOCUS_18640	sequence1:1923919..1924680(+)	partial			WP_015776328.1	DUF2249 domain-containing protein	32.0	77.1	48.1
MGA_1866	LOCUS_18660	sequence1:1925405..1925683(-)	partial			WP_003899076.1	Fur family transcriptional regulator	94.6	59.2	57.5
MGA_1925	LOCUS_19250	sequence1:1986026..1986418(-)	partial			WP_003893268.1	hypothetical protein	81.5	74.6	73.6
MGA_1945	LOCUS_19450	sequence1:2010704..2011537(+)	partial			WP_013222580.1	27-O-demethylrifamycin SV methyltransferase	75.8	73.9	31.2
MGA_1956	LOCUS_19560	sequence1:2021744..2022385(+)	frameshift		2022346	WP_044233703.1	SDR family oxidoreductase	92.0	71.7	42.9
MGA_1968	LOCUS_19680	sequence1:2032478..2033053(+)	partial			WP_000018935.1	DUF421 domain-containing protein	81.2	53.6	24.5
MGA_1969	LOCUS_19690	sequence1:2033197..2033346(-)	partial			WP_013225867.1	hypothetical protein	77.6	71.7	63.2
MGA_1970	LOCUS_19700	sequence1:2033375..2033596(-)	partial			WP_013226939.1	CsbD family protein	61.6	75.0	57.8
MGA_1989	LOCUS_19890	sequence1:2052587..2053069(-)	frameshift		2053113	WP_005111939.1	PucR family transcriptional regulator	91.9	42.9	59.9
MGA_1990	LOCUS_19900	sequence1:2053063..2053728(-)	frameshift		2053113	WP_005111939.1	PucR family transcriptional regulator	85.5	47.5	36.1
MGA_2009	LOCUS_20090	sequence1:2065736..2066098(-)	partial			WP_003417160.1	anti-sigma B factor RsbW	94.2	73.1	46.5
MGA_2015	LOCUS_20150	sequence1:2069335..2069466(-)	partial			WP_011727887.1	NAD(P)H-dependent oxidoreductase	100.0	21.0	58.1
MGA_2016	LOCUS_20160	sequence1:2069750..2070106(-)	frameshift		2070240	WP_005088224.1	PAS and ANTAR domain-containing protein	96.6	50.4	65.8
MGA_2036	LOCUS_20360	sequence1:2092420..2092863(-)	frameshift,internal_stop_codon	2093109..2093111(-)	2092868	WP_003898701.1	IS5 family transposase	98.6	52.6	65.6
MGA_2049	LOCUS_20490	sequence1:2106232..2106465(+)	frameshift		2106450	WP_003422389.1	IS5 family transposase	89.6	51.9	64.3
MGA_2050	LOCUS_20500	sequence1:2106543..2107091(+)	frameshift,internal_stop_codon	2106401..2106403(+),2106317..2106319(+)	2106445	WP_003898701.1	IS5 family transposase	93.4	61.3	68.7
MGA_2051	LOCUS_20510	sequence1:2107516..2107746(+)	frameshift		2107459,2107708	WP_085095815.1	IS256 family transposase	73.7	13.6	96.4
MGA_2053	LOCUS_20530	sequence1:2107881..2108567(+)	frameshift		2107707	WP_085150668.1	IS256 family transposase	100.0	54.4	89.9
MGA_2055	LOCUS_20550	sequence1:2109496..2109912(-)	partial			WP_003894938.1	DUF732 domain-containing protein	65.2	79.6	65.6
MGA_2059	LOCUS_20590	sequence1:2114331..2114879(-)	internal_stop_codon	2115105..2115107(-),2115021..2115023(-)		WP_003898701.1	IS5 family transposase	93.4	61.3	68.7
MGA_2082	LOCUS_20820	sequence1:2136063..2136635(+)	partial			WP_003905037.1	IS110 family transposase	98.9	33.0	76.1
MGA_2101	LOCUS_21010	sequence1:2153882..2154340(+)	partial			WP_013228942.1	OB-fold domain-containing protein	89.5	23.4	41.9
MGA_2102	LOCUS_21020	sequence1:2154359..2154769(-)	partial			WP_011730957.1	bifunctional MaoC family dehydratase N-terminal/OB-fold nucleic acid binding domain-containing protein	85.3	35.8	38.1
MGA_2105	LOCUS_21050	sequence1:2156376..2157437(-)	partial			WP_011730669.1	cyclohexanecarboxylate-CoA ligase	73.4	49.8	31.8
MGA_2120	LOCUS_21200	sequence1:2172857..2173282(+)	partial			WP_010929743.1	Zn-ribbon domain-containing OB-fold protein	77.3	74.5	43.1
MGA_2139	LOCUS_21390	sequence1:2193901..2194923(-)	partial			WP_011730994.1	acyl-CoA dehydrogenase	78.5	38.0	30.5
MGA_2147	LOCUS_21470	sequence1:2200837..2201520(+)	frameshift		2201406	WP_033448208.1	aromatic ring-hydroxylating dioxygenase subunit alpha	82.8	42.8	45.2
MGA_2148	LOCUS_21480	sequence1:2201429..2202127(+)	frameshift		2201406	WP_010930733.1	aromatic ring-hydroxylating dioxygenase subunit alpha	96.6	53.3	37.1
MGA_2157	LOCUS_21570	sequence1:2209437..2210006(+)	partial			WP_013225832.1	alpha/beta hydrolase	94.2	71.0	29.9
MGA_2167	LOCUS_21670	sequence1:2218939..2219238(-)	partial			WP_003899111.1	DUF732 domain-containing protein	87.9	69.6	69.0
MGA_2168	LOCUS_21680	sequence1:2219341..2219838(+)	partial			WP_003899112.1	CAP domain-containing protein	94.5	71.0	59.9
MGA_2170	LOCUS_21700	sequence1:2221406..2222611(-)	partial			WP_011730106.1	OB-fold domain-containing protein	98.0	69.3	47.9
MGA_2176	LOCUS_21760	sequence1:2226931..2227533(-)	partial			WP_010968400.1	TetR family transcriptional regulator	49.0	49.2	36.7
MGA_2187	LOCUS_21870	sequence1:2238737..2239927(+)	partial			WP_004525242.1	acetyl-CoA hydrolase/transferase C-terminal domain-containing protein	67.9	63.9	30.4
MGA_2201	LOCUS_22010	sequence1:2251332..2252312(+)	partial			WP_003419352.1	acyl-CoA dehydrogenase family protein	74.5	70.8	29.6
MGA_2216	LOCUS_22160	sequence1:2266252..2266632(-)	partial			WP_003900829.1	fatty-acid--CoA ligase FadD4	68.3	15.5	67.4
MGA_2288	LOCUS_22880	sequence1:2345318..2346493(-)	partial			WP_003893005.1	anti-sigma-D factor RsdA	53.2	51.9	73.1
MGA_2289	LOCUS_22890	sequence1:2346486..2346884(-)	partial			WP_011727765.1	sigma-70 family RNA polymerase sigma factor	100.0	68.8	85.6
MGA_2291	LOCUS_22910	sequence1:2348476..2348679(+)	partial			WP_003893002.1	WhiB family transcriptional regulator	100.0	69.8	91.0
MGA_2292	LOCUS_22920	sequence1:2348754..2349116(-)	partial			WP_011029650.1	DoxX family protein	77.5	68.4	52.7
MGA_2298	LOCUS_22980	sequence1:2352456..2352698(-)	partial			WP_013222692.1	zinc-dependent alcohol dehydrogenase family protein	71.2	16.9	65.5
MGA_2300	LOCUS_23000	sequence1:2354311..2355912(-)	partial			WP_208267418.1	adenylate/guanylate cyclase domain-containing protein	62.9	61.5	33.3
MGA_2304	LOCUS_23040	sequence1:2357412..2357876(+)	partial			WP_003416059.1	hydrogenase	70.1	81.2	63.9
MGA_2309	LOCUS_23090	sequence1:2360906..2363977(+)	partial			WP_121523862.1	DUF87 domain-containing protein	53.2	51.7	37.8
MGA_2350	LOCUS_23500	sequence1:2407426..2407953(-)	partial			WP_011727719.1	50S ribosomal protein L17	69.7	61.3	91.0
MGA_2411	LOCUS_24110	sequence1:2461196..2461504(-)	frameshift		2461282	WP_011729243.1	FAD-dependent oxidoreductase	72.5	14.9	55.4
MGA_2469	LOCUS_24690	sequence1:2518663..2519100(+)	partial			WP_010971320.1	helix-turn-helix domain-containing protein	65.5	74.4	45.8
MGA_2482	LOCUS_24820	sequence1:2532811..2533533(+)	partial			WP_003892736.1	sigma-70 family RNA polymerase sigma factor	80.0	46.7	81.2
MGA_2483	LOCUS_24830	sequence1:2533420..2534013(-)	frameshift		2534106,2533922	WP_013229302.1	IS4 family transposase	83.2	36.1	59.9
MGA_2485	LOCUS_24850	sequence1:2534978..2535565(+)	partial			WP_003892736.1	sigma-70 family RNA polymerase sigma factor	97.4	46.2	71.6
MGA_2521	LOCUS_25210	sequence1:2571544..2572092(+)	partial			WP_011727553.1	metallophosphoesterase	97.8	53.6	71.9
MGA_2539	LOCUS_25390	sequence1:2588056..2588700(-)	partial			WP_011016479.1	VWA domain-containing protein	77.1	68.9	41.7
MGA_2553	LOCUS_25530	sequence1:2597526..2599283(+)	partial			WP_011727484.1	serine/threonine-protein kinase	57.8	54.6	50.6
MGA_2557	LOCUS_25570	sequence1:2610228..2611889(-)	partial			WP_011102967.1	ATP-dependent helicase	76.1	68.3	30.9
MGA_2561	LOCUS_25610	sequence1:2622171..2625971(-)	partial			WP_010871043.1	ATP-dependent RecD-like DNA helicase	24.2	24.9	29.3
MGA_2567	LOCUS_25670	sequence1:2638172..2639281(+)	partial			WP_011031229.1	DNA cytosine methyltransferase	79.4	66.9	34.7
MGA_2568	LOCUS_25680	sequence1:2639288..2639719(-)	partial			WP_071831429.1	very short patch repair endonuclease	74.1	70.4	43.9
MGA_2569	LOCUS_25690	sequence1:2640186..2645450(+)	partial			WP_011707789.1	ATP-dependent DNA helicase RecQ	22.1	61.2	40.5
MGA_2577	LOCUS_25770	sequence1:2658269..2658568(-)	frameshift		2658603	WP_003977903.1	SDR family NAD(P)-dependent oxidoreductase	76.8	15.2	81.6
MGA_2582	LOCUS_25820	sequence1:2660719..2661162(-)	frameshift,internal_stop_codon	2661408..2661410(-)	2661167	WP_003898701.1	IS5 family transposase	98.6	52.6	65.6
MGA_2595	LOCUS_25950	sequence1:2671792..2672094(+)	partial			WP_011727484.1	serine/threonine-protein kinase	98.0	23.2	33.8
MGA_2596	LOCUS_25960	sequence1:2672186..2673187(-)	partial			WP_013531164.1	alpha/beta hydrolase	71.5	74.0	36.1
MGA_2598	LOCUS_25980	sequence1:2673624..2674595(+)	partial			WP_003412968.1	ERCC4 domain-containing protein	100.0	67.4	59.1
MGA_2619	LOCUS_26190	sequence1:2700550..2701662(-)	partial			WP_011727488.1	hypothetical protein	72.4	70.0	51.6
MGA_2628	LOCUS_26280	sequence1:2711189..2713090(+)	partial			WP_011727482.1	hypothetical protein	65.1	66.6	60.3
MGA_2644	LOCUS_26440	sequence1:2727409..2727729(-)	partial			WP_011727440.1	hypothetical protein	68.9	73.7	68.5
MGA_2658	LOCUS_26580	sequence1:2742607..2744019(+)	partial			WP_005085898.1	MCE family protein	48.1	56.1	27.8
MGA_2661	LOCUS_26610	sequence1:2746120..2747223(+)	partial			WP_003899106.1	virulence factor Mce family protein	76.8	67.8	31.9
MGA_2666	LOCUS_26660	sequence1:2751025..2751723(+)	partial			WP_005084293.1	oxygenase MpaB family protein	67.7	55.1	31.7
MGA_2667	LOCUS_26670	sequence1:2751852..2752517(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	84.2	30.5	30.6
MGA_2706	LOCUS_27060	sequence1:2788982..2789257(-)	partial			WP_011727337.1	hypothetical protein	67.0	75.3	77.0
MGA_2730	LOCUS_27300	sequence1:2808155..2808382(-)	partial			WP_011727316.1	membrane protein	66.7	65.8	64.0
MGA_2784	LOCUS_27840	sequence1:2858156..2858500(+)	partial			WP_013225184.1	LuxR family transcriptional regulator	46.5	6.9	64.2
MGA_2806	LOCUS_28060	sequence1:2879944..2880855(-)	partial			WP_011228982.1	DUF1028 domain-containing protein	66.7	70.4	47.3
MGA_2822	LOCUS_28220	sequence1:2894184..2894705(-)	partial			WP_003899112.1	CAP domain-containing protein	86.7	67.9	70.0
MGA_2831	LOCUS_28310	sequence1:2904711..2906615(+)	partial			WP_093598277.1	membrane dipeptidase	56.2	47.8	29.5
MGA_2847	LOCUS_28470	sequence1:2921776..2922447(-)	partial			WP_005113188.1	hypothetical protein	47.1	33.3	71.4
MGA_2849	LOCUS_28490	sequence1:2924422..2924754(-)	frameshift		2924789	WP_223294627.1	polysaccharide deacetylase family protein	92.7	29.1	47.1
MGA_2850	LOCUS_28500	sequence1:2924730..2925221(-)	frameshift		2924777	WP_039648073.1	polysaccharide deacetylase family protein	62.0	38.2	51.4
MGA_2851	LOCUS_28510	sequence1:2925700..2928975(+)	partial			WP_011727252.1	hypothetical protein	43.4	34.0	21.5
MGA_2855	LOCUS_28550	sequence1:2932454..2934649(+)	partial			WP_005085850.1	DUF1214 domain-containing protein	50.1	82.8	27.9
MGA_2900	LOCUS_29000	sequence1:2975399..2976058(-)	partial			WP_011730075.1	membrane protein	98.2	74.6	35.0
MGA_2914	LOCUS_29140	sequence1:2988014..2988658(-)	partial			WP_011029478.1	TetR family transcriptional regulator	69.2	67.1	33.5
MGA_3029	LOCUS_30290	sequence1:3103754..3104338(+)	partial			WP_011727144.1	hypothetical protein	58.8	68.3	51.8
MGA_3043	LOCUS_30430	sequence1:3116306..3116656(+)	partial			WP_003892129.1	hypothetical protein	99.1	64.2	74.8
MGA_3045	LOCUS_30450	sequence1:3117491..3125782(+)	partial			WP_011031572.1	helix-turn-helix transcriptional regulator	14.5	40.4	33.2
MGA_3048	LOCUS_30480	sequence1:3127256..3127744(+)	frameshift		3127152,3127170,3127164,3127198	WP_003892125.1	hypothetical protein	43.2	45.3	50.0
MGA_3054	LOCUS_30540	sequence1:3140647..3141777(-)	partial			WP_005114726.1	IniB N-terminal domain-containing protein	88.3	44.0	27.7
MGA_3069	LOCUS_30690	sequence1:3160959..3161651(-)	partial			WP_011727488.1	hypothetical protein	44.3	26.6	35.5
MGA_3089	LOCUS_30880	sequence1:3176099..3177469(+)	partial			WP_011029781.1	FxSxx-COOH system tetratricopeptide repeat protein	50.4	23.8	26.4
MGA_3092	LOCUS_30910	sequence1:3180248..3180715(+)	partial			WP_011727155.1	transcriptional regulator	97.4	68.6	34.4
MGA_3109	LOCUS_31080	sequence1:3197797..3199773(-)	partial			WP_011727085.1	Hsp70 family protein	71.9	77.1	72.2
MGA_3149	LOCUS_31480	sequence1:3240344..3240625(+)	partial			WP_003400629.1	hypothetical protein	97.8	70.5	36.3
MGA_3190	LOCUS_31890	sequence1:3280176..3280574(-)	partial			WP_005110063.1	hypothetical protein	34.8	17.8	58.7
MGA_3208	LOCUS_32070	sequence1:3293659..3294519(+)	partial			WP_011727602.1	Ig-like domain-containing protein	95.8	68.1	58.7
MGA_3222	LOCUS_32210	sequence1:3313722..3314036(-)	partial			WP_011730323.1	heme-binding protein	87.5	73.2	54.9
MGA_3223	LOCUS_32220	sequence1:3314075..3314383(-)	partial			WP_005084926.1	hypothetical protein	70.6	60.7	43.1
MGA_3237	LOCUS_32360	sequence1:3328354..3328686(-)	partial			WP_223495265.1	hypothetical protein	93.6	60.8	55.8
MGA_3299	LOCUS_32980	sequence1:3411177..3412862(-)	partial			WP_011086001.1	VWA domain-containing protein	52.4	45.7	33.7
MGA_3334	LOCUS_33330	sequence1:3451713..3454247(+)	frameshift		3454157	WP_011726778.1	MMPL family transporter	97.7	81.6	73.3
MGA_3335	LOCUS_33340	sequence1:3454217..3454714(+)	frameshift		3454157	WP_011726778.1	MMPL family transporter	72.7	12.7	50.4
MGA_3343	LOCUS_33420	sequence1:3461286..3461732(-)	partial			WP_011726772.1	hemophore	84.5	64.8	64.0
MGA_3356	LOCUS_33550	sequence1:3477499..3478953(+)	partial			WP_162177563.1	HTTM domain-containing protein	53.9	68.5	30.2
MGA_3359	LOCUS_33580	sequence1:3481480..3482175(+)	partial			WP_003420620.1	class I SAM-dependent methyltransferase	63.6	47.1	43.0
MGA_3371	LOCUS_33700	sequence1:3493245..3494708(-)	partial			WP_005112218.1	PE-PPE domain-containing protein	77.6	71.7	31.5
MGA_3407	LOCUS_34060	sequence1:3532313..3532693(+)	partial			WP_013228912.1	DoxX family protein	65.1	66.7	51.2
MGA_3444	LOCUS_34430	sequence1:3568443..3569333(+)	partial			WP_011726636.1	type VII secretion system ESX-1 associated protein EspE	68.9	37.7	33.3
MGA_3475	LOCUS_34740	sequence1:3604005..3604796(+)	frameshift		3604712	WP_011726632.1	pirin family protein	89.4	72.9	83.4
MGA_3476	LOCUS_34750	sequence1:3604724..3604972(+)	frameshift		3604712	WP_011726632.1	pirin family protein	100.0	25.5	80.5
MGA_3484	LOCUS_34830	sequence1:3613799..3615622(+)	partial			WP_010950653.1	alpha/beta hydrolase	74.6	68.4	53.6
MGA_3485	LOCUS_34840	sequence1:3615687..3616136(+)	partial			WP_003410707.1	hypothetical protein	94.0	73.3	37.9
MGA_3488	LOCUS_34870	sequence1:3617182..3617460(-)	partial			WP_003404754.1	DUF1778 domain-containing protein	92.4	53.8	78.8
MGA_3489	LOCUS_34880	sequence1:3618192..3619637(+)	partial			WP_014876644.1	DUF3662 domain-containing protein	51.8	48.9	75.9
MGA_3529	LOCUS_35280	sequence1:3662606..3663163(-)	partial			WP_011731632.1	NUDIX hydrolase	100.0	62.0	86.5
MGA_3573	LOCUS_35720	sequence1:3712005..3713012(+)	partial			WP_003896243.1	acyl-CoA dehydrogenase family protein	40.0	48.5	45.5
MGA_3580	LOCUS_35790	sequence1:3719146..3720711(-)	partial			WP_013228957.1	AMP-binding protein	94.4	49.0	38.3
MGA_3597	LOCUS_35960	sequence1:3741851..3742318(+)	partial			WP_012296334.1	OB-fold domain-containing protein	72.3	35.1	39.5
MGA_3603	LOCUS_36020	sequence1:3746796..3747329(-)	partial			WP_031480854.1	TetR family transcriptional regulator	84.7	74.5	28.7
MGA_3609	LOCUS_36080	sequence1:3753696..3754916(+)	partial			WP_005901990.1	acetyl-CoA hydrolase/transferase family protein	46.3	47.0	30.9
MGA_3631	LOCUS_36300	sequence1:3772699..3773520(+)	frameshift		3772648	WP_085976170.1	IS3 family transposase	100.0	70.7	89.0
MGA_3687	LOCUS_36860	sequence1:3831178..3832701(+)	partial			WP_011338147.1	VWA domain-containing protein	54.0	45.2	30.7
MGA_3706	LOCUS_37050	sequence1:3849541..3852039(-)	partial			WP_165691269.1	Ig-like domain-containing protein	24.0	8.6	32.4
MGA_3766	LOCUS_37650	sequence1:3912666..3914153(+)	partial			WP_011731332.1	MFS transporter	93.5	70.1	66.7
MGA_3792	LOCUS_37910	sequence1:3935843..3936187(-)	partial			WP_003899475.1	SRPBCC family protein	99.1	72.4	58.4
MGA_3801	LOCUS_38000	sequence1:3941075..3941527(+)	partial			WP_015777103.1	heavy metal translocating P-type ATPase	74.0	15.9	59.5
MGA_3811	LOCUS_38100	sequence1:3955183..3955800(-)	partial			WP_011027253.1	TetR/AcrR family transcriptional regulator	66.3	63.4	31.9
MGA_3818	LOCUS_38170	sequence1:3961366..3961860(-)	partial			WP_011731281.1	hypothetical protein	47.0	50.6	40.2
MGA_3824	LOCUS_38230	sequence1:3965411..3966514(+)	partial			WP_011731278.1	hypothetical protein	43.3	47.3	36.0
MGA_3828	LOCUS_38270	sequence1:3968520..3968948(+)	frameshift		3968906,3968948	WP_085150668.1	IS256 family transposase	85.9	29.6	88.5
MGA_3829	LOCUS_38280	sequence1:3968875..3969336(+)	frameshift		3969329,3968948,3969509,3968909,3969374	WP_085150668.1	IS256 family transposase	83.0	30.8	92.9
MGA_3830	LOCUS_38290	sequence1:3969568..3969765(+)	frameshift		3969507,3969375,3969327	WP_085150668.1	IS256 family transposase	100.0	14.8	84.6
MGA_3831	LOCUS_38300	sequence1:3969769..3970113(-)	partial			WP_003897840.1	secretion protein EspR	79.8	67.9	97.8
MGA_3840	LOCUS_38390	sequence1:3976136..3977104(-)	partial			WP_235624060.1	LCP family protein	98.4	74.1	77.0
MGA_3899	LOCUS_38980	sequence1:4051497..4052135(-)	partial			WP_013223018.1	TetR/AcrR family transcriptional regulator	61.8	49.2	31.3
MGA_3900	LOCUS_38990	sequence1:4052216..4052944(+)	partial			WP_004530640.1	NAD(P)-binding domain-containing protein	88.8	43.8	45.9
MGA_3918	LOCUS_39170	sequence1:4067302..4067514(-)	partial			WP_011731221.1	hypothetical protein	100.0	49.3	65.7
MGA_3921	LOCUS_39200	sequence1:4068749..4069375(-)	frameshift		4069601,4069427	WP_013229302.1	IS4 family transposase	98.1	44.8	54.6
MGA_3937	LOCUS_39360	sequence1:4083513..4084808(-)	partial			WP_005112218.1	PE-PPE domain-containing protein	80.3	62.4	38.5
MGA_3959	LOCUS_39580	sequence1:4108016..4108354(-)	frameshift		4108377	WP_003405722.1	hypothetical protein	79.5	32.5	58.7
MGA_3960	LOCUS_39590	sequence1:4108354..4108944(-)	frameshift		4108377	WP_003405722.1	hypothetical protein	91.8	63.6	57.2
MGA_3976	LOCUS_39750	sequence1:4124230..4125288(-)	partial			WP_003916796.1	lytic transglycosylase domain-containing protein	76.1	66.9	51.3
MGA_4023	LOCUS_40220	sequence1:4166879..4167976(+)	partial			WP_011731117.1	serine/threonine-protein kinase	70.1	62.9	66.8
MGA_4038	LOCUS_40370	sequence1:4185311..4185874(-)	frameshift		4185861	WP_011731432.1	IS1380-like element ISMsm10 family transposase	96.8	38.8	89.0
MGA_4039	LOCUS_40380	sequence1:4185763..4186707(-)	frameshift		4185861	WP_011729574.1	IS1380-like element ISMsm12 family transposase	90.4	60.8	77.5
MGA_4054	LOCUS_40530	sequence1:4203854..4204612(+)	frameshift		4204403,4203812,4203629	WP_005061070.1	cytochrome P450	73.0	37.9	70.1
MGA_4077	LOCUS_40760	sequence1:4227737..4228195(-)	partial			WP_011030506.1	PaaI family thioesterase	84.2	67.5	41.7
MGA_4080	LOCUS_40790	sequence1:4229605..4230180(-)	frameshift		4230179	WP_085150668.1	IS256 family transposase	100.0	45.4	89.0
MGA_4081	LOCUS_40800	sequence1:4230168..4230854(-)	frameshift		4230179	WP_085150668.1	IS256 family transposase	98.7	54.6	88.9
MGA_4088	LOCUS_40870	sequence1:4237049..4237246(-)	internal_stop_codon	4237274..4237276(-)		WP_003405603.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	90.8	23.5	84.7
MGA_4115	LOCUS_41140	sequence1:4263123..4263383(+)	partial			WP_181825002.1	TadE family type IV pilus minor pilin	84.9	66.7	43.8
MGA_4127	LOCUS_41260	sequence1:4276307..4277902(-)	partial			WP_005092955.1	hypothetical protein	72.5	50.8	23.0
MGA_4128	LOCUS_41270	sequence1:4277939..4278640(-)	partial			WP_011730306.1	EspA/EspE family type VII secretion system effector	93.6	27.5	50.2
MGA_4196	LOCUS_41950	sequence1:4344000..4344290(+)	partial			WP_003897466.1	30S ribosomal protein S18	74.0	83.5	84.5
MGA_4222	LOCUS_42210	sequence1:4367372..4367728(-)	partial			WP_010957434.1	CBU_0201 family Dot/Icm type IV secretion system effector	57.6	52.7	46.4
MGA_4256	LOCUS_42550	sequence1:4400713..4402119(-)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	65.6	49.5	37.6
MGA_4277	LOCUS_42760	sequence1:4423019..4445806(+)	frameshift,internal_stop_codon	4445804..4445806(+),4445786..4445788(+)	4445794,4445827,4445770,4445803,4445791	WP_005112588.1	non-ribosomal peptide synthetase	39.8	37.0	51.4
MGA_4278	LOCUS_42770	sequence1:4445803..4457217(+)	frameshift,internal_stop_codon	4445804..4445806(+)	4445818,4445791	WP_013226861.1	non-ribosomal peptide synthetase	81.2	49.5	42.7
MGA_4312	LOCUS_43110	sequence1:4499546..4500751(+)	frameshift,internal_stop_codon	4500749..4500751(+)	4500781	WP_013229317.1	IS4 family transposase	94.8	81.3	35.6
MGA_4343	LOCUS_43420	sequence1:4529372..4530169(-)	partial			WP_011228679.1	enoyl-CoA hydratase-related protein	72.5	67.5	41.1
MGA_4367	LOCUS_43660	sequence1:4550288..4551496(-)	partial			WP_011730306.1	EspA/EspE family type VII secretion system effector	90.5	46.5	32.8
MGA_4391	LOCUS_43900	sequence1:4573855..4574490(+)	frameshift,internal_stop_codon	4573776..4573778(+)	4573838	WP_010886087.1	hypothetical protein	94.8	63.6	46.6
MGA_4440	LOCUS_44390	sequence1:4617503..4618963(-)	partial			WP_013389873.1	terminase	37.7	35.2	30.7
MGA_4449	LOCUS_44480	sequence1:4625335..4626093(-)	partial			WP_003916225.1	L,D-transpeptidase LdtMt4	95.6	65.8	71.0
MGA_4465	LOCUS_44640	sequence1:4641980..4642567(-)	partial			WP_005102458.1	class I SAM-dependent methyltransferase	86.7	73.6	36.2
MGA_4480	LOCUS_44790	sequence1:4653084..4653875(-)	partial			WP_011730721.1	transglycosylase family protein	55.5	30.0	84.9
MGA_4516	LOCUS_45150	sequence1:4681986..4682573(+)	partial			WP_015776376.1	50S ribosomal protein L4	30.8	19.6	50.8
MGA_4561	LOCUS_45590	sequence1:4732404..4732736(-)	partial			WP_011730652.1	acetyl-CoA acetyltransferase	70.9	19.3	74.4
MGA_4562	LOCUS_45600	sequence1:4732848..4733084(-)	partial			WP_003897014.1	hypothetical protein	74.4	70.7	60.3
MGA_4564	LOCUS_45620	sequence1:4734281..4734718(+)	partial			WP_226990749.1	rhodanese-like domain-containing protein	47.6	48.5	40.6
MGA_4600	LOCUS_45980	sequence1:4766041..4766403(+)	partial			WP_014878369.1	hypothetical protein	90.8	55.1	45.0
MGA_4605	LOCUS_46030	sequence1:4771715..4772035(-)	partial			WP_003896937.1	chorismate mutase	64.2	78.4	88.4
MGA_4613	LOCUS_46110	sequence1:4781322..4781672(-)	partial			WP_005063565.1	hypothetical protein	75.9	47.2	37.6
MGA_4615	LOCUS_46130	sequence1:4782344..4782790(-)	frameshift		4782791	WP_005082849.1	hypothetical protein	98.0	27.0	41.8
MGA_4622	LOCUS_46200	sequence1:4788699..4789523(+)	partial			WP_011730591.1	DUF5336 domain-containing protein	60.9	54.8	45.7
MGA_4659	LOCUS_46570	sequence1:4832804..4833136(-)	partial			WP_003896874.1	zinc ribbon domain-containing protein	52.7	54.7	87.9
MGA_4668	LOCUS_46660	sequence1:4841967..4842458(+)	partial			WP_003400664.1	SRPBCC family protein	97.5	71.0	67.3
MGA_4675	LOCUS_46730	sequence1:4847722..4848336(+)	partial			WP_005089586.1	TetR/AcrR family transcriptional regulator	82.4	73.7	27.6
MGA_4724	LOCUS_47220	sequence1:4894591..4896738(-)	partial			WP_011730523.1	PE-PPE domain-containing protein	86.9	69.8	52.1
MGA_4726	LOCUS_47240	sequence1:4898024..4898677(-)	partial			WP_193484240.1	Na+/H+ antiporter NhaA	70.0	23.4	37.7
MGA_4737	LOCUS_47350	sequence1:4909541..4909957(-)	partial			WP_235624337.1	hypothetical protein	77.5	53.8	46.5
MGA_4758	LOCUS_47560	sequence1:4931357..4932214(-)	partial			WP_050163392.1	CDP-diacylglycerol diphosphatase	35.8	39.0	34.6
MGA_4762	LOCUS_47600	sequence1:4934371..4936512(-)	partial			WP_210190849.1	FG-GAP-like repeat-containing protein	39.3	6.5	27.9
MGA_4771	LOCUS_47690	sequence1:4942507..4944435(+)	partial			WP_097941806.1	LuxR C-terminal-related transcriptional regulator	75.1	65.2	29.0
MGA_4778	LOCUS_47760	sequence1:4949772..4950101(-)	partial			WP_011730475.1	hypothetical protein	65.1	71.7	51.9
MGA_4816	LOCUS_48140	sequence1:4984632..4985741(+)	partial			WP_011730429.1	hypothetical protein	69.6	65.3	53.3
MGA_4817	LOCUS_48150	sequence1:4985919..4986437(+)	partial			WP_029104321.1	TM2 domain-containing protein	63.4	79.8	41.7
MGA_4823	LOCUS_48210	sequence1:4990507..4990809(+)	partial			WP_003896661.1	hypothetical protein	74.0	80.4	89.2
MGA_4840	LOCUS_48380	sequence1:5006861..5007316(+)	partial			WP_011730411.1	universal stress protein	85.4	48.2	43.0
MGA_4865	LOCUS_48630	sequence1:5029993..5031090(-)	partial			WP_014878271.1	hypothetical protein	47.4	46.3	62.8
MGA_4875	LOCUS_48730	sequence1:5037695..5038408(+)	partial			WP_011730382.1	hypothetical protein	68.8	71.9	49.4
MGA_4883	LOCUS_48810	sequence1:5045916..5046698(+)	partial			WP_003896599.1	acyl-CoA dehydrogenase family protein	94.2	64.5	94.3
MGA_4919	LOCUS_49170	sequence1:5080461..5081471(-)	partial			WP_011730350.1	hypothetical protein	42.3	43.4	86.6
MGA_4934	LOCUS_49320	sequence1:5096820..5098145(-)	partial			WP_003896528.1	hypothetical protein	67.1	77.7	35.3
MGA_4940	LOCUS_49380	sequence1:5103649..5104005(+)	partial			WP_003896524.1	hypothetical protein	68.6	60.4	69.1
MGA_4941	LOCUS_49390	sequence1:5104007..5105494(-)	partial			WP_011730334.1	hypothetical protein	49.9	61.7	40.0
MGA_4964	LOCUS_49620	sequence1:5132254..5132616(+)	partial			WP_003976827.1	RNA-binding S4 domain-containing protein	97.5	62.9	66.7
MGA_5158	LOCUS_51560	sequence1:5338263..5338838(-)	partial			WP_003856453.1	exonuclease domain-containing protein	86.4	35.3	38.6
MGA_5159	LOCUS_51570	sequence1:5338927..5339679(-)	frameshift		5339786	WP_085976166.1	IS3 family transposase	96.0	62.7	43.3
MGA_5220	LOCUS_52180	sequence1:5402191..5402814(-)	frameshift		5401976,5402003,5402846,5402231	WP_013229302.1	IS4 family transposase	92.3	43.9	48.8
MGA_5222	LOCUS_52200	sequence1:5404691..5407132(+)	partial			WP_029104383.1	DUF4185 domain-containing protein	14.9	17.2	34.1
MGA_5226	LOCUS_52230	sequence1:5409218..5410681(-)	partial			WP_000031208.1	FAD-dependent oxidoreductase	62.8	58.6	31.0
MGA_5229	LOCUS_52260	sequence1:5412695..5414167(+)	partial			WP_000031208.1	FAD-dependent oxidoreductase	63.9	55.2	33.3
MGA_5238	LOCUS_52350	sequence1:5422940..5423611(+)	partial			WP_011727450.1	hypothetical protein	65.0	63.6	63.4
MGA_5242	LOCUS_52390	sequence1:5425734..5426363(+)	partial			WP_004524888.1	TetR/AcrR family transcriptional regulator	78.5	72.8	35.2
MGA_5244	LOCUS_52410	sequence1:5427101..5427472(+)	partial			WP_005784478.1	FAD-dependent oxidoreductase	78.9	11.5	35.1
MGA_5262	LOCUS_52590	sequence1:5442231..5442722(-)	partial			WP_011727052.1	LUD domain-containing protein	63.2	47.9	77.7
MGA_5263	LOCUS_52600	sequence1:5443497..5443757(+)	frameshift		5443468,5443396,5443726	WP_013229302.1	IS4 family transposase	88.4	16.1	56.6
MGA_5279	LOCUS_52760	sequence1:5458472..5458888(-)	partial			WP_013229165.1	VOC family protein	69.6	74.4	38.5
MGA_5284	LOCUS_52810	sequence1:5462132..5463550(+)	partial			WP_011730136.1	amidohydrolase family protein	64.6	75.6	23.1
MGA_5325	LOCUS_53220	sequence1:5502007..5502981(+)	partial			WP_126863657.1	LLM class flavin-dependent oxidoreductase	29.3	24.7	36.5
MGA_5327	LOCUS_53240	sequence1:5504062..5505393(-)	partial			WP_013229637.1	TetR/AcrR family transcriptional regulator	72.0	75.8	26.5
MGA_5329	LOCUS_53260	sequence1:5506624..5508318(+)	partial			WP_110170977.1	VWA domain-containing protein	51.2	44.1	33.4
MGA_5359	LOCUS_53560	sequence1:5538384..5538668(+)	partial			WP_042510592.1	hypothetical protein	100.0	70.1	87.2
MGA_5381	LOCUS_53780	sequence1:5567611..5567838(+)	partial			WP_003896152.1	DUF3618 domain-containing protein	74.7	74.7	76.8
MGA_5407	LOCUS_54040	sequence1:5598876..5599190(-)	partial			WP_005087583.1	hypothetical protein	72.1	69.5	48.7
MGA_5408	LOCUS_54050	sequence1:5599402..5600115(-)	internal_stop_codon	5599402..5599404(-)		WP_005076066.1	hypothetical protein	58.2	60.2	43.1
MGA_5411	LOCUS_54080	sequence1:5602021..5602566(+)	partial			WP_005082320.1	hypothetical protein	76.8	67.0	47.5
MGA_5421	LOCUS_54180	sequence1:5616034..5616390(+)	partial			WP_156406754.1	heavy metal translocating P-type ATPase	67.8	9.9	46.2
MGA_5426	LOCUS_54230	sequence1:5621944..5622669(-)	partial			WP_003899809.1	zf-HC2 domain-containing protein	88.0	73.8	39.9
MGA_5463	LOCUS_54600	sequence1:5670202..5670603(-)	partial			WP_011730012.1	DUF732 domain-containing protein	66.2	65.7	66.3
MGA_5484	LOCUS_54810	sequence1:5693308..5693862(-)	frameshift		5694088,5693869	WP_003896017.1	FAD-dependent oxidoreductase	99.5	47.9	78.1
MGA_5485	LOCUS_54820	sequence1:5693766..5694089(-)	frameshift		5694088,5693869	WP_003896017.1	FAD-dependent oxidoreductase	69.2	19.4	64.9
MGA_5489	LOCUS_54860	sequence1:5697218..5698045(+)	frameshift		5697949	WP_003896009.1	trans-acting enoyl reductase family protein	88.7	58.7	79.5
MGA_5490	LOCUS_54870	sequence1:5697955..5698467(+)	frameshift		5697949	WP_003896009.1	trans-acting enoyl reductase family protein	99.4	40.6	79.9
MGA_5493	LOCUS_54900	sequence1:5701939..5703393(+)	partial			WP_003899324.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	72.1	71.9	74.4
MGA_5496	LOCUS_54930	sequence1:5704544..5704903(+)	frameshift		5705104,5704861	WP_011729971.1	Rne/Rng family ribonuclease	58.8	6.8	85.7
MGA_5497	LOCUS_54940	sequence1:5704876..5705154(+)	frameshift		5705104,5705218,5704861,5705430,5705145,5705213	WP_011729971.1	Rne/Rng family ribonuclease	50.0	4.4	78.3
MGA_5498	LOCUS_54950	sequence1:5705142..5707448(+)	frameshift		5705218,5707334,5707472,5707505,5707475,5705429,5705109,5705145,5705531,5705534,5705215	WP_011729971.1	Rne/Rng family ribonuclease	80.5	58.1	77.6
MGA_5499	LOCUS_54960	sequence1:5707619..5707930(-)	frameshift		5707937,5707697,5708165	WP_013229302.1	IS4 family transposase	72.8	16.3	60.0
MGA_5500	LOCUS_54970	sequence1:5707876..5708349(-)	frameshift		5708400,5708162,5708370,5707694,5707934,5708619,5708238	WP_013229302.1	IS4 family transposase	86.0	29.1	44.4
MGA_5501	LOCUS_54980	sequence1:5709178..5709336(+)	frameshift		5709285	WP_003896002.1	50S ribosomal protein L21	69.2	35.0	91.7
MGA_5502	LOCUS_54990	sequence1:5709299..5709487(+)	frameshift		5709285	WP_003896002.1	50S ribosomal protein L21	100.0	60.2	95.2
MGA_5503	LOCUS_55000	sequence1:5709990..5711114(+)	frameshift		5709969,5710257,5711235,5710389,5710284,5710974	WP_003901405.1	GTPase ObgE	87.4	68.9	65.0
MGA_5504	LOCUS_55010	sequence1:5711078..5711452(+)	frameshift		5710970,5711231	WP_011729970.1	GTPase ObgE	61.3	14.6	60.5
MGA_5505	LOCUS_55020	sequence1:5711924..5712409(+)	frameshift		5711816	WP_011729969.1	glutamate 5-kinase	100.0	43.5	67.7
MGA_5509	LOCUS_55040	sequence2:3017..3184(-)	frameshift		3240	WP_011728515.1	hypothetical protein	80.0	28.8	54.5
MGA_5510	LOCUS_55050	sequence2:3121..3492(-)	partial			WP_005093783.1	hypothetical protein	69.9	55.1	47.7
MGA_5512	LOCUS_55070	sequence2:4719..5108(-)	partial			WP_010974232.1	IS21-like element helper ATPase IstB	64.3	32.9	44.6
MGA_5521	LOCUS_55160	sequence2:14061..15140(-)	partial			WP_001016388.1	WGR domain-containing protein	97.5	68.7	46.9
MGA_5524	LOCUS_55190	sequence2:18338..18832(-)	partial			WP_003899334.1	HNH endonuclease	82.3	60.8	40.7
MGA_5529	LOCUS_55240	sequence2:23677..26343(-)	partial			WP_013225493.1	hypothetical protein	27.3	59.9	29.5
MGA_5535	LOCUS_55300	sequence2:29212..29547(-)	frameshift		29561	WP_109559953.1	IS3 family transposase	99.1	23.0	59.1
MGA_5536	LOCUS_55310	sequence2:29532..30185(-)	frameshift		29560,30271	WP_109559953.1	IS3 family transposase	96.3	44.0	69.4
MGA_5548	LOCUS_55430	sequence2:38287..38961(+)	frameshift		38154,38212	WP_029104519.1	DUF2993 domain-containing protein	99.1	64.8	39.7
MGA_5560	LOCUS_55550	sequence2:48572..49684(-)	partial			WP_011031229.1	DNA cytosine methyltransferase	81.4	71.2	28.7
MGA_5570	LOCUS_55650	sequence2:55021..56133(-)	partial			WP_003905037.1	IS110 family transposase	91.9	59.6	53.6
MGA_5603	LOCUS_55980	sequence2:88081..88788(-)	partial			WP_013390253.1	DUF1524 domain-containing protein	83.0	54.7	40.1
MGA_5622	LOCUS_56170	sequence2:99319..100263(-)	partial			WP_005109719.1	ATP-dependent DNA ligase	94.9	36.1	39.0
MGA_5623	LOCUS_56180	sequence2:100535..100801(+)	frameshift		100532	WP_011729255.1	serine/threonine-protein kinase	78.4	14.0	71.0
MGA_5628	LOCUS_56230	sequence2:103946..105205(+)	partial			WP_011031533.1	serine/threonine-protein kinase	55.1	31.0	32.0
MGA_5656	LOCUS_56510	sequence2:123856..124326(-)	partial			WP_011068203.1	RNA ligase	83.3	28.5	34.3
MGA_5669	LOCUS_56640	sequence2:130593..131897(+)	partial			WP_011028040.1	TerD family protein	60.4	72.4	31.4
MGA_5685	LOCUS_56800	sequence2:145183..146331(-)	partial			WP_011029781.1	FxSxx-COOH system tetratricopeptide repeat protein	91.9	36.9	26.3
MGA_5692	LOCUS_56870	sequence2:149671..150750(+)	partial			WP_003401751.1	hypothetical protein	46.8	79.6	28.6
MGA_5723	LOCUS_57180	sequence2:169252..169911(-)	partial			WP_011266646.1	TerD family protein	94.1	54.2	49.5
MGA_5728	LOCUS_57230	sequence2:174327..175586(+)	frameshift		175545,175538	WP_011028307.1	phosphoribosyltransferase	92.1	47.2	42.2
MGA_5729	LOCUS_57240	sequence2:175583..176695(+)	frameshift		175545,175538	WP_011028307.1	phosphoribosyltransferase	97.8	43.3	67.2
MGA_5732	LOCUS_57270	sequence2:178867..180477(+)	partial			WP_011029326.1	VWA domain-containing protein	27.1	35.5	34.5
MGA_5734	LOCUS_57290	sequence2:181746..182465(-)	partial			WP_011728331.1	hypothetical protein	83.3	74.4	39.1
MGA_5743	LOCUS_57380	sequence2:190178..191035(+)	partial			WP_003892129.1	hypothetical protein	40.0	67.0	44.2
MGA_5749	LOCUS_57440	sequence2:194767..195675(-)	partial			WP_011459264.1	sce7726 family protein	70.2	76.4	28.1
MGA_5751	LOCUS_57460	sequence2:197371..198114(-)	partial			WP_003899735.1	FHA domain-containing protein	92.3	58.7	43.0
MGA_5757	LOCUS_57520	sequence2:202454..203419(+)	partial			WP_162139554.1	sensor domain-containing protein	46.4	61.5	39.6
MGA_5761	LOCUS_57560	sequence2:206766..208829(-)	partial			WP_003410735.1	serine/threonine protein kinase PknJ	40.6	47.5	61.3
MGA_5767	LOCUS_57620	sequence2:215843..217234(+)	partial			WP_011726641.1	MinD/ParA family protein	61.8	60.3	57.3
MGA_5771	LOCUS_57660	sequence2:219646..220473(-)	frameshift		220517	WP_085976170.1	IS3 family transposase	100.0	71.2	92.4
MGA_5787	LOCUS_57820	sequence2:232579..233631(-)	partial			WP_011674167.1	ArdC-like ssDNA-binding domain-containing protein	66.9	27.7	33.9
MGA_5809	LOCUS_58040	sequence2:256792..258411(-)	partial			WP_003399995.1	type VII secretion system ESX-1 target EspB	27.8	30.9	31.2
MGA_5811	LOCUS_58060	sequence2:258898..259914(-)	partial			WP_010963632.1	NlpC/P60 family protein	38.8	33.7	39.7
MGA_5812	LOCUS_58070	sequence2:259914..260936(-)	partial			WP_003917259.1	hypothetical protein	36.8	41.4	56.8
MGA_5815	LOCUS_58100	sequence2:262602..264473(-)	partial			WP_052049378.1	DUF853 family protein	76.7	63.8	27.6
MGA_5836	LOCUS_58310	sequence2:286355..287665(+)	frameshift		287557	WP_005112775.1	TniQ family protein	91.1	45.5	38.5
MGA_5837	LOCUS_58320	sequence2:287662..288978(+)	frameshift		287557	WP_005112775.1	TniQ family protein	99.1	50.1	39.4
MGA_5846	LOCUS_58410	sequence2:300531..301844(+)	partial			WP_012296639.1	translation initiation factor IF-2	22.9	11.6	56.6