{ "type": "genome", "identifier": "GCF_010729105.1", "organism": "Mycobacterium saskatchewanense", "title": "Mycobacterium saskatchewanense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Department of Infection Metagenomics, Osaka University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_010729105.1", "bioproject": "PRJNA224116", "biosample": "SAMD00153183", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "220927", "species_taxid": "220927", "organism_name": "Mycobacterium saskatchewanense", "infraspecific_name": "strain=JCM 13016", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/06", "asm_name": "ASM1072910v1", "asm_submitter": "Department of Infection Metagenomics, Osaka University", "gbrs_paired_asm": "GCA_010729105.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/010/729/105/GCF_010729105.1_ASM1072910v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6008916", "genome_size_ungapped": "6008916", "gc_percent": "68.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_010729105.1-RS_2024_12_13", "annotation_date": "2024-12-13", "total_gene_count": "5721", "protein_coding_gene_count": "5455", "non_coding_gene_count": "54", "pubmed_id": "31287781" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-06", "dateModified": "2020-02-06", "datePublished": "2020-02-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Mycobacterium saskatchewanense" ], "sample_taxid": [ "220927" ], "sample_host_organism": [], 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95, "status": "below_threshold" }, { "organism_name": "Mycobacterium intracellulare", "strain": "strain=ATCC 13950", "accession": "GCA_000172115.1", "taxid": 1767, "species_taxid": 1767, "relation_to_type": "suspected-type", "validated": true, "ani": 82.7917, "matched_fragments": 1037, "total_fragments": 2002, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium intracellulare", "strain": "strain=ATCC 13950", "accession": "GCA_000277125.1", "taxid": 1767, "species_taxid": 1767, "relation_to_type": "suspected-type", "validated": true, "ani": 82.7776, "matched_fragments": 1168, "total_fragments": 2002, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium intracellulare", "strain": "strain=ATCC 13950", "accession": "GCA_023278525.1", "taxid": 1767, "species_taxid": 1767, "relation_to_type": "suspected-type", "validated": true, "ani": 82.747, "matched_fragments": 1171, "total_fragments": 2002, "ani_threshold": 95, "status": 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