# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:18..503(-)	partial			WP_003891333.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	94.4	23.0	74.8
MGA_3	LOCUS_00030	sequence1:1280..1684(-)	frameshift		1737	WP_011726603.1	DNA replication/repair protein RecF	93.3	32.6	82.4
MGA_4	LOCUS_00040	sequence1:1944..2432(-)	frameshift		1739,1991	WP_011726603.1	DNA replication/repair protein RecF	90.7	38.8	82.6
MGA_6	LOCUS_00060	sequence1:3556..4185(-)	frameshift		4264,3601,4192	WP_011726602.1	DNA polymerase III subunit beta	94.7	49.9	84.9
MGA_7	LOCUS_00070	sequence1:4076..4537(-)	frameshift		4264,4192	WP_011726602.1	DNA polymerase III subunit beta	55.6	21.7	86.0
MGA_8	LOCUS_00080	sequence1:5085..5267(-)	frameshift		5316	WP_003898364.1	chromosomal replication initiator protein DnaA	100.0	11.9	90.0
MGA_9	LOCUS_00090	sequence1:5902..6552(-)	frameshift		5634,5997	WP_003898364.1	chromosomal replication initiator protein DnaA	86.1	39.7	66.2
MGA_12	LOCUS_00120	sequence1:7656..7943(+)	partial			WP_003899766.1	membrane protein insertion efficiency factor YidD	78.9	62.5	73.3
MGA_13	LOCUS_00130	sequence1:7956..8324(+)	frameshift		8201	WP_011731644.1	membrane protein insertase YidC	67.2	22.3	89.0
MGA_14	LOCUS_00140	sequence1:8213..9124(+)	frameshift		8201	WP_011731644.1	membrane protein insertase YidC	94.7	76.0	65.6
MGA_19	LOCUS_00190	sequence1:12503..12757(+)	frameshift		12733	WP_003400171.1	hypothetical protein	56.0	19.3	83.0
MGA_22	LOCUS_00220	sequence1:14979..15752(-)	frameshift		15787	WP_011731638.1	thioredoxin-disulfide reductase	95.3	78.8	84.1
MGA_23	LOCUS_00230	sequence1:15752..16312(-)	frameshift		15787	WP_011731638.1	thioredoxin-disulfide reductase	34.4	20.6	68.8
MGA_29	LOCUS_00290	sequence1:23377..23931(-)	frameshift		23950	WP_011731632.1	NUDIX hydrolase	100.0	61.6	88.6
MGA_33	LOCUS_00330	sequence1:27042..27704(-)	frameshift		27706	WP_003400431.1	MFS transporter	97.7	48.8	56.7
MGA_35	LOCUS_00350	sequence1:27934..28323(-)	frameshift		27705,27978	WP_003898343.1	MFS transporter	86.8	26.2	65.2
MGA_36	LOCUS_00360	sequence1:28467..28811(+)	frameshift		28763	WP_003400460.1	YqgE/AlgH family protein	90.4	51.0	82.5
MGA_37	LOCUS_00370	sequence1:28775..29065(+)	frameshift		28763	WP_003898342.1	YqgE/AlgH family protein	97.9	46.8	85.1
MGA_39	LOCUS_00390	sequence1:29473..30210(-)	frameshift		30196,30238	WP_010907480.1	LpqN/LpqT family lipoprotein	83.3	68.3	60.3
MGA_89	LOCUS_00890	sequence1:79645..81063(+)	partial			WP_011085728.1	phosphotransferase family protein	57.8	84.8	30.6
MGA_92	LOCUS_00920	sequence1:83234..83548(-)	frameshift,internal_stop_codon	83666..83668(-),83654..83656(-),83234..83236(-)	83711	WP_211285741.1	IS3 family transposase	100.0	27.9	75.7
MGA_93	LOCUS_00930	sequence1:83676..83897(-)	frameshift,internal_stop_codon	83666..83668(-),83654..83656(-)	83711	WP_211285741.1	IS3 family transposase	80.8	15.4	78.0
MGA_98	LOCUS_00980	sequence1:87831..88457(+)	partial			WP_013094828.1	TetR/AcrR family transcriptional regulator	58.7	60.8	35.2
MGA_107	LOCUS_01070	sequence1:100104..100526(-)	partial			WP_003896720.1	hypothetical protein	48.6	66.0	44.3
MGA_116	LOCUS_01160	sequence1:107966..109426(+)	partial			WP_010968356.1	APC family permease	20.6	16.7	32.0
MGA_154	LOCUS_01540	sequence1:145485..146159(+)	partial			WP_174519581.1	TetR family transcriptional regulator	75.4	68.0	44.1
MGA_173	LOCUS_01730	sequence1:162007..163737(+)	partial			WP_011391751.1	PucR family transcriptional regulator ligand-binding domain-containing protein	66.3	75.8	29.4
MGA_184	LOCUS_01840	sequence1:175241..175462(+)	partial			WP_004200388.1	NAD(P)-dependent alcohol dehydrogenase	93.2	20.3	50.0
MGA_191	LOCUS_01910	sequence1:184985..185575(+)	partial			WP_001104669.1	class I SAM-dependent methyltransferase	73.5	59.4	28.5
MGA_195	LOCUS_01950	sequence1:189260..189892(+)	partial			WP_011726810.1	TetR/AcrR family transcriptional regulator	35.7	37.5	37.3
MGA_207	LOCUS_02070	sequence1:200681..202801(-)	partial			WP_011731372.1	HNH endonuclease signature motif containing protein	60.9	79.3	42.5
MGA_216	LOCUS_02160	sequence1:209633..210019(-)	partial			WP_003417257.1	pilin structural subunit Mtp	60.2	79.6	41.7
MGA_221	LOCUS_02210	sequence1:213052..213405(-)	partial			WP_005088224.1	PAS and ANTAR domain-containing protein	82.1	42.5	42.7
MGA_222	LOCUS_02220	sequence1:213747..214262(+)	partial			WP_003402171.1	hypothetical protein	50.3	58.5	43.0
MGA_232	LOCUS_02320	sequence1:224917..226176(-)	partial			WP_010939245.1	bifunctional diguanylate cyclase/phosphodiesterase	50.6	27.2	34.4
MGA_273	LOCUS_02730	sequence1:264945..265415(-)	partial			WP_011728164.1	hypothetical protein	60.3	53.1	62.8
MGA_278	LOCUS_02780	sequence1:269438..269869(-)	partial			WP_003897192.1	hypothetical protein	63.6	60.6	45.1
MGA_281	LOCUS_02810	sequence1:272001..272945(-)	partial			WP_005085283.1	endonuclease/exonuclease/phosphatase family protein	71.3	71.9	34.8
MGA_283	LOCUS_02830	sequence1:274753..276114(-)	partial			WP_003403501.1	mycofactocin biosynthesis glycosyltransferase MftF	42.2	37.4	31.3
MGA_290	LOCUS_02900	sequence1:281493..282449(-)	frameshift		282498	WP_010950332.1	glycoside hydrolase family 6 protein	99.1	83.9	69.0
MGA_322	LOCUS_03220	sequence1:314232..315155(-)	partial			WP_236615531.1	NAD(P)-binding protein	98.0	40.5	29.6
MGA_338	LOCUS_03380	sequence1:336688..337638(+)	frameshift		337503	WP_011970220.1	aspartate aminotransferase family protein	86.1	62.5	45.3
MGA_339	LOCUS_03390	sequence1:337530..337943(+)	frameshift		337503	WP_011970220.1	aspartate aminotransferase family protein	100.0	31.6	48.6
MGA_375	LOCUS_03750	sequence1:374217..374498(-)	partial			WP_011119905.1	GlsB/YeaQ/YmgE family stress response membrane protein	73.1	71.1	61.8
MGA_404	LOCUS_04040	sequence1:402333..403061(+)	partial			WP_005085940.1	TetR/AcrR family transcriptional regulator	59.9	66.7	32.2
MGA_410	LOCUS_04100	sequence1:406784..407227(-)	partial			WP_003400664.1	SRPBCC family protein	98.0	67.0	62.7
MGA_417	LOCUS_04170	sequence1:411776..412624(+)	partial			WP_003405603.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	60.3	67.7	71.2
MGA_443	LOCUS_04430	sequence1:462134..464263(-)	partial			WP_072084141.1	two-component system QseEF-associated lipoprotein QseG	16.6	29.1	43.8
MGA_457	LOCUS_04570	sequence1:478186..479070(+)	partial			WP_010942960.1	DUF1295 domain-containing protein	67.3	76.6	32.0
MGA_461	LOCUS_04610	sequence1:481919..483025(-)	frameshift		483063	WP_011731375.1	carboxyl transferase domain-containing protein	99.7	71.2	77.7
MGA_462	LOCUS_04620	sequence1:482917..483468(-)	frameshift		483063	WP_011731375.1	carboxyl transferase domain-containing protein	75.4	26.8	77.5
MGA_473	LOCUS_04730	sequence1:494466..495458(+)	partial			WP_003908487.1	Ig-like domain-containing protein	76.7	73.0	73.9
MGA_486	LOCUS_04860	sequence1:509183..512458(-)	partial			WP_011726778.1	MMPL family transporter	58.6	65.5	55.0
MGA_506	LOCUS_05060	sequence1:532136..533452(-)	partial			WP_011731269.1	septum formation family protein	60.3	60.2	43.9
MGA_507	LOCUS_05070	sequence1:533691..533924(+)	partial			WP_003411082.1	hypothetical protein	68.8	79.1	54.7
MGA_536	LOCUS_05360	sequence1:567909..569390(-)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	73.6	71.2	35.7
MGA_606	LOCUS_06060	sequence1:647436..649091(+)	partial			WP_012256402.1	PucR family transcriptional regulator	70.4	75.0	27.0
MGA_629	LOCUS_06290	sequence1:671372..673531(-)	partial			WP_003906521.1	HNH endonuclease signature motif containing protein	41.9	66.3	44.5
MGA_662	LOCUS_06620	sequence1:710501..712336(+)	partial			WP_011727085.1	Hsp70 family protein	73.0	74.7	52.7
MGA_664	LOCUS_06640	sequence1:712756..713157(+)	partial			WP_003897192.1	hypothetical protein	78.2	70.1	45.2
MGA_675	LOCUS_06750	sequence1:723376..724929(+)	partial			WP_011727115.1	hypothetical protein	75.4	70.1	60.4
MGA_698	LOCUS_06980	sequence1:752184..752873(-)	partial			WP_172451240.1	nuclear transport factor 2 family protein	96.9	62.6	51.9
MGA_700	LOCUS_07000	sequence1:753944..754783(+)	partial			WP_203873878.1	alpha/beta hydrolase fold domain-containing protein	84.9	65.4	39.5
MGA_709	LOCUS_07090	sequence1:764690..765367(-)	partial			WP_010902223.1	SDR family oxidoreductase	80.4	67.4	31.0
MGA_721	LOCUS_07210	sequence1:777379..777843(-)	partial			WP_003401853.1	membrane protein	87.7	58.5	34.8
MGA_751	LOCUS_07510	sequence1:804753..805001(+)	internal_stop_codon	804711..804713(+)		WP_003401383.1	type II toxin-antitoxin system prevent-host-death family antitoxin	92.7	45.0	64.5
MGA_765	LOCUS_07650	sequence1:816396..816662(+)	partial			WP_003417918.1	type II toxin-antitoxin system Phd/YefM family antitoxin	63.6	55.9	59.6
MGA_770	LOCUS_07700	sequence1:819446..820288(-)	partial			WP_049769928.1	polysaccharide deacetylase family protein	73.9	73.7	61.4
MGA_783	LOCUS_07830	sequence1:830100..830354(+)	partial			WP_029104367.1	LytR C-terminal domain-containing protein	100.0	54.2	67.9
MGA_821	LOCUS_08210	sequence1:871065..872801(+)	partial			WP_015909439.1	flagellar filament outer layer protein FlaA	39.3	24.7	29.9
MGA_838	LOCUS_08380	sequence1:887912..888589(+)	partial			WP_003892345.1	iron-regulated heparin-binding hemagglutinin HbhA	74.7	76.3	66.1
MGA_840	LOCUS_08400	sequence1:888954..889391(+)	partial			WP_014876908.1	DUF2599 domain-containing protein	72.4	76.6	61.0
MGA_878	LOCUS_08780	sequence1:921341..921937(-)	partial			WP_005086604.1	TetR/AcrR family transcriptional regulator	72.2	73.1	32.7
MGA_940	LOCUS_09400	sequence1:982869..983414(+)	partial			WP_005061551.1	hypothetical protein	67.4	74.8	46.0
MGA_950	LOCUS_09500	sequence1:992844..993149(-)	partial			WP_003895071.1	hypothetical protein	63.4	72.9	48.4
MGA_955	LOCUS_09550	sequence1:997405..998979(+)	partial			WP_000929458.1	DNA-binding transcriptional regulator CdaR	17.2	23.1	44.6
MGA_959	LOCUS_09590	sequence1:1005064..1005684(+)	partial			WP_003975552.1	cobalt-precorrin-6A reductase	80.6	66.3	47.1
MGA_960	LOCUS_09600	sequence1:1005681..1008098(-)	partial			WP_011730319.1	HNH endonuclease signature motif containing protein	33.5	44.9	39.6
MGA_974	LOCUS_09740	sequence1:1020706..1021722(+)	partial			WP_011727488.1	hypothetical protein	85.2	70.5	31.1
MGA_979	LOCUS_09790	sequence1:1025124..1025384(-)	partial			WP_011104312.1	2-oxoglutarate and iron-dependent oxygenase domain-containing protein	51.2	13.1	56.8
MGA_980	LOCUS_09800	sequence1:1025446..1026159(+)	partial			WP_011727568.1	ATP-binding domain-containing protein	98.7	42.6	82.1
MGA_985	LOCUS_09850	sequence1:1030078..1030758(-)	partial			WP_011730517.1	MPT63 family protein	93.4	62.1	31.5
MGA_999	LOCUS_09990	sequence1:1045651..1046790(-)	partial			WP_052846493.1	AAA family ATPase	48.0	32.4	28.8
MGA_1014	LOCUS_10140	sequence1:1058867..1059226(-)	partial			WP_005110193.1	hypothetical protein	68.1	78.8	47.6
MGA_1038	LOCUS_10380	sequence1:1084516..1085601(-)	partial			WP_012660571.1	beta-galactosidase	69.0	45.5	29.0
MGA_1041	LOCUS_10410	sequence1:1088584..1090956(+)	partial			WP_010875978.1	DUF2206 domain-containing protein	47.5	51.7	25.0
MGA_1075	LOCUS_10750	sequence1:1131561..1135151(-)	partial			WP_048066275.1	PKD domain-containing protein	23.6	16.6	34.8
MGA_1082	LOCUS_10820	sequence1:1145072..1146811(+)	partial			WP_015909439.1	flagellar filament outer layer protein FlaA	44.9	29.6	29.2
MGA_1104	LOCUS_11040	sequence1:1172765..1173535(+)	partial			WP_005082863.1	protein phosphatase 2C domain-containing protein	98.8	49.9	29.2
MGA_1147	LOCUS_11470	sequence1:1208701..1209393(+)	partial			WP_003403680.1	30S ribosomal protein S5	74.8	78.6	88.4
MGA_1162	LOCUS_11620	sequence1:1221635..1222021(+)	partial			WP_013227381.1	MarR family transcriptional regulator	97.7	72.2	39.4
MGA_1179	LOCUS_11790	sequence1:1238031..1238624(+)	partial			WP_003418346.1	50S ribosomal protein L17	62.9	68.9	93.5
MGA_1198	LOCUS_11980	sequence1:1253271..1253969(-)	partial			WP_013222045.1	YcnI family protein	67.2	62.0	45.3
MGA_1217	LOCUS_12170	sequence1:1273556..1274671(+)	partial			WP_005111994.1	type VII secretion-associated protein	35.8	30.4	48.2
MGA_1236	LOCUS_12360	sequence1:1290394..1291920(+)	partial			WP_003418300.1	hypothetical protein	45.7	49.7	40.1
MGA_1238	LOCUS_12380	sequence1:1292898..1295129(-)	partial			WP_003912345.1	HNH endonuclease signature motif containing protein	33.8	45.9	41.5
MGA_1261	LOCUS_12610	sequence1:1316716..1317897(+)	partial			WP_003893005.1	anti-sigma-D factor RsdA	50.6	49.6	60.3
MGA_1289	LOCUS_12890	sequence1:1349353..1349697(+)	partial			WP_005088224.1	PAS and ANTAR domain-containing protein	85.1	43.4	50.0
MGA_1302	LOCUS_13020	sequence1:1361460..1362140(+)	partial			WP_013227853.1	IclR family transcriptional regulator	61.5	54.4	36.0
MGA_1364	LOCUS_13640	sequence1:1431503..1431913(-)	partial			WP_011728289.1	nitroreductase	93.4	59.1	52.8
MGA_1380	LOCUS_13800	sequence1:1446238..1447230(-)	frameshift		1446425,1447220	WP_011087175.1	prolyl aminopeptidase	79.7	83.0	54.0
MGA_1423	LOCUS_14230	sequence1:1497637..1498533(-)	frameshift		1497657	WP_011731372.1	HNH endonuclease signature motif containing protein	95.3	51.2	43.7
MGA_1448	LOCUS_14480	sequence1:1522670..1523350(+)	partial			WP_005765105.1	acyltransferase	65.5	54.6	47.7
MGA_1478	LOCUS_14780	sequence1:1555724..1556764(+)	partial			WP_015909439.1	flagellar filament outer layer protein FlaA	91.3	35.6	31.5
MGA_1506	LOCUS_15060	sequence1:1585856..1586371(-)	frameshift		1586351	WP_003416932.1	Rv3235 family protein	94.2	80.3	45.7
MGA_1534	LOCUS_15340	sequence1:1611131..1612045(-)	partial			WP_011728023.1	MmpS family transport accessory protein	68.8	74.5	49.3
MGA_1568	LOCUS_15680	sequence1:1648995..1651343(-)	partial			WP_010888195.1	sensor histidine kinase	24.4	39.2	29.7
MGA_1574	LOCUS_15740	sequence1:1654933..1656216(-)	partial			WP_106188569.1	TetR/AcrR family transcriptional regulator	34.9	76.2	32.7
MGA_1582	LOCUS_15820	sequence1:1663241..1664113(+)	partial			WP_011726785.1	fatty-acid--CoA ligase FadD4	99.7	57.3	76.5
MGA_1586	LOCUS_15860	sequence1:1667093..1667938(+)	partial			WP_010965999.1	short-chain-enoyl-CoA hydratase	69.8	75.9	34.3
MGA_1597	LOCUS_15970	sequence1:1677584..1678903(-)	partial			WP_013225727.1	acyl-CoA dehydrogenase family protein	66.7	80.7	33.9
MGA_1602	LOCUS_16020	sequence1:1682974..1684185(+)	partial			WP_013228930.1	cytochrome P450	74.7	74.2	40.7
MGA_1606	LOCUS_16060	sequence1:1689197..1689793(-)	partial			WP_013223519.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	82.8	55.3	35.7
MGA_1609	LOCUS_16090	sequence1:1692772..1693569(+)	frameshift		1692769	WP_003896242.1	acyl-CoA dehydrogenase family protein	97.0	67.3	39.5
MGA_1610	LOCUS_16100	sequence1:1693559..1694476(+)	partial			WP_005113158.1	acyl-CoA dehydrogenase	39.3	39.9	40.6
MGA_1614	LOCUS_16140	sequence1:1697033..1698208(+)	frameshift		1697809,1697018,1697866,1697061	WP_011730106.1	OB-fold domain-containing protein	95.7	68.4	36.7
MGA_1627	LOCUS_16270	sequence1:1710761..1711033(+)	frameshift		1710684	WP_003403365.1	ribonuclease VapC6	87.8	62.2	77.2
MGA_1630	LOCUS_16300	sequence1:1712429..1713619(-)	partial			WP_011731195.1	acetyl-CoA hydrolase/transferase C-terminal domain-containing protein	52.0	51.5	29.5
MGA_1641	LOCUS_16410	sequence1:1726675..1727274(+)	partial			WP_005086013.1	TetR/AcrR family transcriptional regulator	26.6	27.0	52.6
MGA_1647	LOCUS_16470	sequence1:1730827..1732017(+)	partial			WP_011730106.1	OB-fold domain-containing protein	98.2	69.3	48.6
MGA_1651	LOCUS_16510	sequence1:1735014..1735607(+)	frameshift		1735472,1735469	WP_010907521.1	alpha/beta hydrolase family protein	64.0	55.5	57.5
MGA_1652	LOCUS_16520	sequence1:1735549..1735794(+)	frameshift		1735469	WP_011731260.1	alpha/beta hydrolase family protein	100.0	27.0	61.7
MGA_1662	LOCUS_16620	sequence1:1742721..1746158(+)	partial			WP_011728047.1	BTAD domain-containing putative transcriptional regulator	74.2	75.4	25.3
MGA_1682	LOCUS_16820	sequence1:1767440..1768471(+)	partial			WP_011023637.1	5,10-methylenetetrahydromethanopterin reductase	59.5	59.1	34.6
MGA_1692	LOCUS_16920	sequence1:1778697..1778984(+)	partial			WP_011729262.1	hypothetical protein	80.0	72.8	59.2
MGA_1711	LOCUS_17110	sequence1:1797803..1798198(-)	partial			WP_010908041.1	hypothetical protein	48.1	79.7	60.3
MGA_1718	LOCUS_17180	sequence1:1804559..1805155(-)	internal_stop_codon	1805168..1805170(-)		WP_003416447.1	NADH-quinone oxidoreductase subunit NuoI	86.9	81.5	81.4
MGA_1748	LOCUS_17480	sequence1:1837275..1838795(+)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	62.8	51.3	56.9
MGA_1749	LOCUS_17490	sequence1:1838927..1840459(-)	partial			WP_011727267.1	serine/threonine-protein kinase	62.4	62.7	60.8
MGA_1751	LOCUS_17510	sequence1:1841685..1843247(-)	partial			WP_010950585.1	serine/threonine protein kinase PknE	70.6	65.2	44.8
MGA_1756	LOCUS_17560	sequence1:1847278..1848786(+)	partial			WP_003898998.1	serine/threonine protein kinase PknE	76.3	70.0	45.6
MGA_1757	LOCUS_17570	sequence1:1849064..1849627(+)	partial			WP_002220315.1	murein tripeptide amidase MpaA	87.2	71.9	31.8
MGA_1758	LOCUS_17580	sequence1:1849783..1851381(-)	partial			WP_014878013.1	serine/threonine-protein kinase	53.2	53.6	52.5
MGA_1759	LOCUS_17590	sequence1:1851866..1853158(-)	partial			WP_005112106.1	GGDEF domain-containing protein	69.3	78.4	29.2
MGA_1807	LOCUS_18070	sequence1:1898323..1899456(+)	partial			WP_011393297.1	site-specific integrase	67.6	65.1	26.7
MGA_1821	LOCUS_18210	sequence1:1910947..1912176(-)	partial			WP_011027309.1	helix-turn-helix domain-containing protein	70.9	67.8	27.5
MGA_1837	LOCUS_18370	sequence1:1928522..1929457(-)	partial			WP_003419601.1	phytanoyl-CoA dioxygenase family protein	63.7	65.6	32.3
MGA_1859	LOCUS_18580	sequence1:1947968..1949788(-)	partial			WP_015909439.1	flagellar filament outer layer protein FlaA	38.1	26.4	32.0
MGA_1889	LOCUS_18880	sequence1:1979715..1980596(+)	frameshift		1979656	WP_011728590.1	3-deoxy-7-phosphoheptulonate synthase	95.2	79.7	70.4
MGA_1904	LOCUS_19030	sequence1:1992608..1993210(-)	partial			WP_011029568.1	TetR/AcrR family transcriptional regulator	59.5	59.9	32.8
MGA_1915	LOCUS_19140	sequence1:2002360..2004060(-)	partial			WP_011731534.1	hypothetical protein	67.3	77.8	58.3
MGA_1918	LOCUS_19170	sequence1:2006099..2007499(-)	partial			WP_011728552.1	PE-PPE domain-containing protein	73.6	61.4	38.5
MGA_1954	LOCUS_19530	sequence1:2040456..2041385(+)	partial			WP_011728217.1	hypothetical protein	66.0	73.1	37.6
MGA_1956	LOCUS_19550	sequence1:2043193..2043828(-)	internal_stop_codon	2043838..2043840(-)		WP_011728218.1	Rv1355c family protein	96.2	27.8	51.7
MGA_1957	LOCUS_19560	sequence1:2043838..2045319(-)	internal_stop_codon	2043838..2043840(-)		WP_010908521.1	Rv1355c family protein	94.9	64.9	54.9
MGA_1972	LOCUS_19710	sequence1:2059626..2060852(+)	partial			WP_003694771.1	cupin domain-containing protein	59.6	61.5	22.2
MGA_1992	LOCUS_19910	sequence1:2080323..2081432(-)	partial			WP_015909439.1	flagellar filament outer layer protein FlaA	92.4	38.5	25.6
MGA_1995	LOCUS_19940	sequence1:2084034..2085089(-)	partial			WP_012257167.1	glycosyltransferase family 1 protein	75.5	74.1	33.6
MGA_1998	LOCUS_19970	sequence1:2088041..2088724(-)	partial			WP_010884006.1	sensor domain-containing diguanylate cyclase	64.3	27.5	40.1
MGA_2042	LOCUS_20410	sequence1:2136112..2136684(+)	frameshift		2136092	WP_011727372.1	NUDIX hydrolase	96.3	67.8	81.2
MGA_2105	LOCUS_21040	sequence1:2202447..2203163(+)	frameshift,internal_stop_codon	2203161..2203163(+),2203312..2203314(+)	2203226	WP_003415107.1	DNA-binding protein HupB	44.1	49.1	95.2
MGA_2148	LOCUS_21470	sequence1:2249908..2250378(+)	partial			WP_011728340.1	30S ribosomal protein S16	68.6	68.6	91.6
MGA_2157	LOCUS_21560	sequence1:2255519..2255992(+)	partial			WP_011728691.1	SDR family NAD(P)-dependent oxidoreductase	91.1	53.8	76.2
MGA_2176	LOCUS_21750	sequence1:2264281..2264784(-)	partial			WP_023004221.1	toll/interleukin-1 receptor domain-containing protein	94.0	66.0	67.5
MGA_2178	LOCUS_21770	sequence1:2267151..2267534(+)	partial			WP_011728691.1	SDR family NAD(P)-dependent oxidoreductase	100.0	47.7	70.9
MGA_2193	LOCUS_21920	sequence1:2280326..2280817(-)	partial			WP_003414678.1	M23 family metallopeptidase	95.7	63.1	63.1
MGA_2211	LOCUS_22100	sequence1:2298045..2298668(+)	frameshift		2297992	WP_008783747.1	IS30-like element ISBlo4 family transposase	94.2	45.9	56.4
MGA_2221	LOCUS_22200	sequence1:2306738..2308426(+)	partial			WP_011731372.1	HNH endonuclease signature motif containing protein	52.0	54.2	43.4
MGA_2265	LOCUS_22640	sequence1:2351893..2354676(+)	partial			WP_012296639.1	translation initiation factor IF-2	68.1	69.2	91.1
MGA_2304	LOCUS_23030	sequence1:2392567..2392851(-)	partial			WP_011729143.1	hypothetical protein	89.4	74.0	57.1
MGA_2341	LOCUS_23400	sequence1:2429904..2430371(+)	partial			WP_011728555.1	LysM peptidoglycan-binding domain-containing protein	87.1	69.2	60.6
MGA_2342	LOCUS_23410	sequence1:2430577..2430918(+)	partial			WP_005057199.1	transcriptional regulator NrdR	95.6	70.1	92.6
MGA_2389	LOCUS_23880	sequence1:2474302..2474778(-)	partial			WP_013225359.1	YbhB/YbcL family Raf kinase inhibitor-like protein	94.3	44.6	58.4
MGA_2390	LOCUS_23890	sequence1:2474843..2475343(-)	partial			WP_010908671.1	lipoprotein	70.5	75.8	59.0
MGA_2399	LOCUS_23980	sequence1:2482899..2484302(+)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	57.4	44.2	63.7
MGA_2416	LOCUS_24150	sequence1:2497596..2497985(-)	partial			WP_005074775.1	DUF6319 family protein	63.6	67.5	62.2
MGA_2424	LOCUS_24230	sequence1:2503983..2515001(+)	frameshift		2514821	WP_012296729.1	non-ribosomal peptide synthetase	64.8	69.7	51.6
MGA_2439	LOCUS_24380	sequence1:2557210..2557671(+)	frameshift		2557169	WP_013227879.1	DUF1684 domain-containing protein	99.3	58.5	60.5
MGA_2442	LOCUS_24410	sequence1:2559585..2560289(+)	partial			WP_011268530.1	ABC transporter ATP-binding protein	85.9	73.4	57.7
MGA_2448	LOCUS_24470	sequence1:2564889..2567168(-)	partial			WP_003906341.1	HNH endonuclease signature motif containing protein	25.7	39.6	49.5
MGA_2494	LOCUS_24930	sequence1:2612874..2614709(+)	partial			WP_011728723.1	protein translocase subunit SecD	62.0	61.1	72.3
MGA_2566	LOCUS_25650	sequence1:2690015..2690860(-)	frameshift		2690868	WP_003407257.1	NAD(P)/FAD-dependent oxidoreductase	99.6	56.9	68.9
MGA_2567	LOCUS_25660	sequence1:2690827..2691492(-)	frameshift		2690871	WP_003407257.1	NAD(P)/FAD-dependent oxidoreductase	97.3	43.7	71.2
MGA_2594	LOCUS_25930	sequence1:2717620..2718636(-)	partial			WP_011975714.1	ankyrin repeat domain-containing protein	65.1	38.5	40.4
MGA_2620	LOCUS_26190	sequence1:2745219..2745758(-)	frameshift		2745473,2745515	WP_005082270.1	DUF5666 domain-containing protein	94.4	72.3	37.0
MGA_2626	LOCUS_26250	sequence1:2750717..2750965(+)	partial			WP_003894528.1	helix-turn-helix domain-containing protein	67.1	84.6	80.0
MGA_2728	LOCUS_27270	sequence1:2876353..2878413(+)	partial			WP_015909439.1	flagellar filament outer layer protein FlaA	39.9	30.6	28.5
MGA_2749	LOCUS_27480	sequence1:2901356..2901799(-)	partial			WP_011729369.1	hypothetical protein	99.3	62.4	58.2
MGA_2771	LOCUS_27700	sequence1:2929062..2929823(+)	partial			WP_011729147.1	hypothetical protein	39.1	56.0	34.1
MGA_2779	LOCUS_27780	sequence1:2939097..2940350(-)	partial			WP_003898837.1	bifunctional diguanylate cyclase/phosphodiesterase	82.5	55.1	53.6
MGA_2780	LOCUS_27790	sequence1:2940377..2941663(-)	partial			WP_010895651.1	bifunctional diguanylate cyclase/phosphodiesterase	81.3	59.4	28.2
MGA_2802	LOCUS_28010	sequence1:2965143..2966000(+)	partial			WP_003418336.1	cutinase family protein	72.3	77.5	63.1
MGA_2809	LOCUS_28080	sequence1:2971582..2971851(+)	partial			WP_014876959.1	hypothetical protein	78.7	50.3	43.2
MGA_2861	LOCUS_28600	sequence1:3026937..3029147(+)	partial			WP_010939704.1	EAL domain-containing protein	62.8	33.3	39.3
MGA_2867	LOCUS_28660	sequence1:3034336..3034686(-)	partial			WP_011727026.1	PAS and ANTAR domain-containing protein	91.4	44.9	33.0
MGA_2875	LOCUS_28740	sequence1:3044194..3044940(+)	partial			WP_011729147.1	hypothetical protein	36.7	42.5	38.9
MGA_2896	LOCUS_28950	sequence1:3063507..3064178(-)	partial			WP_011729070.1	hypothetical protein	31.8	42.3	48.6
MGA_2932	LOCUS_29310	sequence1:3099429..3099701(+)	partial			WP_011731351.1	Rieske (2Fe-2S) protein	97.8	63.8	60.2
MGA_2950	LOCUS_29490	sequence1:3118867..3119382(-)	frameshift,internal_stop_codon	3118867..3118869(-)	3118803,3118775	WP_011730721.1	transglycosylase family protein	57.9	21.6	44.3
MGA_2955	LOCUS_29540	sequence1:3122323..3123561(-)	frameshift		3122304,3122313,3122349,3122406	WP_011729136.1	hypothetical protein	58.5	46.4	42.0
MGA_3029	LOCUS_30280	sequence1:3202748..3203671(-)	frameshift,internal_stop_codon	3203682..3203684(-),3202721..3202723(-),3202748..3202750(-)	3203552,3203627,3202693	WP_011729208.1	alanine and proline-rich secreted protein Apa	70.0	64.0	64.2
MGA_3077	LOCUS_30760	sequence1:3252576..3253100(+)	partial			WP_003895129.1	hypothetical protein	43.7	55.9	55.3
MGA_3085	LOCUS_30840	sequence1:3259017..3259424(-)	partial			WP_043399813.1	DUF732 domain-containing protein	66.7	73.4	62.6
MGA_3091	LOCUS_30900	sequence1:3264260..3264862(+)	partial			WP_011729111.1	hypothetical protein	59.5	59.0	73.1
MGA_3098	LOCUS_30970	sequence1:3272659..3273528(-)	partial			WP_011727602.1	Ig-like domain-containing protein	86.5	62.6	60.8
MGA_3102	LOCUS_31010	sequence1:3277907..3278266(+)	partial			WP_005088224.1	PAS and ANTAR domain-containing protein	68.1	35.8	49.4
MGA_3107	LOCUS_31060	sequence1:3280881..3281201(+)	partial			WP_010887754.1	MerR family transcriptional regulator	90.6	70.8	54.6
MGA_3120	LOCUS_31190	sequence1:3291808..3292134(-)	partial			WP_003420544.1	lipoprotein LpqH	99.1	67.3	50.0
MGA_3126	LOCUS_31250	sequence1:3295447..3296232(+)	partial			WP_003896957.1	GAF and ANTAR domain-containing protein	73.9	81.9	35.4
MGA_3131	LOCUS_31300	sequence1:3301158..3302870(+)	partial			WP_013222257.1	FUSC family protein	77.7	72.2	24.7
MGA_3142	LOCUS_31410	sequence1:3312533..3313246(+)	partial			WP_010943304.1	TetR/AcrR family transcriptional regulator	41.8	45.1	37.6
MGA_3154	LOCUS_31530	sequence1:3325599..3329444(+)	partial			WP_027999870.1	tandem-95 repeat protein	36.8	12.1	32.2
MGA_3174	LOCUS_31730	sequence1:3345888..3346355(-)	partial			WP_001169716.1	RidA family protein	68.4	76.3	35.5
MGA_3175	LOCUS_31740	sequence1:3346398..3347153(-)	partial			WP_157868122.1	cyclase family protein	73.3	80.1	32.4
MGA_3176	LOCUS_31750	sequence1:3347193..3347996(-)	internal_stop_codon	3348048..3348050(-)		WP_003112429.1	cytosine permease	80.5	41.6	39.6
MGA_3177	LOCUS_31760	sequence1:3348048..3348758(-)	internal_stop_codon	3348048..3348050(-)		WP_011030292.1	cytosine permease	91.9	46.0	50.2
MGA_3178	LOCUS_31770	sequence1:3348748..3349995(-)	partial			WP_012582934.1	NADH-quinone oxidoreductase subunit NuoF	91.6	63.6	31.3
MGA_3221	LOCUS_32200	sequence1:3390654..3390986(-)	partial			WP_005081381.1	hypothetical protein	69.1	73.5	48.7
MGA_3226	LOCUS_32250	sequence1:3393192..3394166(-)	partial			WP_013227663.1	NAD(P)H-binding protein	68.2	76.2	27.9
MGA_3234	LOCUS_32330	sequence1:3403231..3403563(+)	partial			WP_124712897.1	site-specific integrase	53.6	14.6	50.8
MGA_3239	LOCUS_32380	sequence1:3407732..3408310(+)	partial			WP_209895261.1	IS481 family transposase	100.0	57.3	59.8
MGA_3259	LOCUS_32580	sequence1:3426950..3427543(-)	partial			WP_223495647.1	tetratricopeptide repeat protein	100.0	70.1	79.7
MGA_3264	LOCUS_32620	sequence1:3435854..3436273(-)	partial			WP_003895209.1	hypothetical protein	84.2	74.2	43.5
MGA_3283	LOCUS_32810	sequence1:3457557..3458099(-)	partial			WP_071997922.1	translation initiation factor IF-3	75.0	66.2	96.3
MGA_3300	LOCUS_32980	sequence1:3474627..3476462(-)	frameshift		3474682,3476509	WP_109789858.1	apolipoprotein N-acyltransferase	82.8	79.4	66.1
MGA_3314	LOCUS_33120	sequence1:3486628..3487389(-)	partial			WP_003895335.1	DUF4333 domain-containing protein	52.6	48.7	59.4
MGA_3336	LOCUS_33340	sequence1:3509485..3509856(+)	partial			WP_003895356.1	hypothetical protein	82.9	60.5	55.9
MGA_3344	LOCUS_33420	sequence1:3515406..3516005(+)	partial			WP_002468003.1	thermonuclease family protein	55.3	60.1	33.6
MGA_3346	LOCUS_33440	sequence1:3516628..3517359(+)	partial			WP_003415932.1	DUF4333 domain-containing protein	53.9	72.0	33.3
MGA_3356	LOCUS_33540	sequence1:3525527..3526795(-)	partial			WP_011974735.1	sensor domain-containing phosphodiesterase	55.7	25.5	31.0
MGA_3365	LOCUS_33630	sequence1:3534023..3535096(-)	partial			WP_011140301.1	D-alanine--D-alanine ligase	67.2	76.8	28.3
MGA_3366	LOCUS_33640	sequence1:3535098..3536480(-)	partial			WP_001093155.1	ATP-grasp domain-containing protein	64.6	75.2	26.9
MGA_3367	LOCUS_33650	sequence1:3536477..3537319(-)	partial			WP_010880979.1	class I SAM-dependent methyltransferase	64.3	81.6	41.7
MGA_3399	LOCUS_33970	sequence1:3568373..3569101(+)	partial			WP_049769928.1	polysaccharide deacetylase family protein	84.7	73.7	48.3
MGA_3403	LOCUS_34010	sequence1:3570787..3574809(-)	partial			WP_005079415.1	bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha	52.5	55.6	68.8
MGA_3417	LOCUS_34150	sequence1:3588857..3589381(+)	partial			WP_037896947.1	alpha/beta hydrolase	94.8	65.2	41.6
MGA_3433	LOCUS_34310	sequence1:3606036..3607133(-)	partial			WP_011729662.1	hypothetical protein	56.7	54.5	56.5
MGA_3454	LOCUS_34520	sequence1:3626025..3626690(-)	frameshift		3626725	WP_011729680.1	peptidase	99.5	83.0	53.6
MGA_3464	LOCUS_34620	sequence1:3636763..3637623(-)	partial			WP_005093292.1	membrane protein	34.3	34.0	71.4
MGA_3469	LOCUS_34670	sequence1:3642483..3643043(+)	partial			WP_003411415.1	membrane protein	76.3	62.2	49.7
MGA_3480	LOCUS_34780	sequence1:3651920..3653695(+)	partial			WP_011729702.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	54.3	55.2	81.4
MGA_3505	LOCUS_35030	sequence1:3680891..3681121(-)	partial			WP_005058264.1	CsbD family protein	63.2	61.5	70.8
MGA_3523	LOCUS_35210	sequence1:3699525..3700277(+)	frameshift		3700220	WP_008783747.1	IS30-like element ISBlo4 family transposase	82.8	52.0	37.1
MGA_3524	LOCUS_35220	sequence1:3700223..3700831(+)	frameshift		3700220	WP_008783747.1	IS30-like element ISBlo4 family transposase	94.6	44.9	57.1
MGA_3527	LOCUS_35250	sequence1:3702330..3703184(-)	partial			WP_011729746.1	LuxR C-terminal-related transcriptional regulator	97.9	53.7	46.1
MGA_3538	LOCUS_35360	sequence1:3715370..3715759(-)	partial			WP_003894938.1	DUF732 domain-containing protein	67.4	77.0	64.4
MGA_3556	LOCUS_35540	sequence1:3736825..3737709(-)	partial			WP_004191658.1	sugar kinase	69.4	57.5	28.4
MGA_3571	LOCUS_35690	sequence1:3750407..3750958(+)	partial			WP_011028179.1	hypothetical protein	71.6	53.3	38.1
MGA_3575	LOCUS_35730	sequence1:3753132..3755366(+)	partial			WP_011103760.1	ATP-binding protein	66.7	66.2	38.9
MGA_3579	LOCUS_35770	sequence1:3757598..3758944(+)	partial			WP_012583932.1	FGGY-family carbohydrate kinase	58.3	55.7	23.6
MGA_3582	LOCUS_35800	sequence1:3760876..3762012(+)	partial			WP_011731266.1	N-acetylmuramoyl-L-alanine amidase	95.0	67.0	65.6
MGA_3595	LOCUS_35930	sequence1:3775913..3776803(+)	partial			WP_011948299.1	extracellular solute-binding protein	81.1	38.0	37.9
MGA_3609	LOCUS_36070	sequence1:3789851..3792115(+)	partial			WP_011086495.1	VCBS domain-containing protein	80.2	15.4	20.5
MGA_3612	LOCUS_36100	sequence1:3794902..3795216(+)	frameshift		3795195,3795069	WP_076611786.1	IS3-like element ISMsm7 family transposase	55.8	15.0	77.6
MGA_3613	LOCUS_36110	sequence1:3795194..3795685(+)	frameshift		3795195,3795069,3795606	WP_076611786.1	IS3-like element ISMsm7 family transposase	84.0	35.5	81.0
MGA_3614	LOCUS_36120	sequence1:3795574..3796056(+)	frameshift		3795604	WP_076611786.1	IS3-like element ISMsm7 family transposase	96.9	39.9	81.4
MGA_3684	LOCUS_36820	sequence1:3867742..3868770(-)	frameshift		3868802	WP_038967157.1	acetamidase/formamidase family protein	97.7	52.8	43.9
MGA_3687	LOCUS_36850	sequence1:3870877..3871788(+)	partial			WP_011029226.1	LysR family transcriptional regulator	71.6	67.2	37.2
MGA_3694	LOCUS_36920	sequence1:3876048..3876416(-)	partial			WP_011729939.1	ribosome silencing factor	81.1	74.4	87.9
MGA_3703	LOCUS_37010	sequence1:3884801..3885766(+)	frameshift		3885625	WP_011731589.1	aconitase/3-isopropylmalate dehydratase large subunit family protein	85.7	65.2	74.2
MGA_3704	LOCUS_37020	sequence1:3885721..3886047(+)	frameshift		3885625	WP_011731589.1	aconitase/3-isopropylmalate dehydratase large subunit family protein	100.0	25.6	82.4
MGA_3718	LOCUS_37160	sequence1:3899381..3902053(-)	partial			WP_011729971.1	Rne/Rng family ribonuclease	76.4	66.4	71.9
MGA_3725	LOCUS_37230	sequence1:3910759..3911148(+)	partial			WP_011027722.1	helix-turn-helix domain-containing protein	73.6	60.5	54.7
MGA_3736	LOCUS_37340	sequence1:3922102..3922737(+)	frameshift		3922563	WP_011729985.1	Gfo/Idh/MocA family oxidoreductase	73.0	46.0	73.4
MGA_3737	LOCUS_37350	sequence1:3922659..3923108(+)	frameshift		3922563	WP_011729985.1	Gfo/Idh/MocA family oxidoreductase	99.3	44.2	79.1
MGA_3745	LOCUS_37430	sequence1:3929313..3929843(+)	partial			WP_011730617.1	hypothetical protein	69.3	69.0	37.4
MGA_3774	LOCUS_37720	sequence1:3960771..3961886(+)	partial			WP_005090114.1	hypothetical protein	19.4	71.3	52.8
MGA_3778	LOCUS_37760	sequence1:3963806..3964483(-)	frameshift		3964589	WP_209912946.1	IS481 family transposase	93.3	51.6	47.6
MGA_3783	LOCUS_37810	sequence1:3967916..3968734(+)	partial			WP_011730005.1	hypothetical protein	73.2	73.2	79.4
MGA_3828	LOCUS_38260	sequence1:4023633..4024340(+)	partial			WP_005113188.1	hypothetical protein	70.6	52.7	34.9
MGA_3831	LOCUS_38290	sequence1:4026137..4028635(+)	partial			WP_167338154.1	ABC transporter permease	34.0	33.9	27.8
MGA_3837	LOCUS_38350	sequence1:4034634..4035218(-)	partial			WP_003898743.1	HNH endonuclease signature motif containing protein	74.2	31.3	53.8
MGA_3838	LOCUS_38360	sequence1:4035463..4036461(-)	partial			WP_011731372.1	HNH endonuclease signature motif containing protein	81.3	48.5	42.2
MGA_3839	LOCUS_38370	sequence1:4036591..4036956(-)	partial			WP_003891979.1	DUF5994 family protein	86.0	64.0	39.3
MGA_3871	LOCUS_38690	sequence1:4075023..4075733(-)	partial			WP_223495730.1	MerR family transcriptional regulator	67.8	74.1	50.6
MGA_3885	LOCUS_38830	sequence1:4088083..4088709(-)	partial			WP_011730074.1	hypothetical protein	70.7	73.5	59.2
MGA_3886	LOCUS_38840	sequence1:4088706..4089719(-)	partial			WP_003407157.1	membrane protein	53.7	69.3	44.2
MGA_4063	LOCUS_40610	sequence1:4269072..4271207(-)	partial			WP_005110131.1	transcription termination factor Rho	56.8	61.0	86.4
MGA_4074	LOCUS_40720	sequence1:4282345..4283316(+)	partial			WP_011141312.1	hypothetical protein	51.4	53.7	39.1
MGA_4075	LOCUS_40730	sequence1:4283313..4283504(-)	frameshift		4283635,4283622	WP_003896372.1	LLM class flavin-dependent oxidoreductase	98.4	21.2	67.7
MGA_4076	LOCUS_40740	sequence1:4283501..4284115(-)	frameshift		4283635,4283598	WP_003896372.1	LLM class flavin-dependent oxidoreductase	71.6	49.8	78.1
MGA_4148	LOCUS_41460	sequence1:4369561..4370100(+)	partial			WP_011730291.1	DUF4190 domain-containing protein	52.0	59.7	51.6
MGA_4172	LOCUS_41700	sequence1:4391871..4393151(+)	partial			WP_029104277.1	ATP-binding protein	94.6	57.8	51.1
MGA_4176	LOCUS_41740	sequence1:4396104..4397357(-)	partial			WP_013229143.1	ricin-type beta-trefoil lectin domain protein	97.6	72.9	47.4
MGA_4194	LOCUS_41920	sequence1:4419604..4421427(+)	partial			WP_011731372.1	HNH endonuclease signature motif containing protein	43.8	48.5	42.6
MGA_4207	LOCUS_42050	sequence1:4431178..4432305(+)	partial			WP_011730350.1	hypothetical protein	37.9	43.4	88.7
MGA_4223	LOCUS_42210	sequence1:4445240..4446508(+)	frameshift		4445192,4445232	WP_013228759.1	L-arabinonate dehydratase	97.6	71.6	54.9
MGA_4267	LOCUS_42650	sequence1:4494007..4495161(+)	frameshift		4494585,4494851,4494655	WP_014878271.1	hypothetical protein	30.5	29.9	68.4
MGA_4303	LOCUS_43010	sequence1:4527696..4528211(-)	partial			WP_010908871.1	RDD family protein	92.4	63.5	58.9
MGA_4304	LOCUS_43020	sequence1:4528370..4529488(-)	partial			WP_011730429.1	hypothetical protein	66.9	68.4	35.4
MGA_4318	LOCUS_43160	sequence1:4542051..4542482(+)	partial			WP_011730439.1	lipoprotein LpqV	67.8	62.8	62.2
MGA_4335	LOCUS_43330	sequence1:4558020..4558880(+)	partial			WP_067118245.1	LLM class F420-dependent oxidoreductase	69.6	69.0	40.0
MGA_4339	LOCUS_43370	sequence1:4563314..4564498(+)	partial			WP_003973557.1	phosphotransferase	86.8	70.9	29.6
MGA_4346	LOCUS_43440	sequence1:4570370..4570660(-)	partial			WP_013229630.1	DUF3761 domain-containing protein	77.1	39.1	47.3
MGA_4347	LOCUS_43450	sequence1:4571137..4572378(-)	partial			WP_010937662.1	sensor domain-containing diguanylate cyclase	93.9	69.4	29.3
MGA_4348	LOCUS_43460	sequence1:4572681..4574072(-)	partial			WP_003900090.1	PPE family protein	61.6	58.2	41.6
MGA_4362	LOCUS_43600	sequence1:4588239..4588652(+)	frameshift		4588640,4588637	WP_011730522.1	iron uptake transporter deferrochelatase/peroxidase subunit	79.6	25.7	58.2
MGA_4363	LOCUS_43610	sequence1:4588774..4589568(+)	frameshift		4588640,4588637	WP_011730522.1	iron uptake transporter deferrochelatase/peroxidase subunit	100.0	61.7	81.8
MGA_4391	LOCUS_43890	sequence1:4620750..4621589(+)	internal_stop_codon	4621587..4621589(+)		WP_014878333.1	type IV toxin-antitoxin system AbiEi family antitoxin	91.4	81.5	45.9
MGA_4400	LOCUS_43980	sequence1:4627676..4628023(+)	partial			WP_011727905.1	STAS domain-containing protein	90.4	71.1	36.5
MGA_4412	LOCUS_44100	sequence1:4636255..4638063(-)	partial			WP_011731372.1	HNH endonuclease signature motif containing protein	49.0	53.0	41.4
MGA_4413	LOCUS_44110	sequence1:4638184..4640349(-)	partial			WP_013227688.1	SpoIIE family protein phosphatase	92.1	48.3	39.3
MGA_4414	LOCUS_44120	sequence1:4640729..4641007(+)	internal_stop_codon	4641005..4641007(+)		WP_003419762.1	STAS domain-containing protein	98.9	74.6	50.5
MGA_4423	LOCUS_44210	sequence1:4648661..4649170(-)	partial			WP_011027124.1	MarR family transcriptional regulator	62.1	68.9	37.1
MGA_4471	LOCUS_44690	sequence1:4698537..4699889(-)	partial			WP_011085728.1	phosphotransferase family protein	41.1	59.8	28.9
MGA_4509	LOCUS_45070	sequence1:4736203..4737069(-)	partial			WP_003404875.1	DUF5336 domain-containing protein	52.4	54.1	38.7
MGA_4519	LOCUS_45170	sequence1:4747822..4748085(+)	partial			WP_003404838.1	chorismate mutase	85.1	70.5	78.4
MGA_4535	LOCUS_45330	sequence1:4764963..4765682(+)	partial			WP_003114813.1	alpha/beta hydrolase	49.0	43.3	35.3
MGA_4557	LOCUS_45550	sequence1:4788946..4789368(-)	partial			WP_011727905.1	STAS domain-containing protein	66.4	66.2	42.6
MGA_4581	LOCUS_45790	sequence1:4810870..4812591(+)	partial			WP_011144393.1	potassium channel protein	48.5	39.6	29.5
MGA_4589	LOCUS_45870	sequence1:4819689..4820369(+)	partial			WP_003408551.1	hypothetical protein	73.9	69.1	59.5
MGA_4598	LOCUS_45960	sequence1:4830453..4831460(-)	partial			WP_011228691.1	phospholipase D-like domain-containing protein	89.0	70.3	34.9
MGA_4621	LOCUS_46190	sequence1:4853780..4854049(+)	partial			WP_003897101.1	DUF2530 domain-containing protein	66.3	66.3	57.6
MGA_4630	LOCUS_46280	sequence1:4861034..4862371(+)	frameshift,internal_stop_codon	4862369..4862371(+)	4862410	WP_011730721.1	transglycosylase family protein	30.3	28.4	74.6
MGA_4638	LOCUS_46360	sequence1:4868303..4873807(-)	partial			WP_011086345.1	VCBS domain-containing protein	94.2	50.1	26.4
MGA_4654	LOCUS_46520	sequence1:4889752..4890828(+)	partial			WP_012258396.1	ABC transporter substrate-binding protein	62.6	65.9	28.0
MGA_4662	LOCUS_46600	sequence1:4897006..4897155(-)	frameshift		4897336,4897290,4897160	WP_005110336.1	site-specific integrase	100.0	12.6	71.4
MGA_4663	LOCUS_46610	sequence1:4897460..4897690(-)	frameshift,internal_stop_codon	4897459..4897461(-)	4897704,4897954,4897338,4897292	WP_005110336.1	site-specific integrase	100.0	19.5	51.3
MGA_4680	LOCUS_46780	sequence1:4909965..4911803(+)	partial			WP_049744866.1	LCP family protein	93.3	74.7	68.6
MGA_4700	LOCUS_46980	sequence1:4927960..4928934(+)	partial			WP_042510669.1	NAD(P)H-binding protein	94.1	68.2	67.0
MGA_4751	LOCUS_47480	sequence1:4977652..4979157(+)	partial			WP_003408678.1	DUF4185 domain-containing protein	79.2	63.2	43.5
MGA_4776	LOCUS_47730	sequence1:5001054..5001530(+)	partial			WP_011730547.1	LpqN/LpqT family lipoprotein	93.0	61.8	48.0
MGA_4807	LOCUS_48040	sequence1:5033183..5033983(-)	partial			WP_011074212.1	polysaccharide deacetylase family protein	45.9	35.1	36.2
MGA_4819	LOCUS_48160	sequence1:5046271..5047539(-)	partial			WP_020404386.1	glycosyltransferase	56.6	33.9	29.7
MGA_4820	LOCUS_48170	sequence1:5047543..5048655(-)	partial			WP_001154382.1	DUF1972 domain-containing protein	70.8	70.6	26.4
MGA_4841	LOCUS_48380	sequence1:5067872..5068447(-)	frameshift		5068419	WP_003419327.1	DUF559 domain-containing protein	86.4	57.1	60.6
MGA_4842	LOCUS_48390	sequence1:5068342..5068785(-)	frameshift		5068419	WP_003900096.1	DUF559 domain-containing protein	85.7	43.6	57.1
MGA_4857	LOCUS_48540	sequence1:5084279..5084461(+)	internal_stop_codon	5084264..5084266(+)		WP_003417757.1	type II toxin-antitoxin system antitoxin RelJ	100.0	61.5	70.0
MGA_4980	LOCUS_49770	sequence1:5207911..5208954(+)	frameshift		5207863	WP_003419768.1	membrane protein	96.3	75.8	49.6
MGA_4986	LOCUS_49830	sequence1:5214137..5215021(+)	partial			WP_011731133.1	RDD family protein	74.8	71.7	64.5
MGA_4998	LOCUS_49950	sequence1:5224799..5225509(+)	partial			WP_011731137.1	PadR family transcriptional regulator	61.0	58.5	78.5
MGA_5043	LOCUS_50400	sequence1:5267070..5268926(-)	partial			WP_011731177.1	DNA polymerase III subunits gamma/tau	66.5	62.1	83.4
MGA_5045	LOCUS_50420	sequence1:5270643..5271461(+)	partial			WP_003420421.1	lipid uptake coordinator LucA	42.3	45.3	63.5
MGA_5056	LOCUS_50530	sequence1:5283509..5284015(+)	frameshift		5284288,5283883	WP_005114814.1	RND family transporter	67.9	12.0	75.4
MGA_5057	LOCUS_50540	sequence1:5283913..5284413(+)	frameshift		5284288,5283883	WP_005114814.1	RND family transporter	90.4	15.5	71.3
MGA_5058	LOCUS_50550	sequence1:5284371..5286377(+)	frameshift		5286285,5284287	WP_005114814.1	RND family transporter	99.1	69.4	76.1
MGA_5060	LOCUS_50570	sequence1:5286788..5286913(-)	partial			WP_029104330.1	ATP-dependent DNA ligase	95.1	11.1	74.4
MGA_5079	LOCUS_50760	sequence1:5308097..5308594(+)	partial			WP_003420544.1	lipoprotein LpqH	70.3	74.2	55.1
MGA_5088	LOCUS_50850	sequence1:5313928..5314557(-)	partial			WP_005076066.1	hypothetical protein	74.6	73.3	38.1
MGA_5092	LOCUS_50890	sequence1:5318170..5318850(-)	partial			WP_005076066.1	hypothetical protein	69.0	73.3	37.1
MGA_5093	LOCUS_50900	sequence1:5318860..5319348(-)	partial			WP_005076063.1	MspA family porin	99.4	65.8	52.8
MGA_5117	LOCUS_51140	sequence1:5340058..5340633(-)	frameshift		5340595,5340653	WP_005110030.1	hypothetical protein	45.5	33.9	34.5
MGA_5131	LOCUS_51280	sequence1:5350816..5351493(+)	frameshift		5350709	WP_209912946.1	IS481 family transposase	93.3	51.6	47.6
MGA_5144	LOCUS_51410	sequence1:5362060..5362545(-)	partial			WP_003418931.1	LppP/LprE family lipoprotein	86.3	64.1	44.1
MGA_5171	LOCUS_51680	sequence1:5394654..5396894(-)	partial			WP_003898492.1	HNH endonuclease signature motif containing protein	30.2	47.9	44.0
MGA_5176	LOCUS_51730	sequence1:5407265..5407747(-)	partial			WP_011731259.1	DUF732 domain-containing protein	65.6	60.5	59.0
MGA_5193	LOCUS_51900	sequence1:5425316..5426779(+)	partial			WP_011731269.1	septum formation family protein	74.5	75.2	63.5
MGA_5200	LOCUS_51970	sequence1:5431017..5431949(+)	partial			WP_235624060.1	LCP family protein	99.7	72.4	74.5
MGA_5211	LOCUS_52080	sequence1:5438971..5439330(-)	partial			WP_014878644.1	hypothetical protein	100.0	73.0	86.6
MGA_5213	LOCUS_52100	sequence1:5439535..5440008(-)	frameshift		5440259	WP_011731278.1	hypothetical protein	66.9	29.6	49.1
MGA_5240	LOCUS_52370	sequence1:5467007..5467261(+)	internal_stop_codon	5467259..5467261(+)		WP_003899074.1	DUF4262 domain-containing protein	92.9	36.3	53.8
MGA_5241	LOCUS_52380	sequence1:5467271..5467474(+)	internal_stop_codon	5467259..5467261(+)		WP_003899074.1	DUF4262 domain-containing protein	95.5	29.8	62.5
MGA_5268	LOCUS_52650	sequence1:5492380..5493453(+)	partial			WP_015909439.1	flagellar filament outer layer protein FlaA	90.2	36.1	27.4
MGA_5307	LOCUS_53040	sequence1:5528178..5528630(-)	partial			WP_014878772.1	MarR family winged helix-turn-helix transcriptional regulator	80.0	72.2	49.2
MGA_5311	LOCUS_53080	sequence1:5531212..5533581(-)	partial			WP_011726737.1	ATPase AAA	72.8	75.1	40.8
MGA_5339	LOCUS_53360	sequence1:5561762..5562379(+)	partial			WP_003405605.1	hypothetical protein	40.5	64.3	73.5
MGA_5347	LOCUS_53440	sequence1:5582016..5583836(-)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	45.4	36.8	51.8
MGA_5368	LOCUS_53650	sequence1:5606459..5606770(-)	partial			WP_162139516.1	hypothetical protein	83.5	34.3	36.0
MGA_5370	LOCUS_53670	sequence1:5608301..5609500(-)	partial			WP_011726641.1	MinD/ParA family protein	80.2	67.5	77.5
MGA_5381	LOCUS_53780	sequence1:5620921..5622237(+)	partial			WP_011726635.1	MinD/ParA family protein	73.7	69.3	72.8
MGA_5405	LOCUS_54020	sequence1:5643170..5643496(-)	partial			WP_011728757.1	helix-turn-helix domain-containing protein	82.4	57.7	47.8
MGA_5411	LOCUS_54080	sequence1:5648289..5648612(-)	frameshift,internal_stop_codon	5648609..5648611(-)	5648581	WP_011031561.1	helix-turn-helix transcriptional regulator	82.2	56.1	54.5
MGA_5415	LOCUS_54120	sequence1:5653702..5655150(+)	partial			WP_014876644.1	DUF3662 domain-containing protein	69.1	54.3	12.8
MGA_5431	LOCUS_54280	sequence1:5672941..5673279(-)	frameshift		5673489,5673404	WP_011726604.1	DNA replication protein DciA	100.0	57.7	80.4
MGA_5438	LOCUS_54350	sequence1:5679932..5680225(+)	partial			WP_003899766.1	membrane protein insertion efficiency factor YidD	84.5	68.3	69.5
MGA_5446	LOCUS_54430	sequence1:5686809..5687234(-)	partial			WP_011731639.1	thioredoxin	66.7	84.5	78.7
MGA_5447	LOCUS_54440	sequence1:5687277..5688221(-)	partial			WP_011731638.1	thioredoxin-disulfide reductase	68.2	68.8	82.2
MGA_5450	LOCUS_54470	sequence1:5689000..5689626(-)	partial			WP_005087658.1	RNA polymerase sigma factor SigM	73.6	78.9	67.3
MGA_5451	LOCUS_54480	sequence1:5689685..5690005(-)	frameshift		5690096,5690090	WP_011731634.1	murein biosynthesis integral membrane protein MurJ	100.0	8.7	57.5
MGA_5452	LOCUS_54490	sequence1:5690088..5690957(-)	frameshift		5691233,5690089,5690966,5690095	WP_011731634.1	murein biosynthesis integral membrane protein MurJ	99.3	23.8	63.1
MGA_5453	LOCUS_54500	sequence1:5690948..5693260(-)	frameshift		5691232,5691337,5690965	WP_011731634.1	murein biosynthesis integral membrane protein MurJ	79.5	51.0	67.5
MGA_5454	LOCUS_54510	sequence1:5693257..5693838(-)	frameshift		5693567,5693703	WP_003900781.1	hypothetical protein	95.9	23.4	57.8
MGA_5455	LOCUS_54520	sequence1:5693961..5694200(+)	frameshift,internal_stop_codon	5693931..5693933(+)	5694158	WP_010909044.1	hypothetical protein	83.5	25.5	59.1
MGA_5456	LOCUS_54530	sequence1:5694197..5694388(+)	frameshift,internal_stop_codon	5693931..5693933(+)	5694152	WP_011731640.1	hypothetical protein	93.7	23.6	76.3
MGA_5457	LOCUS_54540	sequence1:5694533..5695582(-)	frameshift		5694778,5694423	WP_003898354.1	N-acetylmuramoyl-L-alanine amidase	77.1	67.9	84.8
MGA_5459	LOCUS_54560	sequence1:5696531..5697346(-)	frameshift		5696347,5696668	WP_011731638.1	thioredoxin-disulfide reductase	38.0	33.4	80.8
MGA_5462	LOCUS_54590	sequence1:5697820..5698158(-)	frameshift		5698190	WP_005087658.1	RNA polymerase sigma factor SigM	94.6	54.6	63.2
MGA_5463	LOCUS_54600	sequence1:5698155..5698427(-)	frameshift		5698190	WP_003400144.1	RNA polymerase sigma factor SigM	80.0	35.2	56.9
MGA_5464	LOCUS_54610	sequence1:5698447..5698986(-)	frameshift		5699099,5698987	WP_011731634.1	murein biosynthesis integral membrane protein MurJ	100.0	15.0	56.3
MGA_5465	LOCUS_54620	sequence1:5698884..5701439(-)	frameshift		5698992,5700467,5701446,5700524,5699101	WP_011731634.1	murein biosynthesis integral membrane protein MurJ	91.2	65.8	65.5
MGA_5466	LOCUS_54630	sequence1:5702015..5702233(-)	frameshift		5702244	WP_014878804.1	hypothetical protein	91.7	7.5	77.3
MGA_5467	LOCUS_54640	sequence1:5703197..5703868(-)	frameshift		5703252,5703927	WP_014878804.1	hypothetical protein	90.6	25.0	72.4
MGA_5468	LOCUS_54650	sequence1:5703823..5704401(-)	frameshift		5703927	WP_003900781.1	hypothetical protein	71.4	17.2	60.1
MGA_5469	LOCUS_54660	sequence1:5704398..5704979(-)	partial			WP_011731632.1	NUDIX hydrolase	100.0	64.6	89.1
MGA_5470	LOCUS_54670	sequence1:5705512..5706822(+)	frameshift		5706302,5705509,5706262,5706503	WP_011731631.1	CCA tRNA nucleotidyltransferase	72.2	66.0	79.2
MGA_5476	LOCUS_54730	sequence1:5710494..5711387(-)	partial			WP_010907480.1	LpqN/LpqT family lipoprotein	67.0	74.1	60.4
MGA_5477	LOCUS_54740	sequence1:5711590..5711889(+)	frameshift		5711971,5711907,5711844,5712013	WP_010907481.1	leucine--tRNA ligase	84.8	8.7	64.7
MGA_5483	LOCUS_54800	sequence2:3064..3303(+)	frameshift		3267,3013,3062	WP_010774229.1	DEAD/DEAH box helicase family protein	78.5	2.0	48.4
MGA_5484	LOCUS_54810	sequence2:3276..5195(+)	frameshift		3273,3062	WP_010774229.1	DEAD/DEAH box helicase family protein	59.5	11.3	33.5
MGA_5485	LOCUS_54820	sequence2:5192..8260(+)	partial			WP_011860792.1	DEAD/DEAH box helicase family protein	74.3	25.5	33.8
MGA_5496	LOCUS_54930	sequence2:16519..18654(-)	frameshift		17483,16645,18662,17519	WP_010950644.1	DEAD/DEAH box helicase	94.1	42.5	50.1
MGA_5497	LOCUS_54940	sequence2:18600..20531(-)	frameshift		18664,20485	WP_010950644.1	DEAD/DEAH box helicase	94.7	37.0	60.6
MGA_5498	LOCUS_54950	sequence2:20420..21028(-)	frameshift		20483,21017,21203	WP_003916920.1	DEAD/DEAH box helicase family protein	98.5	37.9	61.0
MGA_5499	LOCUS_54960	sequence2:20923..21168(-)	frameshift		21017,21203	WP_010950644.1	DEAD/DEAH box helicase	70.4	3.5	47.4
MGA_5504	LOCUS_55010	sequence2:25522..26031(-)	partial			WP_003899112.1	CAP domain-containing protein	87.6	67.0	64.2
MGA_5520	LOCUS_55170	sequence2:44620..45063(+)	partial			WP_048061298.1	Zn-ribbon domain-containing OB-fold protein	68.7	76.5	31.4
MGA_5571	LOCUS_55680	sequence2:101404..101598(+)	partial			WP_003896201.1	ferredoxin	70.3	71.4	64.4
MGA_5574	LOCUS_55710	sequence2:103864..105006(+)	partial			WP_011730097.1	acyl-CoA dehydrogenase family protein	72.6	70.3	63.4
MGA_5594	LOCUS_55910	sequence2:124256..125449(-)	partial			WP_011339587.1	RES domain-containing protein	57.4	48.4	34.0
MGA_5595	LOCUS_55920	sequence2:125491..126423(-)	frameshift,internal_stop_codon	126368..126370(-)	126310	WP_011730517.1	MPT63 family protein	52.3	47.1	57.7
MGA_5611	LOCUS_56080	sequence2:135897..141752(+)	partial			WP_012296243.1	MobF family relaxase	43.4	70.7	28.5
MGA_5612	LOCUS_56090	sequence2:141749..142543(-)	partial			WP_011035363.1	non-homologous end-joining DNA ligase	94.3	24.5	37.3
MGA_5617	LOCUS_56140	sequence2:148375..149160(+)	frameshift		148986	WP_005095711.1	FAD/NAD(P)-binding oxidoreductase	75.9	50.9	60.6
MGA_5618	LOCUS_56150	sequence2:149130..149561(+)	frameshift		148992	WP_005095711.1	FAD/NAD(P)-binding oxidoreductase	94.4	34.7	62.2
MGA_5623	LOCUS_56200	sequence2:155087..156682(-)	partial			WP_003410735.1	serine/threonine protein kinase PknJ	49.0	44.1	55.9
MGA_5638	LOCUS_56350	sequence2:171362..173029(-)	partial			WP_003408854.1	type VII secretion system ESX-5 serine protease mycosin MycP5	56.6	54.4	48.6
MGA_5640	LOCUS_56370	sequence2:174540..176363(-)	partial			WP_005072184.1	MinD/ParA family protein	56.7	84.1	42.4
MGA_5657	LOCUS_56540	sequence2:193261..195018(-)	partial			WP_015287743.1	DUF4226 domain-containing protein	18.3	22.5	41.1
MGA_5663	LOCUS_56600	sequence2:200817..201728(+)	partial			WP_193486832.1	ParB/RepB/Spo0J family partition protein	86.1	73.5	31.8
MGA_5665	LOCUS_56620	sequence2:202293..203432(+)	partial			WP_003917259.1	hypothetical protein	36.1	42.7	44.5
MGA_5666	LOCUS_56630	sequence2:203499..204533(+)	partial			WP_003400393.1	C40 family peptidase	34.3	39.5	51.7
MGA_5667	LOCUS_56640	sequence2:204592..205698(+)	partial			WP_011729282.1	hypothetical protein	32.9	56.0	50.4
MGA_5676	LOCUS_56730	sequence2:210156..212069(+)	frameshift		210136,210130,211958,212103	WP_010974882.1	lactate dehydrogenase	94.2	32.7	30.5
MGA_5677	LOCUS_56740	sequence2:212115..214232(+)	frameshift		212094,211958	WP_011860792.1	DEAD/DEAH box helicase family protein	89.5	21.2	33.2
MGA_5689	LOCUS_56860	sequence2:222963..223556(-)	frameshift		223630	WP_010950644.1	DEAD/DEAH box helicase	98.5	12.0	60.8
MGA_5690	LOCUS_56870	sequence2:224247..224876(-)	frameshift		224242,223990,224254,224026,224926	WP_010950644.1	DEAD/DEAH box helicase	98.6	13.0	57.7
MGA_5691	LOCUS_56880	sequence2:224876..225466(-)	frameshift		225526,224923,225541,225574	WP_010950644.1	DEAD/DEAH box helicase	91.8	11.2	64.4
MGA_5692	LOCUS_56890	sequence2:225448..226611(-)	frameshift		225540,225573,225525,226729,225726	WP_010950644.1	DEAD/DEAH box helicase	71.3	17.4	61.6
MGA_5693	LOCUS_56900	sequence2:226550..227755(-)	frameshift		226729	WP_003916920.1	DEAD/DEAH box helicase family protein	84.5	66.0	63.8