# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:1..688(+)	frameshift		256,258,259,260,212,215,792,793,154,791,157,798,799,797,675,804,805,807,682,683,686,181,310	WP_003916655.1	PPE domain-containing protein	99.6	7.3	45.7
MGA_3	LOCUS_00030	sequence1:1548..2372(+)	frameshift		2561,2563,2276,1579,1582,1591,1594,1597	WP_122524938.1	PPE domain-containing protein	78.8	6.5	73.4
MGA_4	LOCUS_00040	sequence1:3198..3452(+)	partial			WP_003899285.1	phospholipase C	63.1	10.4	62.3
MGA_10	LOCUS_00100	sequence1:8069..8371(+)	frameshift		8347,8476	WP_003900505.1	PPE family protein	93.0	23.8	61.3
MGA_13	LOCUS_00130	sequence1:9385..9696(+)	partial			WP_003404760.1	IS607-like element IS1535 family transposase	71.8	38.3	82.4
MGA_15	LOCUS_00150	sequence1:10169..11566(-)	frameshift		11554,11555,10249,11564,10348,11534,11181,10254,10332	WP_010950556.1	PPE family protein	91.0	57.1	39.8
MGA_16	LOCUS_00160	sequence1:11493..12260(-)	frameshift		11546,11540,11564,11534	WP_010886120.1	PPE family protein	85.9	33.6	49.1
MGA_17	LOCUS_00170	sequence1:12805..14142(+)	partial			WP_003113577.1	alpha/beta fold hydrolase	57.5	78.9	32.1
MGA_18	LOCUS_00180	sequence1:14478..15884(+)	partial			WP_003911027.1	PE family protein	24.6	26.2	62.6
MGA_21	LOCUS_00210	sequence1:21574..24882(-)	partial			WP_015445472.1	AAA family ATPase	63.6	63.0	27.6
MGA_24	LOCUS_00240	sequence1:27274..27600(+)	partial			WP_011730080.1	thiolase family protein	47.2	13.6	69.2
MGA_25	LOCUS_00250	sequence1:27756..29405(-)	frameshift,internal_stop_codon	27756..27758(-)	27728,27691	WP_010886165.1	PE family protein	24.4	8.7	54.5
MGA_37	LOCUS_00370	sequence1:39862..41712(-)	frameshift		41881,41710,41711	WP_010886091.1	PE family protein	19.5	19.8	74.2
MGA_39	LOCUS_00390	sequence1:44303..44758(+)	frameshift		44240	WP_014878423.1	glutathione S-transferase C-terminal domain-containing protein	94.7	42.1	81.1
MGA_62	LOCUS_00610	sequence1:79441..79617(-)	partial			WP_003404673.1	DUF2630 family protein	89.7	59.8	55.8
MGA_92	LOCUS_00910	sequence1:109404..109754(+)	partial			WP_003410070.1	ATP-binding protein	94.0	24.7	74.3
MGA_98	LOCUS_00970	sequence1:113930..114325(-)	partial			WP_010950590.1	PPE family protein	97.7	12.2	66.4
MGA_103	LOCUS_01020	sequence1:116840..118687(-)	frameshift,internal_stop_codon	117331..117333(-),117748..117750(-),116611..116613(-),117472..117474(-),117568..117570(-),117478..117480(-),116766..116768(-),116764..116766(-),117373..117375(-),117403..117405(-)	117568,117378,116613,116615,116616,116745,116746,117321,116812,116618,116625,117841,116567,116568,116570,116571,116766,116830,116767,116833,116769,116841,116842,116844,116845,117691	WP_010886126.1	PPE family protein	99.8	58.4	65.4
MGA_117	LOCUS_01160	sequence1:134141..134407(+)	partial			WP_010950565.1	DUF2742 domain-containing protein	100.0	66.7	65.9
MGA_118	LOCUS_01170	sequence1:134409..135671(+)	frameshift		135476	WP_164921306.1	ATP-binding protein	81.4	64.0	33.1
MGA_124	LOCUS_01230	sequence1:139805..140050(-)	partial			WP_003904648.1	hypothetical protein	90.1	55.1	60.0
MGA_127	LOCUS_01260	sequence1:140506..140775(+)	partial			WP_003898977.1	HNH endonuclease signature motif containing protein	85.4	16.7	89.5
MGA_132	LOCUS_01310	sequence1:147804..148724(-)	partial			WP_011730613.1	diiron oxygenase	94.8	70.7	76.9
MGA_133	LOCUS_01320	sequence1:149156..150832(+)	partial			WP_010886154.1	PE family protein	21.5	22.9	55.0
MGA_138	LOCUS_01370	sequence1:155425..155697(-)	partial			WP_003404838.1	chorismate mutase	86.7	74.3	76.9
MGA_155	LOCUS_01540	sequence1:175815..176159(-)	frameshift		176151	WP_003404920.1	hypothetical protein	97.4	79.9	82.9
MGA_165	LOCUS_01640	sequence1:188023..191253(+)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	45.4	53.0	61.8
MGA_173	LOCUS_01720	sequence1:197217..197534(-)	partial			WP_003405142.1	zinc ribbon domain-containing protein	61.0	58.2	87.5
MGA_182	LOCUS_01810	sequence1:205572..206876(+)	partial			WP_015775718.1	hypothetical protein	70.3	70.9	36.7
MGA_202	LOCUS_02010	sequence1:223055..224290(-)	internal_stop_codon	223055..223057(-)		WP_003910253.1	hypothetical protein	36.3	35.6	36.1
MGA_216	LOCUS_02150	sequence1:239101..239562(-)	partial			WP_010907629.1	LpqN/LpqT family lipoprotein	100.0	70.2	76.5
MGA_240	LOCUS_02390	sequence1:267690..268655(+)	partial			WP_002069043.1	adenylate/guanylate cyclase domain-containing protein	55.5	30.1	23.9
MGA_250	LOCUS_02490	sequence1:276860..279472(+)	partial			WP_000126413.1	S8 family peptidase	67.2	67.4	25.1
MGA_251	LOCUS_02500	sequence1:279670..280512(+)	partial			WP_094482190.1	hypothetical protein	82.1	47.1	36.5
MGA_253	LOCUS_02520	sequence1:281344..282462(+)	frameshift		282297	WP_003917061.1	DDE-type integrase/transposase/recombinase	86.8	69.5	86.2
MGA_254	LOCUS_02530	sequence1:282468..282752(+)	frameshift		282297	WP_163760282.1	DDE-type integrase/transposase/recombinase	100.0	20.1	85.1
MGA_255	LOCUS_02540	sequence1:282749..283387(+)	frameshift		283297	WP_003414201.1	ExeA family protein	86.3	67.8	90.7
MGA_256	LOCUS_02550	sequence1:283329..283562(+)	frameshift		283297	WP_003414201.1	ExeA family protein	100.0	28.5	70.1
MGA_258	LOCUS_02570	sequence1:285821..285985(-)	partial			WP_167470730.1	integrase core domain-containing protein	96.3	51.0	59.6
MGA_260	LOCUS_02590	sequence1:286153..286821(-)	internal_stop_codon	286873..286875(-)		WP_011727590.1	IS1380-like element ISMsm11 family transposase	58.6	27.8	75.4
MGA_261	LOCUS_02600	sequence1:286873..287595(-)	internal_stop_codon	286873..286875(-)		WP_011731432.1	IS1380-like element ISMsm10 family transposase	68.3	35.1	57.3
MGA_275	LOCUS_02740	sequence1:301430..301837(+)	frameshift,internal_stop_codon	301952..301954(+)	302098,301819	WP_003405722.1	hypothetical protein	95.6	45.6	79.8
MGA_276	LOCUS_02750	sequence1:302112..302282(+)	frameshift,internal_stop_codon	301951..301953(+)	302097	WP_003405722.1	hypothetical protein	98.2	19.4	83.6
MGA_281	LOCUS_02800	sequence1:307445..308152(+)	partial			WP_003405732.1	RDD family protein	71.1	69.6	83.8
MGA_290	LOCUS_02890	sequence1:315772..316314(+)	partial			WP_010886116.1	PE family protein	62.2	25.7	45.2
MGA_291	LOCUS_02900	sequence1:316476..317270(+)	frameshift		316387,316287	WP_003409992.1	cellulose-binding protein	39.4	74.6	43.4
MGA_292	LOCUS_02910	sequence1:317267..317569(+)	partial			WP_003900273.1	glycosyl hydrolase family 12	100.0	66.2	77.0
MGA_293	LOCUS_02920	sequence1:317892..319754(+)	frameshift		319585,319304,319530,319563,319629,319184,319473,319283,319608,319609,319262	WP_010950491.1	PE family protein	19.7	14.4	67.2
MGA_298	LOCUS_02970	sequence1:323106..326717(+)	partial			WP_010950491.1	PE family protein	10.1	14.4	55.7
MGA_319	LOCUS_03180	sequence1:346423..346911(+)	partial			WP_003898733.1	hypothetical protein	75.3	52.6	88.5
MGA_321	LOCUS_03200	sequence1:347388..349166(-)	partial			WP_010950605.1	PPE family protein	77.7	66.6	50.1
MGA_322	LOCUS_03210	sequence1:349286..349981(-)	frameshift		349986	WP_003898734.1	hypothetical protein	99.6	80.4	87.4
MGA_323	LOCUS_03220	sequence1:350014..350223(+)	partial			WP_003896614.1	hypothetical protein	50.7	63.6	74.3
MGA_325	LOCUS_03240	sequence1:351092..351328(+)	partial			WP_003898735.1	glucose-6-phosphate dehydrogenase	96.2	16.1	82.7
MGA_328	LOCUS_03270	sequence1:353959..354213(+)	frameshift		354261,354183	WP_003404761.1	IS607 family element RNA-guided endonuclease TnpB	97.6	14.9	67.1
MGA_329	LOCUS_03280	sequence1:354236..355609(+)	frameshift		354261,354183	WP_003404761.1	IS607 family element RNA-guided endonuclease TnpB	98.5	81.8	76.9
MGA_336	LOCUS_03350	sequence1:361632..362177(+)	partial			WP_003898977.1	HNH endonuclease signature motif containing protein	67.4	26.9	49.2
MGA_351	LOCUS_03500	sequence1:376433..379588(-)	partial			WP_003405919.1	PPE family protein	40.6	70.9	46.2
MGA_365	LOCUS_03640	sequence1:391919..392440(-)	frameshift		392473,392443	WP_009936776.1	DUF1697 domain-containing protein	91.9	76.1	72.2
MGA_375	LOCUS_03740	sequence1:397790..398644(+)	frameshift		398530,398518	WP_158226985.1	IS30 family transposase	59.5	55.8	42.4
MGA_376	LOCUS_03750	sequence1:398628..399164(+)	frameshift		398518,398527	WP_008783747.1	IS30-like element ISBlo4 family transposase	93.8	39.5	64.7
MGA_379	LOCUS_03780	sequence1:403186..404340(+)	partial			WP_010950541.1	PE family protein	28.4	24.3	46.4
MGA_385	LOCUS_03840	sequence1:409865..411313(+)	partial			WP_003409992.1	cellulose-binding protein	19.9	67.6	51.0
MGA_401	LOCUS_04000	sequence1:430204..430674(+)	frameshift		430588,430252	WP_003406207.1	RNA polymerase sigma factor SigI	72.4	39.0	84.1
MGA_402	LOCUS_04010	sequence1:430652..431104(+)	partial			WP_003406212.1	alpha/beta fold hydrolase	63.3	38.0	73.0
MGA_406	LOCUS_04050	sequence1:434584..435798(-)	frameshift		435720,435185,435291,435684	WP_010950436.1	PE family protein	10.6	5.4	72.1
MGA_408	LOCUS_04070	sequence1:435972..437153(-)	frameshift,internal_stop_codon	436622..436624(-)	436225,436322,436258,436261,436231,436327,436264,436426,436267,436268,436492,436525,436235,436400,436598	WP_010886084.1	PE family protein	33.3	17.6	42.0
MGA_438	LOCUS_04370	sequence1:469446..470039(-)	partial			WP_003406288.1	DUF4190 domain-containing protein	45.7	45.5	73.3
MGA_452	LOCUS_04510	sequence1:486700..487482(+)	frameshift		487386	WP_003898791.1	MFS transporter	88.1	39.6	69.0
MGA_453	LOCUS_04520	sequence1:487410..488519(+)	frameshift		487386,488319	WP_003406326.1	MFS transporter	82.1	50.1	63.4
MGA_454	LOCUS_04530	sequence1:488599..488880(-)	frameshift		489060,489047	WP_003406334.1	LppP/LprE family lipoprotein	100.0	46.0	87.1
MGA_462	LOCUS_04610	sequence1:496065..496265(-)	frameshift		496070	WP_003406352.1	cytochrome P450 Cyp130	98.5	16.0	87.7
MGA_470	LOCUS_04690	sequence1:504453..505046(+)	frameshift		504436	WP_003406375.1	transcriptional regulator AbmR	97.5	83.2	84.4
MGA_476	LOCUS_04750	sequence1:511470..513254(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	69.5	67.7	71.2
MGA_483	LOCUS_04820	sequence1:519657..520637(+)	frameshift,internal_stop_codon	519791..519793(+),519731..519733(+)	519651,519910,519991,520343,519642,520349	WP_010886165.1	PE family protein	40.5	8.6	55.3
MGA_484	LOCUS_04830	sequence1:520634..521314(+)	partial			WP_011031088.1	glycoside hydrolase family 16 protein	100.0	48.3	53.9
MGA_492	LOCUS_04910	sequence1:527839..530058(+)	partial			WP_003911027.1	PE family protein	16.0	26.9	59.3
MGA_499	LOCUS_04980	sequence1:537058..537438(+)	frameshift,internal_stop_codon	537437..537439(+)	537034	WP_011730246.1	alpha/beta fold hydrolase	96.8	29.3	63.9
MGA_500	LOCUS_04990	sequence1:537490..538005(+)	internal_stop_codon	537436..537438(+)		WP_011730246.1	alpha/beta fold hydrolase	90.6	38.4	49.4
MGA_506	LOCUS_05050	sequence1:543906..545333(+)	partial			WP_003911027.1	PE family protein	15.8	16.2	69.3
MGA_512	LOCUS_05110	sequence1:550439..552232(-)	partial			WP_011144393.1	potassium channel protein	85.3	73.6	27.8
MGA_517	LOCUS_05160	sequence1:556902..557561(+)	partial			WP_013227762.1	winged helix-turn-helix transcriptional regulator	74.0	75.6	47.9
MGA_518	LOCUS_05170	sequence1:557674..560415(-)	partial			WP_010886125.1	PE domain-containing protein	34.7	31.6	67.4
MGA_549	LOCUS_05480	sequence1:597525..599339(-)	partial			WP_010886112.1	PE family protein	19.5	19.6	58.5
MGA_550	LOCUS_05490	sequence1:599665..599898(+)	internal_stop_codon	599896..599898(+)		WP_003406887.1	co-chaperone YbbN	100.0	25.3	84.4
MGA_551	LOCUS_05500	sequence1:599932..600411(+)	internal_stop_codon	599896..599898(+)		WP_003406887.1	co-chaperone YbbN	100.0	52.3	85.5
MGA_552	LOCUS_05510	sequence1:600455..601954(-)	partial			WP_010950524.1	PE family protein	24.0	19.9	48.3
MGA_572	LOCUS_05710	sequence1:621720..621860(+)	partial			WP_003895326.1	phosphotransferase	97.8	12.7	66.7
MGA_573	LOCUS_05720	sequence1:621877..622194(-)	partial			WP_011728221.1	acyl-CoA dehydrogenase family protein	61.9	16.4	67.7
MGA_575	LOCUS_05740	sequence1:623230..623514(+)	partial			WP_003893583.1	GntR family transcriptional regulator	91.5	38.7	72.1
MGA_590	LOCUS_05890	sequence1:635476..636312(-)	partial			WP_206612254.1	IS30 family transposase	84.9	49.9	35.1
MGA_591	LOCUS_05900	sequence1:636680..636970(+)	partial			WP_010950644.1	DEAD/DEAH box helicase	69.8	4.2	85.1
MGA_603	LOCUS_06020	sequence1:656595..656822(+)	partial			WP_003412942.1	DUF3618 domain-containing protein	68.0	68.0	90.2
MGA_607	LOCUS_06060	sequence1:659916..660329(-)	frameshift		660453	WP_164689163.1	IS3 family transposase	96.4	39.3	59.8
MGA_608	LOCUS_06070	sequence1:660564..661352(-)	frameshift		660977,660689,660965,660458,660941	WP_109559953.1	IS3 family transposase	75.2	42.5	35.7
MGA_668	LOCUS_06670	sequence1:726641..727150(-)	frameshift		727203	WP_010950597.1	PE family protein	47.3	13.0	56.8
MGA_684	LOCUS_06830	sequence1:743696..744688(+)	frameshift		743693	WP_029104282.1	HNH endonuclease signature motif containing protein	99.1	68.6	49.1
MGA_694	LOCUS_06930	sequence1:754878..755537(+)	internal_stop_codon	755535..755537(+)		WP_003415107.1	DNA-binding protein HupB	48.9	50.0	95.3
MGA_738	LOCUS_07370	sequence1:835264..837831(-)	partial			WP_010886158.1	phthiocerol type I polyketide synthase PpsA	99.6	46.4	69.7
MGA_740	LOCUS_07390	sequence1:838656..840824(-)	frameshift		838955	WP_010886158.1	phthiocerol type I polyketide synthase PpsA	84.5	32.5	84.3
MGA_742	LOCUS_07410	sequence1:843264..843590(-)	partial			WP_003414828.1	thioesterase TesA	99.1	41.0	72.0
MGA_792	LOCUS_07910	sequence1:903878..905401(-)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	55.6	30.1	40.0
MGA_802	LOCUS_08010	sequence1:915622..917040(-)	partial			WP_010950666.1	PE family protein	30.9	29.0	51.4
MGA_822	LOCUS_08210	sequence1:938396..939967(-)	partial			WP_010886067.1	PE family protein	22.6	24.0	51.7
MGA_823	LOCUS_08220	sequence1:940266..942089(-)	partial			WP_010886067.1	PE family protein	19.4	24.0	51.7
MGA_870	LOCUS_08690	sequence1:1002453..1002779(+)	partial			WP_003409188.1	DUF732 domain-containing protein	70.4	63.6	38.2
MGA_876	LOCUS_08750	sequence1:1007394..1008146(+)	partial			WP_172591903.1	family 2A encapsulin nanocompartment cargo protein cysteine desulfurase	84.4	33.3	86.7
MGA_879	LOCUS_08780	sequence1:1011512..1012000(-)	frameshift		1012247	WP_011205569.1	bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha	96.9	11.1	63.1
MGA_880	LOCUS_08790	sequence1:1012116..1012697(-)	frameshift		1012247	WP_005079415.1	bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha	59.6	9.1	57.4
MGA_887	LOCUS_08860	sequence1:1020104..1020289(-)	partial			WP_003411963.1	Lrp/AsnC family transcriptional regulator	100.0	41.2	85.2
MGA_899	LOCUS_08980	sequence1:1031199..1036451(-)	partial			WP_010950632.1	PPE family protein	66.5	58.5	46.6
MGA_948	LOCUS_09470	sequence1:1087506..1088555(+)	frameshift		1088432	WP_029104282.1	HNH endonuclease signature motif containing protein	78.8	57.5	43.1
MGA_949	LOCUS_09480	sequence1:1088470..1089000(+)	frameshift		1088432	WP_029104282.1	HNH endonuclease signature motif containing protein	99.4	36.8	58.3
MGA_951	LOCUS_09500	sequence1:1089732..1092482(+)	partial			WP_011122418.1	VIT domain-containing protein	60.8	74.1	31.3
MGA_996	LOCUS_09950	sequence1:1138744..1139196(-)	partial			WP_011727319.1	nitroreductase family deazaflavin-dependent oxidoreductase	45.3	54.0	41.2
MGA_1002	LOCUS_10010	sequence1:1144590..1144904(+)	partial			WP_204250320.1	dihydrodipicolinate reductase	58.7	17.4	80.6
MGA_1031	LOCUS_10300	sequence1:1173981..1174709(-)	frameshift,internal_stop_codon	1174829..1174831(-)	1174741	WP_003411507.1	HAD family hydrolase	92.1	77.7	73.5
MGA_1062	LOCUS_10610	sequence1:1212509..1213675(+)	frameshift		1212479	WP_000561483.1	group II intron reverse transcriptase/maturase	97.4	84.5	43.0
MGA_1068	LOCUS_10670	sequence1:1218839..1219348(-)	partial			WP_003411425.1	DUF3043 domain-containing protein	97.6	69.9	72.7
MGA_1085	LOCUS_10840	sequence1:1236167..1236421(+)	partial			WP_005074915.1	hypothetical protein	67.9	78.1	73.7
MGA_1133	LOCUS_11320	sequence1:1287184..1287486(+)	partial			WP_003411107.1	hypothetical protein	100.0	74.5	87.3
MGA_1144	LOCUS_11430	sequence1:1295930..1296208(-)	frameshift		1295953	WP_011729015.1	aromatic acid/H+ symport family MFS transporter	90.2	19.2	63.9
MGA_1155	LOCUS_11540	sequence1:1307046..1307357(-)	frameshift,internal_stop_codon	1307070..1307072(-)	1307072	WP_010950346.1	PE family protein	89.3	17.1	53.3
MGA_1165	LOCUS_11640	sequence1:1316501..1318030(+)	partial			WP_003410786.1	PE family protein	29.7	30.5	60.9
MGA_1178	LOCUS_11770	sequence1:1331289..1331777(+)	partial			WP_158889249.1	IS982 family transposase	69.1	37.2	50.0
MGA_1184	LOCUS_11830	sequence1:1336906..1337673(-)	frameshift,internal_stop_codon	1336787..1336789(-)	1336864,1337658	WP_010950655.1	DUF5631 domain-containing protein	85.9	30.4	82.2
MGA_1188	LOCUS_11870	sequence1:1339639..1339836(-)	partial			WP_010950655.1	DUF5631 domain-containing protein	81.5	7.4	77.4
MGA_1190	LOCUS_11890	sequence1:1340200..1340625(+)	partial			WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	80.9	13.5	62.3
MGA_1191	LOCUS_11900	sequence1:1340622..1341020(+)	frameshift		1340933	WP_003400086.1	necrotizing toxin immunity factor IFT	76.5	57.4	60.4
MGA_1204	LOCUS_12030	sequence1:1351763..1353616(+)	frameshift		1353589	WP_003902238.1	apolipoprotein N-acyltransferase	88.2	61.8	74.8
MGA_1205	LOCUS_12040	sequence1:1353613..1354419(+)	frameshift		1353589	WP_003902238.1	apolipoprotein N-acyltransferase	92.9	28.5	84.7
MGA_1252	LOCUS_12510	sequence1:1405080..1405325(+)	partial			WP_003409780.1	type II toxin-antitoxin system antitoxin MazE5	96.3	62.4	87.2
MGA_1260	LOCUS_12590	sequence1:1413429..1413824(-)	partial			WP_010908041.1	hypothetical protein	45.8	75.9	68.3
MGA_1266	LOCUS_12650	sequence1:1419135..1419374(-)	partial			WP_010950638.1	class I SAM-dependent methyltransferase	70.9	19.9	66.1
MGA_1271	LOCUS_12700	sequence1:1421610..1421909(+)	partial			WP_003408976.1	type VII secretion system ESX-5 target PE18	73.7	73.7	74.0
MGA_1278	LOCUS_12770	sequence1:1427352..1428365(+)	partial			WP_162496169.1	NADP-dependent oxidoreductase	97.9	74.4	49.1
MGA_1281	LOCUS_12800	sequence1:1429081..1429341(+)	partial			WP_003723640.1	elongation factor Tu	95.3	21.8	46.5
MGA_1299	LOCUS_12980	sequence1:1441584..1442078(+)	partial			WP_003905677.1	macro domain-containing protein	99.4	47.5	90.8
MGA_1315	LOCUS_13140	sequence1:1454484..1454900(+)	internal_stop_codon	1454421..1454423(+)		WP_003409420.1	resuscitation-promoting factor RpfC	95.7	73.9	60.9
MGA_1319	LOCUS_13180	sequence1:1457434..1458969(+)	partial			WP_011021092.1	phenylacetate--CoA ligase family protein	35.4	40.7	28.6
MGA_1324	LOCUS_13230	sequence1:1462323..1462526(-)	frameshift,internal_stop_codon	1462322..1462324(-)	1462564	WP_003899060.1	MDR family MFS transporter	100.0	9.5	62.7
MGA_1326	LOCUS_13250	sequence1:1463738..1463953(+)	partial			WP_003895017.1	(2Fe-2S)-binding protein	71.8	73.9	56.9
MGA_1329	LOCUS_13280	sequence1:1465866..1466561(+)	frameshift		1466577,1466540	WP_011022749.1	group II intron reverse transcriptase/maturase	90.9	50.4	61.0
MGA_1330	LOCUS_13290	sequence1:1466601..1466966(+)	frameshift		1466577,1467042,1467006,1466540,1466958	WP_011024495.1	group II intron reverse transcriptase/maturase	95.0	27.7	53.0
MGA_1363	LOCUS_13620	sequence1:1503177..1504118(+)	frameshift		1503141	WP_003409258.1	CocE/NonD family hydrolase	34.5	18.3	61.7
MGA_1379	LOCUS_13780	sequence1:1521717..1523222(+)	partial			WP_010886133.1	PE family protein	23.6	23.7	69.5
MGA_1418	LOCUS_14170	sequence1:1567191..1567730(-)	frameshift		1567768,1567741,1567765,1567759	WP_010950590.1	PPE family protein	97.8	17.1	45.4
MGA_1429	LOCUS_14280	sequence1:1583477..1585357(-)	partial			WP_010950597.1	PE family protein	20.6	20.7	65.1
MGA_1430	LOCUS_14290	sequence1:1586008..1586940(+)	frameshift		1586862	WP_000561483.1	group II intron reverse transcriptase/maturase	69.4	49.0	47.9
MGA_1431	LOCUS_14300	sequence1:1586867..1587274(+)	frameshift		1586865,1587196	WP_011118084.1	group II intron reverse transcriptase/maturase	65.9	18.7	50.6
MGA_1432	LOCUS_14310	sequence1:1587202..1587510(+)	frameshift		1587190	WP_000561483.1	group II intron reverse transcriptase/maturase	91.2	20.7	37.9
MGA_1457	LOCUS_14560	sequence1:1615083..1615646(+)	partial			WP_011727254.1	xanthine dehydrogenase family protein molybdopterin-binding subunit	61.0	15.8	56.1
MGA_1458	LOCUS_14570	sequence1:1615613..1616818(+)	partial			WP_011727254.1	xanthine dehydrogenase family protein molybdopterin-binding subunit	99.5	55.3	65.7
MGA_1520	LOCUS_15190	sequence1:1682651..1683178(-)	partial			WP_013225120.1	class I SAM-dependent methyltransferase	56.0	47.8	48.0
MGA_1533	LOCUS_15320	sequence1:1694223..1694426(+)	frameshift		1694179	WP_003408266.1	metalloregulator ArsR/SmtB family transcription factor	100.0	30.7	88.1
MGA_1537	LOCUS_15360	sequence1:1697202..1697474(-)	partial			WP_003408261.1	DUF427 domain-containing protein	92.2	72.2	95.2
MGA_1538	LOCUS_15370	sequence1:1697650..1699227(+)	frameshift		1699203	WP_003907117.1	radical SAM protein	94.7	64.0	86.9
MGA_1539	LOCUS_15380	sequence1:1699224..1700021(+)	frameshift		1699203	WP_003907117.1	radical SAM protein	99.6	34.1	69.5
MGA_1540	LOCUS_15390	sequence1:1700072..1701535(-)	partial			WP_003401938.1	HNH endonuclease signature motif containing protein	69.4	77.1	72.9
MGA_1541	LOCUS_15400	sequence1:1701660..1701878(+)	partial			WP_003408257.1	ATP-binding cassette domain-containing protein	81.9	10.0	88.1
MGA_1594	LOCUS_15930	sequence1:1776899..1777300(-)	partial			WP_003408004.1	TM2 domain-containing protein	78.9	71.9	73.3
MGA_1595	LOCUS_15940	sequence1:1777635..1779293(-)	partial			WP_003408002.1	prolipoprotein diacylglyceryl transferase	71.4	78.4	59.9
MGA_1614	LOCUS_16130	sequence1:1794723..1795442(+)	partial			WP_164929937.1	TRIC cation channel family protein	88.7	74.9	40.6
MGA_1628	LOCUS_16270	sequence1:1808006..1808683(+)	partial			WP_003407798.1	NlpC/P60 family peptidoglycan-binding protein RipD	71.6	70.0	85.1
MGA_1636	LOCUS_16350	sequence1:1820560..1820715(-)	partial			WP_003407780.1	F420H(2)-dependent quinone reductase	82.4	28.4	83.3
MGA_1679	LOCUS_16780	sequence1:1880064..1884380(-)	frameshift,internal_stop_codon	1884400..1884402(-)	1884402,1884381	WP_206334115.1	type I polyketide synthase	66.7	18.6	36.9
MGA_1680	LOCUS_16790	sequence1:1884400..1886055(-)	frameshift,internal_stop_codon	1884553..1884555(-)	1884459,1884573,1884407	WP_041180293.1	type I polyketide synthase	93.8	24.3	62.4
MGA_1681	LOCUS_16800	sequence1:1886214..1890308(-)	frameshift		1890379,1890397,1889023	WP_067456433.1	type I polyketide synthase	94.5	33.2	45.9
MGA_1683	LOCUS_16820	sequence1:1895050..1896111(+)	frameshift		1896087	WP_003913253.1	type I polyketide synthase	100.0	16.7	78.5
MGA_1684	LOCUS_16830	sequence1:1896446..1896796(+)	frameshift		1896425,1896791	WP_010950554.1	type I polyketide synthase	99.1	5.5	86.1
MGA_1685	LOCUS_16840	sequence1:1896793..1901328(+)	frameshift		1896793	WP_003913253.1	type I polyketide synthase	99.1	71.0	81.9
MGA_1687	LOCUS_16860	sequence1:1902629..1903414(-)	frameshift,internal_stop_codon	1903461..1903463(-)	1903523,1903622	WP_003407670.1	class I SAM-dependent methyltransferase	100.0	75.2	80.5
MGA_1689	LOCUS_16880	sequence1:1907257..1908084(-)	partial			WP_010950552.1	fatty-acid--AMP ligase FAAL25/FadD25	99.6	46.8	77.0
MGA_1691	LOCUS_16900	sequence1:1909110..1909337(-)	frameshift		1909324	WP_085100849.1	hypothetical protein	90.7	47.2	48.5
MGA_1692	LOCUS_16910	sequence1:1909601..1910572(-)	partial			WP_003901187.1	fatty-acid--AMP ligase FAAL25/FadD25	97.2	53.2	75.5
MGA_1701	LOCUS_17000	sequence1:1919526..1920257(-)	partial			WP_005110290.1	TylF/MycF/NovP-related O-methyltransferase	51.9	26.2	40.2
MGA_1718	LOCUS_17170	sequence1:1938213..1939160(+)	partial			WP_061481638.1	hypothetical protein	55.9	63.7	32.5
MGA_1744	LOCUS_17430	sequence1:1963131..1964243(+)	partial			WP_003407494.1	PE family protein	37.3	37.3	71.0
MGA_1751	LOCUS_17500	sequence1:1970315..1973986(-)	partial			WP_003407484.1	intein-containing Fe-S cluster assembly protein SufB	57.3	83.0	94.7
MGA_1766	LOCUS_17650	sequence1:1989441..1990376(-)	frameshift		1989608,1989575,1989620,1989599	WP_010886177.1	PE family protein	39.2	20.9	50.0
MGA_1768	LOCUS_17670	sequence1:1990550..1997491(-)	partial			WP_211695346.1	PPE family protein	68.4	50.3	42.3
MGA_1770	LOCUS_17690	sequence1:1998213..1998371(-)	internal_stop_codon	1998378..1998380(-)		WP_003407419.1	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	86.5	5.9	73.3
MGA_1771	LOCUS_17700	sequence1:1998378..1998734(-)	internal_stop_codon	1998378..1998380(-)		WP_003407419.1	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	100.0	15.4	81.4
MGA_1778	LOCUS_17770	sequence1:2003473..2004360(+)	partial			WP_010886115.1	hypothetical protein	29.2	36.6	51.2
MGA_1780	LOCUS_17790	sequence1:2005152..2005742(+)	partial			WP_003898977.1	HNH endonuclease signature motif containing protein	94.4	40.7	57.3
MGA_1784	LOCUS_17830	sequence1:2010296..2010871(-)	partial			WP_003407376.1	PucR family transcriptional regulator	43.5	19.7	55.4
MGA_1795	LOCUS_17940	sequence1:2023525..2024799(-)	partial			WP_003401938.1	HNH endonuclease signature motif containing protein	78.1	74.1	73.4
MGA_1797	LOCUS_17960	sequence1:2025310..2026473(-)	frameshift,internal_stop_codon	2025310..2025312(-)	2025306	WP_013229317.1	IS4 family transposase	97.4	80.7	37.2
MGA_1814	LOCUS_18130	sequence1:2042581..2042790(+)	frameshift		2042784,2042573	WP_003407276.1	alpha/beta hydrolase	100.0	21.6	84.1
MGA_1815	LOCUS_18140	sequence1:2042768..2043292(+)	frameshift		2042787,2042573	WP_003407276.1	alpha/beta hydrolase	80.5	50.5	67.1
MGA_1816	LOCUS_18150	sequence1:2043244..2043501(-)	partial			WP_003898977.1	HNH endonuclease signature motif containing protein	91.8	17.2	82.1
MGA_1819	LOCUS_18180	sequence1:2043957..2044202(+)	partial			WP_003904648.1	hypothetical protein	90.1	55.1	60.0
MGA_1825	LOCUS_18240	sequence1:2048125..2048871(-)	frameshift		2048912	WP_164921306.1	ATP-binding protein	89.1	43.4	32.6
MGA_1826	LOCUS_18250	sequence1:2048868..2049596(-)	frameshift		2048903	WP_164922361.1	ATP-binding protein	93.0	39.7	30.7
MGA_1827	LOCUS_18260	sequence1:2049598..2049798(-)	frameshift		2049761	WP_010950565.1	DUF2742 domain-containing protein	87.9	43.9	67.2
MGA_1829	LOCUS_18280	sequence1:2050292..2050603(-)	frameshift		2050568	WP_003903978.1	hypothetical protein	70.9	42.1	41.1
MGA_1830	LOCUS_18290	sequence1:2050781..2051467(-)	frameshift		2051456	WP_015776585.1	recombinase family protein	89.5	41.5	28.8
MGA_1831	LOCUS_18300	sequence1:2051364..2052200(-)	frameshift		2051570	WP_003903979.1	recombinase family protein	92.1	50.7	40.2
MGA_1834	LOCUS_18330	sequence1:2054026..2054439(-)	partial			WP_011250661.1	DUF86 domain-containing protein	69.3	67.1	37.5
MGA_1837	LOCUS_18360	sequence1:2055174..2055401(+)	frameshift		2055148	WP_011227971.1	type II toxin-antitoxin system VapC family toxin	90.7	53.1	47.8
MGA_1838	LOCUS_18370	sequence1:2056058..2056537(+)	frameshift		2056498	WP_003911027.1	PE family protein	73.0	26.4	68.1
MGA_1843	LOCUS_18420	sequence1:2061445..2062113(+)	partial			WP_013096575.1	DUF2891 domain-containing protein	41.0	32.0	32.1
MGA_1848	LOCUS_18470	sequence1:2065748..2066065(-)	partial			WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	86.7
MGA_1871	LOCUS_18700	sequence1:2087797..2088807(+)	frameshift,internal_stop_codon	2087549..2087551(+)	2087644	WP_003412968.1	ERCC4 domain-containing protein	100.0	72.6	97.6
MGA_1884	LOCUS_18830	sequence1:2099611..2101407(+)	partial			WP_010886177.1	PE family protein	21.1	20.9	48.4
MGA_1892	LOCUS_18910	sequence1:2105921..2106133(+)	frameshift,internal_stop_codon	2105904..2105906(+)	2105840	WP_003901422.1	type II toxin-antitoxin system VapB family antitoxin	55.7	42.4	97.4
MGA_1900	LOCUS_18990	sequence1:2109994..2110599(-)	frameshift		2110736	WP_144956692.1	DDE-type integrase/transposase/recombinase	100.0	42.8	87.1
MGA_1901	LOCUS_19000	sequence1:2110979..2111401(-)	frameshift		2111146,2110741	WP_003917061.1	DDE-type integrase/transposase/recombinase	60.7	18.1	91.8
MGA_1906	LOCUS_19050	sequence1:2120552..2123371(-)	partial			WP_164930412.1	type I-U CRISPR-associated helicase/endonuclease Cas3	57.4	58.8	27.7
MGA_1920	LOCUS_19190	sequence1:2136366..2137439(+)	partial			WP_003911922.1	DUF2189 domain-containing protein	67.5	78.2	58.3
MGA_1926	LOCUS_19250	sequence1:2145308..2145979(-)	frameshift,internal_stop_codon	2145118..2145120(-),2145228..2145230(-),2145307..2145309(-),2145073..2145075(-),2145117..2145119(-),2145227..2145229(-),2145305..2145307(-)	2145409,2145345,2145313,2145316,2145412,2145284,2145255,2145319,2145324,2145397,2145370,2145147,2145278	WP_010886165.1	PE family protein	54.3	7.9	57.9
MGA_1936	LOCUS_19350	sequence1:2154128..2155042(+)	partial			WP_003906341.1	HNH endonuclease signature motif containing protein	87.2	52.7	58.1
MGA_1954	LOCUS_19530	sequence1:2176773..2178377(+)	partial			WP_003911027.1	PE family protein	26.2	32.3	50.7
MGA_1955	LOCUS_19540	sequence1:2178526..2180142(+)	partial			WP_003911027.1	PE family protein	26.0	32.3	55.6
MGA_1979	LOCUS_19780	sequence1:2200499..2201521(-)	partial			WP_003814755.1	glycosyltransferase family 2 protein	67.9	77.6	45.7
MGA_1980	LOCUS_19790	sequence1:2201738..2203558(-)	partial			WP_010886177.1	PE family protein	20.1	20.9	50.8
MGA_1981	LOCUS_19800	sequence1:2203621..2204433(-)	partial			WP_010907735.1	aldo/keto reductase	74.8	67.1	78.7
MGA_1995	LOCUS_19940	sequence1:2214849..2215721(+)	frameshift		2215490,2215542	WP_003906521.1	HNH endonuclease signature motif containing protein	73.1	47.0	50.5
MGA_1996	LOCUS_19950	sequence1:2215718..2216263(+)	frameshift		2215490,2216155,2215542	WP_003906521.1	HNH endonuclease signature motif containing protein	77.3	30.8	72.9
MGA_1997	LOCUS_19960	sequence1:2216554..2216877(+)	frameshift		2216538,2216373,2216439	WP_011731432.1	IS1380-like element ISMsm10 family transposase	75.7	16.7	38.3
MGA_2003	LOCUS_20020	sequence1:2222358..2224550(-)	partial			WP_009938544.1	PE family protein	8.9	8.4	55.4
MGA_2008	LOCUS_20070	sequence1:2227490..2229985(-)	frameshift		2229696,2229633,2230035	WP_170213355.1	BTAD domain-containing putative transcriptional regulator	94.6	79.6	38.7
MGA_2009	LOCUS_20080	sequence1:2229868..2230455(-)	frameshift		2229990	WP_013227699.1	BTAD domain-containing putative transcriptional regulator	78.5	16.5	55.6
MGA_2015	LOCUS_20140	sequence1:2236203..2237303(+)	frameshift		2237300	WP_010950755.1	ACR3 family arsenite efflux transporter	97.0	71.3	89.3
MGA_2016	LOCUS_20150	sequence1:2237296..2237730(+)	frameshift		2237300	WP_003413686.1	ACR3 family arsenite efflux transporter	93.8	27.1	85.9
MGA_2019	LOCUS_20180	sequence1:2239441..2239860(+)	partial			WP_003899409.1	hypothetical protein	25.9	25.9	62.2
MGA_2025	LOCUS_20240	sequence1:2245138..2245473(-)	partial			WP_003917120.1	DUF732 domain-containing protein	73.9	46.4	39.5
MGA_2044	LOCUS_20430	sequence1:2263175..2263531(-)	partial			WP_003413912.1	multidrug ABC transporter permease	86.4	43.0	88.2
MGA_2075	LOCUS_20740	sequence1:2288750..2289076(-)	partial			WP_010908067.1	LysM peptidoglycan-binding domain-containing protein	95.4	62.8	63.1
MGA_2110	LOCUS_21080	sequence1:2324438..2324815(-)	partial			WP_003400580.1	type II toxin-antitoxin system ribonuclease VapC1	57.6	54.1	48.6
MGA_2115	LOCUS_21130	sequence1:2328022..2328237(-)	internal_stop_codon	2328277..2328279(-),2328280..2328282(-)		WP_003414061.1	type II toxin-antitoxin system VapB family antitoxin	95.8	77.3	79.4
MGA_2117	LOCUS_21150	sequence1:2328704..2328856(-)	frameshift		2328909	WP_003414066.1	type II toxin-antitoxin system VapB family antitoxin	84.0	47.2	69.0
MGA_2124	LOCUS_21220	sequence1:2332985..2333239(+)	frameshift,internal_stop_codon	2333250..2333252(+)	2332968,2333276	WP_011027647.1	acyl-CoA dehydrogenase	81.0	17.3	70.6
MGA_2146	LOCUS_21440	sequence1:2353183..2353521(-)	frameshift		2353556,2353717,2353711	WP_003414139.1	acyl-CoA dehydrogenase family protein	98.2	26.8	93.6
MGA_2147	LOCUS_21450	sequence1:2353700..2353849(-)	frameshift		2353556,2353717,2353711	WP_003414139.1	acyl-CoA dehydrogenase family protein	89.8	10.7	88.6
MGA_2161	LOCUS_21590	sequence1:2365211..2365600(+)	partial			WP_003414177.1	DUF1778 domain-containing protein	79.8	66.5	96.1
MGA_2175	LOCUS_21730	sequence1:2385002..2385223(-)	partial			WP_003405603.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	71.2	20.7	86.5
MGA_2176	LOCUS_21740	sequence1:2385618..2386079(+)	frameshift		2385555,2385636,2385549,2385534	WP_003414195.1	hypothetical protein	92.8	70.3	83.1
MGA_2178	LOCUS_21760	sequence1:2387612..2387962(+)	frameshift		2387923,2387607	WP_003414201.1	ExeA family protein	89.7	38.5	85.6
MGA_2179	LOCUS_21770	sequence1:2387928..2388356(+)	frameshift		2387923	WP_003414201.1	ExeA family protein	100.0	52.6	83.8
MGA_2194	LOCUS_21920	sequence1:2399988..2402732(-)	partial			WP_003899505.1	translation initiation factor IF-2	68.7	69.8	94.1
MGA_2195	LOCUS_21930	sequence1:2403586..2404578(+)	frameshift		2404353,2404458,2404365,2404431,2404656,2404655,2404559,2404434,2404662,2404666,2404636,2404638,2404671	WP_010886084.1	PE family protein	42.1	17.8	50.4
MGA_2196	LOCUS_21940	sequence1:2404674..2406176(+)	frameshift		2405634,2404430,2404559,2404947,2405782,2404637,2404895,2404707,2404780,2404589,2404655,2404658,2404661,2404790,2404604,2404670	WP_010886084.1	PE family protein	12.0	7.2	61.7
MGA_2208	LOCUS_22060	sequence1:2418965..2419225(+)	partial			WP_003414559.1	HoxN/HupN/NixA family nickel/cobalt transporter	59.3	13.7	86.3
MGA_2243	LOCUS_22410	sequence1:2455620..2456186(+)	frameshift		2456165	WP_003414678.1	M23 family metallopeptidase	92.6	71.5	77.0
MGA_2260	LOCUS_22580	sequence1:2470579..2471079(-)	partial			WP_003414731.1	30S ribosomal protein S16	69.3	71.0	89.6
MGA_2264	LOCUS_22620	sequence1:2473924..2474217(-)	partial			WP_011027542.1	heavy metal translocating P-type ATPase	76.3	9.8	52.7
MGA_2270	LOCUS_22680	sequence1:2481804..2482037(-)	partial			WP_003906521.1	HNH endonuclease signature motif containing protein	70.1	12.0	66.7
MGA_2278	LOCUS_22760	sequence1:2489157..2489390(+)	partial			WP_003405836.1	type II toxin-antitoxin system antitoxin MazE3	100.0	73.6	46.2
MGA_2310	LOCUS_23080	sequence1:2527311..2527526(+)	frameshift		2527327	WP_003911958.1	DDE-type integrase/transposase/recombinase	78.9	14.6	66.1
MGA_2312	LOCUS_23100	sequence1:2529378..2529776(+)	frameshift		2529882	WP_003416045.1	fluoride efflux transporter CrcB	84.1	84.1	73.9
MGA_2318	LOCUS_23160	sequence1:2534845..2535036(+)	frameshift		2535216,2535105,2535108,2535021	WP_003416059.1	hydrogenase	76.2	36.1	77.1
MGA_2326	LOCUS_23240	sequence1:2542267..2542476(-)	frameshift		2542475	WP_003416094.1	LLM class F420-dependent oxidoreductase	53.6	11.1	64.9
MGA_2327	LOCUS_23250	sequence1:2542473..2542778(-)	frameshift		2542475	WP_003416094.1	LLM class F420-dependent oxidoreductase	99.0	29.9	73.0
MGA_2338	LOCUS_23360	sequence1:2553458..2553925(-)	partial			WP_003416124.1	hypothetical protein	43.9	46.2	57.4
MGA_2343	LOCUS_23410	sequence1:2559390..2559593(-)	partial			WP_011730258.1	hypothetical protein	67.2	69.2	66.7
MGA_2368	LOCUS_23660	sequence1:2583664..2586897(-)	partial			WP_211695346.1	PPE family protein	99.5	33.5	40.5
MGA_2369	LOCUS_23670	sequence1:2587262..2588563(-)	frameshift,internal_stop_codon	2588429..2588431(-),2588720..2588722(-)	2588644,2588716	WP_003911027.1	PE family protein	26.8	26.4	48.3
MGA_2370	LOCUS_23680	sequence1:2588720..2591629(-)	frameshift,internal_stop_codon	2589295..2589297(-)	2588616,2588730,2589021,2588574	WP_003911027.1	PE family protein	12.0	26.4	51.7
MGA_2390	LOCUS_23880	sequence1:2611561..2613351(-)	partial			WP_010950839.1	PPE family protein	49.5	46.7	48.1
MGA_2391	LOCUS_23890	sequence1:2613581..2615461(-)	partial			WP_010950840.1	PPE family protein	45.7	44.8	50.5
MGA_2392	LOCUS_23900	sequence1:2615749..2616072(-)	partial			WP_003416573.1	TetR/AcrR family transcriptional regulator	80.4	40.4	80.2
MGA_2395	LOCUS_23930	sequence1:2619799..2620239(+)	partial			WP_003900644.1	NADH-quinone oxidoreductase subunit NuoN	99.3	27.9	81.8
MGA_2396	LOCUS_23940	sequence1:2620306..2621955(-)	frameshift,internal_stop_codon	2621952..2621954(-)	2621927	WP_010950840.1	PPE family protein	96.4	85.0	43.4
MGA_2397	LOCUS_23950	sequence1:2621952..2622179(-)	frameshift,internal_stop_codon	2621952..2621954(-)	2621927	WP_003900088.1	PPE family protein	66.7	8.6	82.0
MGA_2399	LOCUS_23970	sequence1:2623047..2623319(-)	partial			WP_003416576.1	aromatic ring-hydroxylating dioxygenase subunit alpha	97.8	23.0	71.6
MGA_2413	LOCUS_24110	sequence1:2635680..2635907(-)	partial			WP_235624217.1	SGNH hydrolase domain-containing protein	97.3	10.5	61.6
MGA_2468	LOCUS_24660	sequence1:2690019..2690366(+)	partial			WP_003416932.1	Rv3235 family protein	100.0	52.6	65.2
MGA_2510	LOCUS_25080	sequence1:2734879..2735553(+)	frameshift,internal_stop_codon	2734871..2734873(+)	2734828	WP_003899998.1	GtrA family protein	100.0	82.0	85.5
MGA_2516	LOCUS_25140	sequence1:2739420..2739650(+)	frameshift		2739296,2739420	WP_010886160.1	acyl-CoA carboxylase subunit epsilon	100.0	42.9	80.3
MGA_2518	LOCUS_25160	sequence1:2740490..2741158(+)	partial			WP_010932135.1	ISL3 family transposase	43.7	24.8	29.7
MGA_2523	LOCUS_25210	sequence1:2746518..2746781(-)	partial			WP_011729574.1	IS1380-like element ISMsm12 family transposase	90.8	19.5	47.3
MGA_2556	LOCUS_25540	sequence1:2780576..2780869(-)	frameshift		2780611	WP_011727857.1	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	88.7	30.1	60.0
MGA_2558	LOCUS_25560	sequence1:2781261..2781524(-)	frameshift		2781344	WP_221458180.1	IS982 family transposase	79.3	24.3	41.4
MGA_2573	LOCUS_25710	sequence1:2795352..2795957(+)	partial			WP_003905037.1	IS110 family transposase	100.0	35.3	83.6
MGA_2576	LOCUS_25740	sequence1:2798489..2800156(+)	partial			WP_010886107.1	PE family protein	22.9	16.6	60.6
MGA_2577	LOCUS_25750	sequence1:2800204..2800521(+)	partial			WP_080603738.1	aspartate aminotransferase family protein	86.7	20.0	72.5
MGA_2578	LOCUS_25760	sequence1:2800911..2802698(+)	partial			WP_010950490.1	PE family protein	20.5	15.8	63.1
MGA_2582	LOCUS_25800	sequence1:2805984..2806193(+)	partial			WP_003402143.1	hypothetical protein	56.5	28.7	64.1
MGA_2625	LOCUS_26220	sequence1:2884453..2885190(+)	frameshift		2885122,2885092,2885094,2885095,2885103,2884977,2884819,2885017,2885118	WP_010886168.1	PE family protein	60.0	20.1	82.3
MGA_2631	LOCUS_26280	sequence1:2890373..2891056(+)	partial			WP_003417946.1	nucleoside hydrolase IunH	86.8	64.0	75.3
MGA_2632	LOCUS_26290	sequence1:2891071..2891433(+)	partial			WP_003417946.1	nucleoside hydrolase IunH	100.0	39.0	80.0
MGA_2651	LOCUS_26480	sequence1:2912430..2913311(-)	partial			WP_003418011.1	anti-sigma D factor RsdA	77.1	70.6	57.1
MGA_2659	LOCUS_26560	sequence1:2919489..2920115(-)	frameshift		2919497	WP_010907694.1	bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB/ribosomal protein alanine acetyltransferase RimI	99.0	57.7	74.9
MGA_2671	LOCUS_26680	sequence1:2932903..2933178(-)	partial			WP_003418301.1	hypothetical protein	68.1	60.2	66.1
MGA_2685	LOCUS_26820	sequence1:2948072..2948785(-)	partial			WP_003418346.1	50S ribosomal protein L17	59.1	77.8	85.7
MGA_2691	LOCUS_26880	sequence1:2952322..2953029(-)	partial			WP_012257896.1	Fic family protein	83.8	48.0	30.2
MGA_2701	LOCUS_26980	sequence1:2963375..2963512(-)	frameshift		2963508	WP_003901008.1	hypothetical protein	95.6	24.6	95.3
MGA_2702	LOCUS_26990	sequence1:2964121..2964765(-)	frameshift,internal_stop_codon	2964119..2964121(-)	2964058,2964097,2964442,2964301	WP_003898568.1	DUF4226 domain-containing protein	28.0	22.4	88.3
MGA_2708	LOCUS_27050	sequence1:2967657..2967971(-)	partial			WP_014877086.1	thiamine pyrophosphate-binding protein	90.4	15.5	71.3
MGA_2791	LOCUS_27880	sequence1:3049423..3054138(-)	partial			WP_010886173.1	PE family protein	7.6	16.2	63.0
MGA_2792	LOCUS_27890	sequence1:3054484..3057528(-)	partial			WP_003899905.1	serine/threonine protein kinase PknK	44.0	43.7	41.6
MGA_2794	LOCUS_27910	sequence1:3058353..3060641(-)	partial			WP_003416064.1	serine/threonine protein kinase PknK	60.0	44.3	44.5
MGA_2799	LOCUS_27960	sequence1:3065209..3065823(+)	partial			WP_003403302.1	methoxy mycolic acid synthase MmaA3	80.4	55.6	78.0
MGA_2800	LOCUS_27970	sequence1:3065712..3066125(-)	frameshift		3066249	WP_164689163.1	IS3 family transposase	96.4	39.3	59.8
MGA_2802	LOCUS_27990	sequence1:3067036..3067668(+)	partial			WP_003403302.1	methoxy mycolic acid synthase MmaA3	80.0	54.9	76.8
MGA_2821	LOCUS_28170	sequence1:3086348..3087352(-)	partial			WP_003898526.1	hypothetical protein	46.4	77.1	76.1
MGA_2838	LOCUS_28340	sequence1:3100679..3101698(-)	frameshift		3101723	WP_011024495.1	group II intron reverse transcriptase/maturase	97.1	79.5	49.1
MGA_2839	LOCUS_28350	sequence1:3101673..3101939(-)	frameshift		3101723	WP_011024495.1	group II intron reverse transcriptase/maturase	71.6	15.2	68.3
MGA_2841	LOCUS_28370	sequence1:3102831..3103862(+)	partial			WP_003418263.1	IS3 family transposase	66.5	62.3	52.7
MGA_2842	LOCUS_28380	sequence1:3104219..3104947(-)	partial			WP_010950583.1	respiratory nitrate reductase subunit gamma	100.0	36.3	79.8
MGA_2849	LOCUS_28450	sequence1:3112823..3113095(-)	frameshift,internal_stop_codon	3113171..3113173(-)	3112990	WP_003900464.1	HNH endonuclease signature motif containing protein	36.7	6.4	85.7
MGA_2860	LOCUS_28560	sequence1:3127121..3127342(-)	partial			WP_003898507.1	hypothetical protein	89.0	57.5	73.8
MGA_2874	LOCUS_28700	sequence1:3143154..3145139(+)	partial			WP_010886165.1	PE family protein	20.0	8.6	57.6
MGA_2901	LOCUS_28970	sequence1:3170576..3171448(+)	frameshift		3171217,3171269	WP_003898977.1	HNH endonuclease signature motif containing protein	85.9	54.4	50.2
MGA_2902	LOCUS_28980	sequence1:3171445..3171966(+)	frameshift		3171217,3171882,3171269	WP_003906521.1	HNH endonuclease signature motif containing protein	80.9	30.8	72.1
MGA_2905	LOCUS_29010	sequence1:3173290..3174969(-)	partial			WP_003900169.1	hypothetical protein	73.7	74.5	58.1
MGA_2920	LOCUS_29160	sequence1:3188815..3190272(-)	partial			WP_009935618.1	PPE family protein	82.1	44.1	47.8
MGA_2929	LOCUS_29250	sequence1:3197444..3197680(-)	partial			WP_003402715.1	hypothetical protein	66.7	52.5	63.5
MGA_2972	LOCUS_29680	sequence1:3239601..3240605(+)	partial			WP_003402327.1	hypothetical protein	33.2	69.1	65.5
MGA_2982	LOCUS_29780	sequence1:3249311..3249589(-)	partial			WP_003402297.1	putative holin	72.8	84.8	80.6
MGA_3005	LOCUS_30010	sequence1:3272174..3272368(-)	partial			WP_003406261.1	HAD-IIA family hydrolase	95.3	22.1	78.7
MGA_3006	LOCUS_30020	sequence1:3272642..3273049(+)	partial			WP_003406266.1	hypothetical protein	94.8	68.6	79.7
MGA_3013	LOCUS_30090	sequence1:3279135..3279389(-)	partial			WP_003402203.1	LON peptidase substrate-binding domain-containing protein	100.0	38.7	63.1
MGA_3020	LOCUS_30160	sequence1:3284681..3285133(+)	partial			WP_003402171.1	hypothetical protein	75.3	74.8	49.6
MGA_3023	LOCUS_30190	sequence1:3290224..3290727(-)	frameshift		3290858,3290924,3290774	WP_003404761.1	IS607 family element RNA-guided endonuclease TnpB	100.0	30.4	76.0
MGA_3024	LOCUS_30200	sequence1:3291105..3291869(-)	frameshift		3290857,3290923,3291044,3291158	WP_003404761.1	IS607 family element RNA-guided endonuclease TnpB	93.3	43.1	77.6
MGA_3026	LOCUS_30220	sequence1:3292675..3293724(+)	frameshift,internal_stop_codon	3293423..3293425(+)	3293464,3293418,3293466,3293469	WP_010886107.1	PE family protein	35.5	16.2	63.7
MGA_3032	LOCUS_30280	sequence1:3298719..3299018(+)	partial			WP_003402143.1	hypothetical protein	96.0	72.8	73.7
MGA_3040	LOCUS_30360	sequence1:3305275..3305448(-)	frameshift		3305476	WP_013228393.1	DUF2752 domain-containing protein	96.5	36.4	58.2
MGA_3041	LOCUS_30370	sequence1:3305468..3305701(-)	frameshift		3305476	WP_005111747.1	DUF2752 domain-containing protein	96.1	51.7	59.5
MGA_3042	LOCUS_30380	sequence1:3305733..3305975(-)	internal_stop_codon	3305985..3305987(-)		WP_013228394.1	CD225/dispanin family protein	77.5	53.9	40.3
MGA_3057	LOCUS_30530	sequence1:3324663..3326660(-)	internal_stop_codon	3324663..3324665(-)		WP_003911169.1	type I polyketide synthase	98.2	46.1	75.5
MGA_3059	LOCUS_30550	sequence1:3327656..3328090(-)	partial			WP_003900139.1	fatty-acid--AMP ligase FAAL30/FadD30	96.5	24.1	62.4
MGA_3067	LOCUS_30630	sequence1:3338004..3338984(-)	frameshift		3338267,3338739	WP_003401938.1	HNH endonuclease signature motif containing protein	49.4	38.1	78.6
MGA_3084	LOCUS_30800	sequence1:3358312..3358581(+)	partial			WP_003418263.1	IS3 family transposase	76.4	17.3	67.6
MGA_3089	LOCUS_30850	sequence1:3362819..3363364(-)	frameshift		3363452,3362908	WP_003917171.1	IS21 family transposase	83.4	37.1	36.8
MGA_3102	LOCUS_30980	sequence1:3376753..3378705(+)	partial			WP_010886183.1	type VII secretion system ESX-1 associated protein EspK	68.6	63.5	48.3
MGA_3118	LOCUS_31140	sequence1:3393584..3395455(+)	partial			WP_010886105.1	PE family protein	24.4	21.9	52.0
MGA_3132	LOCUS_31280	sequence1:3418616..3419083(-)	frameshift		3418618	WP_003900125.1	hypothetical protein	100.0	70.8	97.4
MGA_3143	LOCUS_31390	sequence1:3431406..3433538(-)	partial			WP_003901837.1	isoniazid-induced protein IniB	11.7	18.8	65.6
MGA_3169	LOCUS_31650	sequence1:3463707..3464009(-)	partial			WP_011727115.1	hypothetical protein	72.0	13.5	48.7
MGA_3171	LOCUS_31670	sequence1:3464765..3465229(-)	partial			WP_003401636.1	hypothetical protein	98.7	68.2	72.4
MGA_3182	LOCUS_31780	sequence1:3474941..3476479(-)	partial			WP_011727115.1	hypothetical protein	66.4	60.5	39.3
MGA_3213	LOCUS_32090	sequence1:3509020..3510024(-)	partial			WP_003417421.1	PDZ-interacting protease regulator Ppr1	53.0	61.9	56.5
MGA_3217	LOCUS_32130	sequence1:3515790..3516683(+)	partial			WP_009936235.1	alpha/beta hydrolase family protein	66.3	44.9	37.1
MGA_3225	LOCUS_32210	sequence1:3525935..3526657(-)	frameshift		3526872,3526704,3526658,3526040	WP_003405897.1	HNH endonuclease signature motif containing protein	89.2	47.2	65.4
MGA_3226	LOCUS_32220	sequence1:3526552..3527112(-)	frameshift		3526704,3526658,3526875	WP_003898977.1	HNH endonuclease signature motif containing protein	51.1	20.9	46.3
MGA_3249	LOCUS_32450	sequence1:3554609..3555061(-)	frameshift		3555038,3555207	WP_003906521.1	HNH endonuclease signature motif containing protein	72.7	24.2	73.4
MGA_3281	LOCUS_32770	sequence1:3595818..3596057(+)	internal_stop_codon	3596055..3596057(+)		WP_003901689.1	PE family protein	94.9	72.1	49.3
MGA_3282	LOCUS_32780	sequence1:3595985..3596941(+)	frameshift		3596936,3595982	WP_010950464.1	PE family protein	21.7	11.3	63.8
MGA_3288	LOCUS_32840	sequence1:3603398..3604396(-)	partial			WP_003908487.1	Ig-like domain-containing protein	78.6	73.9	91.6
MGA_3325	LOCUS_33210	sequence1:3643469..3643603(+)	partial			WP_003910049.1	hypothetical protein	63.6	66.7	89.3
MGA_3332	LOCUS_33280	sequence1:3650951..3652663(+)	partial			WP_003901256.1	PPE family protein	80.9	67.8	49.6
MGA_3336	LOCUS_33320	sequence1:3656108..3656374(-)	partial			WP_010909009.1	class I SAM-dependent methyltransferase	77.3	22.3	62.3
MGA_3338	LOCUS_33340	sequence1:3657600..3658223(-)	frameshift,internal_stop_codon	3658225..3658227(-),3657598..3657600(-)	3658257,3658266	WP_003400961.1	TetR/AcrR family transcriptional regulator	100.0	73.9	74.4
MGA_3376	LOCUS_33720	sequence1:3687585..3687923(+)	partial			WP_010908859.1	DUF1049 domain-containing protein	67.9	67.3	72.4
MGA_3388	LOCUS_33840	sequence1:3698054..3698359(-)	partial			WP_010886107.1	PE family protein	95.0	12.5	59.4
MGA_3403	LOCUS_33990	sequence1:3712017..3712388(+)	partial			WP_003420624.1	GreA/GreB family elongation factor	100.0	74.5	85.4
MGA_3428	LOCUS_34240	sequence1:3754291..3755697(+)	partial			WP_009938544.1	PE family protein	30.3	17.7	41.3
MGA_3440	LOCUS_34360	sequence1:3766524..3766874(+)	frameshift,internal_stop_codon	3766879..3766881(+)	3766868	WP_003899719.1	metallopeptidase family protein	99.1	83.9	86.1
MGA_3445	LOCUS_34410	sequence1:3770042..3770983(+)	frameshift		3770017	WP_235624060.1	LCP family protein	96.8	70.3	66.1
MGA_3448	LOCUS_34440	sequence1:3772621..3773382(-)	partial			WP_003899726.1	DUF4328 domain-containing protein	100.0	72.2	66.1
MGA_3452	LOCUS_34480	sequence1:3776110..3776808(+)	frameshift,internal_stop_codon	3776981..3776983(+)	3776781	WP_003399745.1	TMEM165/GDT1 family protein	97.0	74.5	65.3
MGA_3467	LOCUS_34630	sequence1:3791119..3792003(+)	frameshift		3790962	WP_003399818.1	MinD/ParA family protein	96.9	73.6	75.3
MGA_3468	LOCUS_34640	sequence1:3792144..3792431(-)	frameshift		3792435,3792463	WP_003899734.1	transcriptional regulator WhiB6	100.0	82.8	83.3
MGA_3482	LOCUS_34780	sequence1:3807892..3808680(+)	frameshift		3807625,3808013,3807775	WP_003909105.1	type VII secretion system ESX-1 associated protein EspI	100.0	39.3	66.0
MGA_3485	LOCUS_34810	sequence1:3811208..3813505(-)	partial			WP_010886183.1	type VII secretion system ESX-1 associated protein EspK	36.9	39.4	66.7
MGA_3492	LOCUS_34880	sequence1:3822050..3823714(-)	partial			WP_003400012.1	type VII secretion system ESX-2 serine protease mycosin MycP2	57.9	58.4	88.8
MGA_3508	LOCUS_35040	sequence1:3842739..3843164(-)	frameshift		3842873	WP_010950962.1	hypothetical protein	63.8	60.4	58.9
MGA_3510	LOCUS_35060	sequence1:3845623..3845967(-)	frameshift		3846047	WP_010950962.1	hypothetical protein	63.2	48.3	72.2
MGA_3513	LOCUS_35090	sequence1:3847217..3849583(-)	partial			WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	79.7	72.9	65.9
MGA_3533	LOCUS_35290	sequence1:3870744..3871079(-)	partial			WP_003899766.1	membrane protein insertion efficiency factor YidD	73.9	68.3	73.2
MGA_3535	LOCUS_35310	sequence1:3871455..3871631(-)	partial			WP_003855320.1	50S ribosomal protein L34	43.1	53.2	96.0
MGA_3558	LOCUS_35530	sequence1:3900256..3900633(+)	frameshift		3900642,3900579,3900724,3900679	WP_003405897.1	HNH endonuclease signature motif containing protein	57.6	16.0	62.5
MGA_3565	LOCUS_35600	sequence1:3905473..3905700(+)	partial			WP_003400405.1	DUF2694 domain-containing protein	100.0	74.3	85.3
MGA_3567	LOCUS_35620	sequence1:3907211..3907405(+)	frameshift,internal_stop_codon	3907345..3907347(+)	3907395,3907429,3907479,3907560,3907372	WP_010886177.1	PE family protein	85.9	9.4	49.1
MGA_3568	LOCUS_35630	sequence1:3907464..3907955(+)	frameshift,internal_stop_codon	3907955..3907957(+),3907345..3907347(+)	3907395,3907429,3907479,3907560,3907372	WP_010886177.1	PE family protein	23.3	6.5	71.1
MGA_3572	LOCUS_35670	sequence1:3910182..3911324(+)	frameshift		3910126,3910183	WP_000561483.1	group II intron reverse transcriptase/maturase	97.6	82.9	42.7
MGA_3599	LOCUS_35940	sequence1:3937854..3938798(+)	frameshift		3937746	WP_003400562.1	glycoside hydrolase family 6 protein	100.0	82.6	85.0
MGA_3602	LOCUS_35970	sequence1:3940260..3940445(-)	partial			WP_003403365.1	ribonuclease VapC6	93.4	44.9	87.7
MGA_3611	LOCUS_36060	sequence1:3952357..3955794(+)	partial			WP_010886108.1	PE family protein	15.8	18.4	41.4
MGA_3626	LOCUS_36200	sequence1:3968385..3968744(+)	frameshift		3968606	WP_010950616.1	PE family protein	52.9	13.5	63.5
MGA_3632	LOCUS_36260	sequence1:3972842..3973849(-)	partial			WP_126863657.1	LLM class flavin-dependent oxidoreductase	59.7	53.8	30.8
MGA_3634	LOCUS_36280	sequence1:3974661..3974948(+)	partial			WP_206819270.1	TetR/AcrR family transcriptional regulator	81.1	39.6	37.2
MGA_3659	LOCUS_36530	sequence1:4001106..4001288(+)	partial			WP_010975849.1	thioredoxin family protein	98.3	23.8	72.9
MGA_3663	LOCUS_36570	sequence1:4004886..4005668(-)	frameshift		4005661	WP_008783747.1	IS30-like element ISBlo4 family transposase	95.0	57.9	60.3
MGA_3686	LOCUS_36800	sequence1:4035716..4036018(-)	frameshift		4036005	WP_011729339.1	hypothetical protein	91.0	16.4	46.8
MGA_3697	LOCUS_36910	sequence1:4047811..4048272(+)	partial			WP_003420408.1	YbaB/EbfC family nucleoid-associated protein	62.7	72.2	80.2
MGA_3699	LOCUS_36930	sequence1:4049139..4049834(+)	frameshift		4048992	WP_003420405.1	hypothetical protein	98.3	76.7	85.9
MGA_3709	LOCUS_37030	sequence1:4061852..4062190(+)	partial			WP_003419816.1	hypothetical protein	58.0	64.2	48.5
MGA_3726	LOCUS_37200	sequence1:4078506..4079489(+)	partial			WP_008783747.1	IS30-like element ISBlo4 family transposase	94.5	73.0	55.9
MGA_3731	LOCUS_37250	sequence1:4083669..4084820(-)	partial			WP_003419768.1	membrane protein	85.9	74.7	60.8
MGA_3734	LOCUS_37280	sequence1:4086440..4088644(-)	partial			WP_013227688.1	SpoIIE family protein phosphatase	85.3	45.7	42.0
MGA_3740	LOCUS_37340	sequence1:4091629..4092621(-)	partial			WP_064243032.1	AraC family transcriptional regulator	44.5	43.8	38.1
MGA_3785	LOCUS_37790	sequence1:4134012..4136561(-)	partial			WP_010886067.1	PE family protein	14.8	26.1	56.7
MGA_3794	LOCUS_37880	sequence1:4146710..4147114(+)	frameshift,internal_stop_codon	4146686..4146688(+)	4147009	WP_003898629.1	PPE family protein	69.4	21.2	57.0
MGA_3799	LOCUS_37930	sequence1:4152156..4153652(-)	partial			WP_009939865.1	PE family protein	26.7	22.7	50.4
MGA_3832	LOCUS_38260	sequence1:4184269..4184988(+)	frameshift		4184865,4184802,4184869,4184746,4184830,4184820,4184856,4184857,4184859,4184860,4184862	WP_010886171.1	PE family protein	61.1	10.6	40.4
MGA_3834	LOCUS_38280	sequence1:4185451..4185876(+)	frameshift		4185813	WP_005083436.1	CbtA family protein	41.1	24.4	60.9
MGA_3839	LOCUS_38330	sequence1:4188985..4189749(+)	frameshift		4189122,4189719,4189221,4189303,4189276,4189710,4189727	WP_010886177.1	PE family protein	48.8	21.2	84.7
MGA_3840	LOCUS_38340	sequence1:4189710..4190738(+)	frameshift		4189710	WP_010886177.1	PE family protein	19.9	11.6	51.5
MGA_3864	LOCUS_38580	sequence1:4213489..4215147(-)	partial			WP_000615086.1	alpha/beta fold hydrolase	99.6	49.1	32.9
MGA_3873	LOCUS_38670	sequence1:4223464..4224120(+)	partial			WP_005094761.1	hypothetical protein	79.4	67.3	46.2
MGA_3884	LOCUS_38780	sequence1:4234064..4235422(-)	frameshift		4235421	WP_003419334.1	PPE family protein	99.3	82.2	52.4
MGA_3885	LOCUS_38790	sequence1:4235383..4235637(-)	frameshift		4235421	WP_003419334.1	PPE family protein	98.8	15.0	50.6
MGA_3887	LOCUS_38810	sequence1:4235930..4237585(-)	partial			WP_003419334.1	PPE family protein	31.8	31.5	67.4
MGA_3900	LOCUS_38940	sequence1:4249815..4250195(-)	frameshift		4250173	WP_003419307.1	steroid 3-ketoacyl-CoA thiolase	96.0	30.9	95.9
MGA_3901	LOCUS_38950	sequence1:4250078..4250962(-)	frameshift		4250173	WP_003419307.1	steroid 3-ketoacyl-CoA thiolase	91.2	69.3	89.7
MGA_3939	LOCUS_39330	sequence1:4294235..4298434(-)	frameshift,internal_stop_codon	4297359..4297361(-),4297464..4297466(-),4297465..4297467(-),4297466..4297468(-)	4296771,4298505,4296714,4296336,4296468,4297557,4297753,4297370,4298457,4296284,4298472,4297704,4297514,4296556,4297078,4297017,4296762,4297343	WP_010950904.1	PE family protein	10.7	11.0	47.0
MGA_3967	LOCUS_39610	sequence1:4325134..4325712(+)	partial			WP_003418925.1	DUF2510 domain-containing protein	100.0	73.8	53.6
MGA_3969	LOCUS_39630	sequence1:4326987..4327337(+)	partial			WP_012259547.1	N-methyl-L-tryptophan oxidase	96.6	28.9	50.9
MGA_3977	LOCUS_39710	sequence1:4335900..4337717(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	53.6	55.5	75.0
MGA_3981	LOCUS_39750	sequence1:4342284..4342670(+)	frameshift		4342267	WP_011731432.1	IS1380-like element ISMsm10 family transposase	40.6	11.1	55.8
MGA_3985	LOCUS_39790	sequence1:4345038..4345637(-)	partial			WP_012257896.1	Fic family protein	98.0	49.5	40.3
MGA_3988	LOCUS_39820	sequence1:4347215..4347775(-)	partial			WP_012257896.1	Fic family protein	89.2	42.3	33.5
MGA_4009	LOCUS_40030	sequence1:4367114..4368715(-)	partial			WP_003899000.1	serine/threonine protein kinase PknF	67.7	80.3	52.0
MGA_4019	LOCUS_40130	sequence1:4380526..4381254(+)	internal_stop_codon	4380517..4380519(+)		WP_010886087.1	hypothetical protein	100.0	75.9	69.8
MGA_4022	LOCUS_40160	sequence1:4382467..4382907(-)	frameshift		4382932	WP_003403998.1	hypothetical protein	97.9	75.9	54.9
MGA_4041	LOCUS_40350	sequence1:4403995..4405500(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	56.3	44.8	32.0
MGA_4050	LOCUS_40440	sequence1:4413465..4414088(+)	partial			WP_029104396.1	phosphate ABC transporter permease PstA	64.3	43.8	70.7
MGA_4064	LOCUS_40580	sequence1:4425922..4426599(-)	partial			WP_003900450.1	hypothetical protein	69.8	69.3	32.7
MGA_4067	LOCUS_40610	sequence1:4428207..4428587(-)	frameshift		4428275,4428297,4428519,4428543	WP_003416640.1	ATP-binding protein	99.2	28.4	60.0
MGA_4075	LOCUS_40690	sequence1:4436108..4437604(+)	partial			WP_011228162.1	glycosyltransferase	77.9	64.1	44.6
MGA_4082	LOCUS_40760	sequence1:4444209..4445525(+)	partial			WP_013226635.1	ATP-grasp domain-containing protein	59.1	60.0	29.8
MGA_4089	LOCUS_40830	sequence1:4455182..4456024(-)	internal_stop_codon	4456043..4456045(-)		WP_005112610.1	hypothetical protein	97.5	58.8	37.5
MGA_4090	LOCUS_40840	sequence1:4456043..4456519(-)	internal_stop_codon	4456043..4456045(-)		WP_036462713.1	hypothetical protein	97.5	34.1	47.1
MGA_4092	LOCUS_40860	sequence1:4458157..4459677(-)	partial			WP_011085648.1	adenylate/guanylate cyclase domain-containing protein	68.8	82.4	34.5
MGA_4093	LOCUS_40870	sequence1:4459853..4460914(+)	partial			WP_162445741.1	sensor histidine kinase	81.9	25.3	46.4
MGA_4094	LOCUS_40880	sequence1:4460941..4462239(+)	partial			WP_011085646.1	ATP-binding protein	67.8	35.2	32.2
MGA_4106	LOCUS_41000	sequence1:4476243..4477940(-)	partial			WP_003899060.1	MDR family MFS transporter	89.2	72.9	59.5
MGA_4111	LOCUS_41050	sequence1:4489458..4489673(+)	partial			WP_003899285.1	phospholipase C	84.5	11.7	68.3
MGA_4114	LOCUS_41080	sequence1:4492037..4493557(-)	frameshift		4492288,4492290,4492291,4492294,4492103,4492728,4491913,4491915,4492239,4492242,4492180,4492309,4492119,4492120,4492127,4492191,4492132,4492196,4492006,4492007,4492070,4492009,4491946,4492011,4492014,4492081,4492083,4492084,4492216,4491960	WP_010886118.1	PE family protein	24.1	16.5	41.0
MGA_4117	LOCUS_41110	sequence1:4495733..4496044(+)	partial			WP_003404760.1	IS607-like element IS1535 family transposase	71.8	38.3	82.4
MGA_4120	LOCUS_41140	sequence1:4498372..4498620(-)	frameshift,internal_stop_codon	4498372..4498374(-)	4498365	WP_003900088.1	PPE family protein	100.0	14.1	65.9
MGA_4121	LOCUS_41150	sequence1:4499270..4499731(+)	frameshift		4499648,4500000,4499611	WP_005765719.1	alpha/beta fold hydrolase	61.4	28.8	38.9
MGA_4122	LOCUS_41160	sequence1:4499692..4500006(+)	frameshift		4500004,4499671	WP_003113577.1	alpha/beta fold hydrolase	99.0	31.5	31.8
