# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00020	sequence1:788..1180(-)	frameshift		1229,1238,887	WP_003407520.1	hypothetical protein	73.8	51.6	80.2
MGA_3	LOCUS_00030	sequence1:1548..1916(+)	frameshift		2012,1892,2135	WP_111481143.1	aconitate hydratase	94.3	12.4	87.2
MGA_4	LOCUS_00040	sequence1:3112..4356(+)	frameshift		3115	WP_003898889.1	iron-regulated aconitate hydratase Acn	99.5	43.7	90.8
MGA_7	LOCUS_00070	sequence1:5240..5470(-)	frameshift		5499,5493	WP_003894527.1	ABC-F family ATP-binding cassette domain-containing protein	100.0	14.0	96.1
MGA_8	LOCUS_00080	sequence1:5353..6360(-)	frameshift		5497,6370,6373	WP_003407507.1	macrolide ABC transporter ATP-binding protein	85.1	52.6	83.2
MGA_10	LOCUS_00100	sequence1:6884..7432(-)	frameshift		7469	WP_003898888.1	enoyl-CoA hydratase	99.5	63.5	87.3
MGA_11	LOCUS_00110	sequence1:8062..8730(+)	frameshift		8676	WP_003899707.1	trehalose-2-sulfate acyltransferase	86.5	40.8	57.3
MGA_12	LOCUS_00120	sequence1:8805..9506(+)	frameshift		8676	WP_003898759.1	acyltransferase PapA3	91.8	45.8	52.8
MGA_13	LOCUS_00130	sequence1:9507..9707(-)	frameshift		9712	WP_003894525.1	thioredoxin	100.0	53.2	81.8
MGA_81	LOCUS_00810	sequence1:81386..81703(-)	internal_stop_codon	81728..81730(-),81725..81727(-)		WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	86.7
MGA_90	LOCUS_00900	sequence1:91592..92020(+)	partial			WP_009936020.1	HNH endonuclease signature motif containing protein	85.2	25.5	81.8
MGA_91	LOCUS_00910	sequence1:91963..92460(+)	partial			WP_009936020.1	HNH endonuclease signature motif containing protein	81.8	28.4	83.0
MGA_121	LOCUS_01210	sequence1:122815..123843(+)	partial			WP_003899377.1	DUF2189 domain-containing protein	70.5	79.7	43.5
MGA_142	LOCUS_01420	sequence1:144415..146118(+)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	61.6	58.7	48.7
MGA_145	LOCUS_01450	sequence1:149180..150253(-)	partial			WP_003899159.1	hypothetical protein	55.7	61.0	41.8
MGA_149	LOCUS_01490	sequence1:153851..155704(-)	partial			WP_010907751.1	protein translocase subunit SecD	61.8	66.4	79.5
MGA_150	LOCUS_01500	sequence1:155777..156094(-)	partial			WP_003413391.1	preprotein translocase subunit YajC	73.3	67.0	89.6
MGA_153	LOCUS_01530	sequence1:161220..161876(-)	partial			WP_011728720.1	hypothetical protein	78.4	71.5	56.7
MGA_154	LOCUS_01540	sequence1:162119..163678(+)	frameshift		163675	WP_010950451.1	PE family protein	28.5	17.9	53.0
MGA_189	LOCUS_01890	sequence1:190291..190680(-)	internal_stop_codon	190684..190686(-)		WP_003243359.1	dihydroanticapsin 7-dehydrogenase	89.1	46.6	44.5
MGA_190	LOCUS_01900	sequence1:190684..191196(-)	internal_stop_codon	190684..190686(-)		WP_013230777.1	SDR family oxidoreductase	67.1	47.1	43.0
MGA_199	LOCUS_01990	sequence1:201470..201787(-)	partial			WP_010907871.1	DUF732 domain-containing protein	88.6	61.4	34.7
MGA_301	LOCUS_03010	sequence1:293341..293676(+)	partial			WP_004114894.1	hypothetical protein	63.1	56.0	39.4
MGA_326	LOCUS_03260	sequence1:318167..320926(-)	partial			WP_003899505.1	translation initiation factor IF-2	67.8	69.2	92.9
MGA_392	LOCUS_03920	sequence1:381061..381618(-)	partial			WP_011727224.1	MPT63 family protein	70.8	36.5	44.3
MGA_397	LOCUS_03970	sequence1:385517..386008(+)	partial			WP_003414678.1	M23 family metallopeptidase	96.9	63.5	81.0
MGA_399	LOCUS_03990	sequence1:386318..386647(-)	frameshift		386456,386657,386789	WP_011921673.1	IS110 family transposase	55.0	15.5	61.7
MGA_400	LOCUS_04000	sequence1:386754..387299(-)	frameshift		386789	WP_224497204.1	IS110 family transposase	95.0	38.7	38.7
MGA_418	LOCUS_04180	sequence1:401560..402072(-)	partial			WP_003414731.1	30S ribosomal protein S16	70.0	73.5	89.1
MGA_435	LOCUS_04350	sequence1:419442..420410(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	99.4	55.7	31.5
MGA_463	LOCUS_04630	sequence1:474607..482004(-)	partial			WP_011026868.1	type I polyketide synthase	34.6	39.8	48.4
MGA_464	LOCUS_04640	sequence1:482028..489044(-)	internal_stop_codon	489032..489034(-)		WP_193484145.1	type I polyketide synthase	52.1	60.2	44.9
MGA_472	LOCUS_04720	sequence1:496375..496536(-)	frameshift,internal_stop_codon	496533..496535(-)	496526	WP_003413686.1	ACR3 family arsenite efflux transporter	92.5	9.8	85.7
MGA_473	LOCUS_04730	sequence1:496533..497633(-)	frameshift,internal_stop_codon	496533..496535(-)	496526	WP_010950755.1	ACR3 family arsenite efflux transporter	98.1	72.1	80.8
MGA_490	LOCUS_04900	sequence1:514542..515192(-)	internal_stop_codon	514542..514544(-)		WP_003415107.1	DNA-binding protein HupB	50.0	50.5	96.3
MGA_511	LOCUS_05110	sequence1:538100..538339(+)	frameshift		538064	WP_003900997.1	siderophore RND transporter MmpL5	77.2	6.3	72.1
MGA_516	LOCUS_05160	sequence1:542063..542635(-)	partial			WP_012804753.1	TetR/AcrR family transcriptional regulator	31.1	26.8	55.9
MGA_520	LOCUS_05200	sequence1:547145..547756(+)	partial			WP_003415270.1	sensor domain-containing protein	76.4	73.2	60.6
MGA_547	LOCUS_05470	sequence1:573621..573866(-)	frameshift,internal_stop_codon	573870..573872(-)	574035	WP_003401383.1	type II toxin-antitoxin system prevent-host-death family antitoxin	95.1	45.6	63.6
MGA_568	LOCUS_05680	sequence1:592601..593146(+)	frameshift		593227,593110	WP_224497204.1	IS110 family transposase	95.0	38.7	38.7
MGA_572	LOCUS_05720	sequence1:595972..597081(-)	partial			WP_003415989.1	FCD domain-containing protein	92.1	72.7	69.9
MGA_573	LOCUS_05730	sequence1:597115..598308(-)	partial			WP_011730106.1	OB-fold domain-containing protein	98.7	69.3	43.7
MGA_574	LOCUS_05740	sequence1:598355..598705(+)	frameshift		598805,598702	WP_013228942.1	OB-fold domain-containing protein	90.5	19.6	46.7
MGA_586	LOCUS_05860	sequence1:611040..611282(+)	partial			WP_011404666.1	DUF433 domain-containing protein	77.5	63.9	41.9
MGA_592	LOCUS_05920	sequence1:615761..616612(+)	partial			WP_003405603.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	60.1	67.7	78.2
MGA_601	LOCUS_06010	sequence1:625479..626276(-)	partial			WP_038965382.1	SDR family NAD(P)-dependent oxidoreductase	74.3	76.1	38.4
MGA_615	LOCUS_06150	sequence1:639218..639409(-)	partial			WP_013228958.1	hypothetical protein	96.8	61.2	47.6
MGA_631	LOCUS_06310	sequence1:656686..657129(-)	partial			WP_013225198.1	MarR family transcriptional regulator	70.7	65.0	45.2
MGA_644	LOCUS_06440	sequence1:668126..668887(+)	partial			WP_011731410.1	SDR family NAD(P)-dependent oxidoreductase	74.3	74.3	34.0
MGA_652	LOCUS_06520	sequence1:675752..676375(-)	frameshift		675772	WP_011730637.1	diacylglycerol kinase	42.0	24.3	47.1
MGA_657	LOCUS_06570	sequence1:679413..680594(+)	partial			WP_011028858.1	site-specific integrase	58.8	59.4	27.5
MGA_664	LOCUS_06640	sequence1:686604..686870(+)	frameshift		686598	WP_011071113.1	IS1595-like element ISSod11 family transposase	64.8	17.9	57.9
MGA_680	LOCUS_06800	sequence1:700541..701161(-)	partial			WP_011728185.1	Fic family protein	99.5	51.0	70.7
MGA_684	LOCUS_06840	sequence1:704746..705183(-)	frameshift		704748	WP_011036809.1	recombinase family protein	83.4	64.4	51.2
MGA_687	LOCUS_06870	sequence1:707093..707635(-)	partial			WP_010886133.1	PE family protein	62.8	22.9	57.0
MGA_688	LOCUS_06880	sequence1:707691..709325(-)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	26.1	25.4	46.5
MGA_695	LOCUS_06950	sequence1:714599..715075(-)	partial			WP_003416124.1	hypothetical protein	42.4	46.9	63.8
MGA_732	LOCUS_07320	sequence1:752628..753563(-)	partial			WP_003906993.1	PPE family protein	92.6	49.7	46.8
MGA_741	LOCUS_07410	sequence1:762621..763145(-)	partial			WP_014878395.1	SDR family oxidoreductase	71.8	48.3	38.1
MGA_750	LOCUS_07500	sequence1:771477..772691(-)	partial			WP_064243032.1	AraC family transcriptional regulator	37.1	44.7	34.7
MGA_755	LOCUS_07550	sequence1:777279..777569(-)	partial			WP_005094656.1	DUF3349 domain-containing protein	84.4	69.9	56.8
MGA_757	LOCUS_07570	sequence1:778214..778825(+)	partial			WP_003813694.1	SDR family oxidoreductase	55.2	44.6	35.4
MGA_765	LOCUS_07650	sequence1:786608..788092(-)	partial			WP_013531947.1	molybdopterin-binding protein	38.9	71.9	43.3
MGA_767	LOCUS_07670	sequence1:788664..789650(+)	partial			WP_162139596.1	peptidylprolyl isomerase	39.3	41.2	35.4
MGA_781	LOCUS_07810	sequence1:807711..808286(-)	partial			WP_013224292.1	bifunctional GNAT family N-acetyltransferase/acetate--CoA ligase family protein	86.4	18.6	38.0
MGA_804	LOCUS_08040	sequence1:833287..833538(+)	partial			WP_044008278.1	helix-turn-helix domain-containing protein	73.5	73.5	49.2
MGA_809	LOCUS_08090	sequence1:837549..838655(-)	frameshift		838669	WP_011727513.1	IS1634-like element ISMsm6 family transposase	100.0	67.5	83.4
MGA_819	LOCUS_08190	sequence1:845464..845850(-)	partial			WP_012259444.1	HIT family protein	78.1	74.1	43.0
MGA_826	LOCUS_08260	sequence1:850583..851209(-)	internal_stop_codon	851228..851230(-)		WP_003405605.1	hypothetical protein	39.9	64.3	57.8
MGA_889	LOCUS_08890	sequence1:919623..920225(+)	partial			WP_003899957.1	RES family NAD+ phosphorylase	58.5	56.3	34.1
MGA_908	LOCUS_09080	sequence1:938158..938529(-)	frameshift		938620	WP_003420405.1	hypothetical protein	83.7	34.8	76.7
MGA_927	LOCUS_09270	sequence1:959503..959940(+)	partial			WP_003411888.1	hypothetical protein	64.1	83.6	44.1
MGA_932	LOCUS_09320	sequence1:963482..964180(+)	frameshift,internal_stop_codon	963474..963476(+)	963401	WP_003899998.1	GtrA family protein	100.0	82.0	80.6
MGA_940	LOCUS_09400	sequence1:972406..972639(+)	partial			WP_010886160.1	acyl-CoA carboxylase subunit epsilon	100.0	42.9	66.2
MGA_948	LOCUS_09480	sequence1:978363..978674(-)	frameshift		978702	WP_003417162.1	protein UsfY	99.0	74.5	73.5
MGA_961	LOCUS_09610	sequence1:993710..994063(+)	partial			WP_003406566.1	DUF732 domain-containing protein	69.2	71.7	43.2
MGA_962	LOCUS_09620	sequence1:994332..994676(+)	partial			WP_003406566.1	DUF732 domain-containing protein	64.0	64.6	41.1
MGA_979	LOCUS_09790	sequence1:1017912..1018985(+)	partial			WP_003907154.1	type VII secretion system ESX-2 AAA family ATPase EccA2	82.4	48.0	27.9
MGA_980	LOCUS_09800	sequence1:1020364..1021767(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	11.6	9.4	50.9
MGA_982	LOCUS_09820	sequence1:1023348..1024418(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	91.3	57.1	29.9
MGA_984	LOCUS_09840	sequence1:1026309..1027706(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	33.3	26.0	29.8
MGA_986	LOCUS_09860	sequence1:1029381..1030448(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	78.0	50.0	31.7
MGA_989	LOCUS_09890	sequence1:1034510..1035586(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	81.3	51.9	31.6
MGA_992	LOCUS_09920	sequence1:1039612..1040688(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	91.3	57.1	30.6
MGA_1007	LOCUS_10070	sequence1:1053207..1053791(+)	partial			WP_003905037.1	IS110 family transposase	97.9	33.3	80.5
MGA_1023	LOCUS_10230	sequence1:1070961..1071380(-)	frameshift		1071394	WP_003906521.1	HNH endonuclease signature motif containing protein	89.9	27.5	73.6
MGA_1024	LOCUS_10240	sequence1:1071377..1072333(-)	frameshift		1071394	WP_003405897.1	HNH endonuclease signature motif containing protein	97.8	69.0	58.5
MGA_1026	LOCUS_10260	sequence1:1074101..1074730(+)	partial			WP_010907871.1	DUF732 domain-containing protein	61.7	82.3	48.5
MGA_1064	LOCUS_10640	sequence1:1120818..1121615(-)	partial			WP_003418011.1	anti-sigma D factor RsdA	80.4	70.2	64.3
MGA_1068	LOCUS_10680	sequence1:1123932..1124354(+)	partial			WP_003900449.1	type II toxin-antitoxin system RelE/ParE family toxin	99.3	64.7	45.3
MGA_1069	LOCUS_10690	sequence1:1124351..1124659(+)	partial			WP_034284194.1	helix-turn-helix domain-containing protein	81.4	68.3	44.6
MGA_1079	LOCUS_10790	sequence1:1132559..1133179(-)	frameshift		1132579	WP_010907694.1	bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB/ribosomal protein alanine acetyltransferase RimI	99.0	57.7	74.9
MGA_1104	LOCUS_11040	sequence1:1159624..1160175(-)	partial			WP_010908642.1	50S ribosomal protein L17	73.8	79.4	90.4
MGA_1133	LOCUS_11330	sequence1:1184720..1185406(+)	frameshift		1185341,1184717	WP_011727513.1	IS1634-like element ISMsm6 family transposase	96.5	39.8	80.0
MGA_1134	LOCUS_11340	sequence1:1185387..1185824(+)	frameshift		1185340	WP_011727513.1	IS1634-like element ISMsm6 family transposase	100.0	26.6	83.4
MGA_1135	LOCUS_11350	sequence1:1186113..1186778(+)	partial			WP_011389739.1	Abi family protein	88.2	72.8	30.3
MGA_1141	LOCUS_11410	sequence1:1190692..1191519(-)	partial			WP_013229868.1	AraC family transcriptional regulator	35.3	35.3	43.3
MGA_1166	LOCUS_11660	sequence1:1207528..1207899(-)	partial			WP_003898560.1	30S ribosomal protein S17	70.7	64.4	94.3
MGA_1177	LOCUS_11770	sequence1:1213910..1214665(+)	frameshift,internal_stop_codon	1214468..1214470(+)	1214203	WP_003910446.1	PE family protein	33.9	13.1	56.5
MGA_1192	LOCUS_11920	sequence1:1229172..1229558(-)	partial			WP_010886090.1	PE family protein	89.8	13.0	47.8
MGA_1249	LOCUS_12490	sequence1:1293201..1294445(-)	partial			WP_010950570.1	PE domain-containing protein	44.7	20.6	31.2
MGA_1250	LOCUS_12500	sequence1:1295794..1296138(+)	partial			WP_003404754.1	DUF1778 domain-containing protein	71.9	53.2	41.7
MGA_1274	LOCUS_12740	sequence1:1322066..1323502(-)	partial			WP_011036463.1	DegQ family serine endoprotease	28.7	27.8	28.7
MGA_1303	LOCUS_13030	sequence1:1350018..1351622(-)	partial			WP_003911223.1	hypothetical protein	66.1	64.2	52.8
MGA_1308	LOCUS_13080	sequence1:1356056..1356331(-)	partial			WP_010908877.1	DUF4229 domain-containing protein	84.6	69.4	68.8
MGA_1364	LOCUS_13640	sequence1:1406118..1407128(+)	partial			WP_003402327.1	hypothetical protein	33.6	69.1	71.7
MGA_1393	LOCUS_13930	sequence1:1437419..1437610(-)	partial			WP_011727266.1	VOC family protein	90.5	46.8	72.9
MGA_1402	LOCUS_14020	sequence1:1445625..1445993(+)	frameshift		1445916,1445589	WP_011727834.1	NAD(P)/FAD-dependent oxidoreductase	77.9	24.9	40.6
MGA_1403	LOCUS_14030	sequence1:1445920..1446585(+)	frameshift		1445909	WP_011205212.1	FAD-dependent oxidoreductase	90.0	38.0	31.3
MGA_1405	LOCUS_14050	sequence1:1448648..1449931(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	33.3	23.8	30.4
MGA_1407	LOCUS_14070	sequence1:1451412..1451735(-)	frameshift		1451770	WP_011727856.1	IS256 family transposase	100.0	24.4	86.0
MGA_1408	LOCUS_14080	sequence1:1451690..1452289(-)	frameshift		1452288,1451772	WP_011727856.1	IS256 family transposase	86.4	39.2	91.3
MGA_1409	LOCUS_14090	sequence1:1452262..1452726(-)	frameshift		1452291	WP_011727856.1	IS256 family transposase	94.8	33.5	83.0
MGA_1410	LOCUS_14100	sequence1:1452954..1454021(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	78.0	50.0	31.0
MGA_1411	LOCUS_14110	sequence1:1455352..1456713(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	12.6	9.2	47.4
MGA_1413	LOCUS_14130	sequence1:1458212..1459261(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	76.5	46.3	34.3
MGA_1414	LOCUS_14140	sequence1:1460679..1462028(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	30.7	23.5	30.0
MGA_1416	LOCUS_14160	sequence1:1463660..1464787(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	72.3	47.6	35.6
MGA_1441	LOCUS_14410	sequence1:1486719..1487321(+)	partial			WP_011031656.1	hypothetical protein	58.5	80.0	47.1
MGA_1453	LOCUS_14530	sequence1:1499863..1500105(-)	partial			WP_013228393.1	DUF2752 domain-containing protein	100.0	53.0	50.0
MGA_1477	LOCUS_14770	sequence1:1522601..1522792(-)	frameshift		1522821	WP_029104282.1	HNH endonuclease signature motif containing protein	98.4	13.1	45.2
MGA_1522	LOCUS_15220	sequence1:1565309..1566478(-)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	81.0	54.4	33.0
MGA_1525	LOCUS_15250	sequence1:1570554..1571636(-)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	90.8	57.1	29.1
MGA_1527	LOCUS_15270	sequence1:1573138..1574463(-)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	29.9	21.2	30.8
MGA_1533	LOCUS_15330	sequence1:1581979..1584207(-)	partial			WP_003901837.1	isoniazid-induced protein IniB	27.5	33.2	29.9
MGA_1544	LOCUS_15440	sequence1:1597338..1598837(-)	partial			WP_011727115.1	hypothetical protein	68.5	59.4	47.4
MGA_1545	LOCUS_15450	sequence1:1598859..1600091(-)	partial			WP_011727115.1	hypothetical protein	74.1	59.8	42.9
MGA_1546	LOCUS_15460	sequence1:1600260..1601753(-)	partial			WP_011727115.1	hypothetical protein	69.0	58.2	45.4
MGA_1547	LOCUS_15470	sequence1:1602008..1603882(-)	partial			WP_011727115.1	hypothetical protein	57.5	63.9	44.3
MGA_1552	LOCUS_15520	sequence1:1607081..1608370(-)	partial			WP_162470631.1	tyrosine-type recombinase/integrase	44.8	32.3	26.5
MGA_1556	LOCUS_15560	sequence1:1610382..1610966(+)	partial			WP_004112525.1	DUF4065 domain-containing protein	60.8	49.6	26.0
MGA_1557	LOCUS_15570	sequence1:1611222..1613132(+)	partial			WP_011727115.1	hypothetical protein	56.0	63.2	39.4
MGA_1565	LOCUS_15650	sequence1:1619157..1619795(+)	partial			WP_005083648.1	hypothetical protein	72.6	80.9	52.2
MGA_1569	LOCUS_15690	sequence1:1621987..1623909(-)	partial			WP_003401607.1	Hsp70 family protein	72.7	75.8	63.3
MGA_1601	LOCUS_16010	sequence1:1657890..1659674(-)	partial			WP_003401347.1	PPE family protein	38.0	39.9	61.4
MGA_1666	LOCUS_16660	sequence1:1732484..1732939(-)	partial			WP_011173685.1	nucleotidyltransferase family protein	49.7	78.9	49.3
MGA_1671	LOCUS_16710	sequence1:1740616..1740960(+)	partial			WP_003401875.1	LysR family transcriptional regulator	36.8	13.1	76.2
MGA_1672	LOCUS_16720	sequence1:1740947..1742206(-)	partial			WP_010886125.1	PE domain-containing protein	49.2	22.7	29.2
MGA_1677	LOCUS_16770	sequence1:1745970..1747214(-)	partial			WP_010886125.1	PE domain-containing protein	45.2	20.7	27.2
MGA_1685	LOCUS_16850	sequence1:1755441..1755872(+)	partial			WP_013228394.1	CD225/dispanin family protein	62.2	82.6	42.4
MGA_1706	LOCUS_17060	sequence1:1781297..1782313(-)	partial			WP_003916225.1	L,D-transpeptidase LdtMt4	74.9	68.9	67.2
MGA_1716	LOCUS_17160	sequence1:1792086..1792589(+)	frameshift		1792030	WP_003401110.1	sigma-70 family RNA polymerase sigma factor SigG	70.1	31.6	73.5
MGA_1740	LOCUS_17400	sequence1:1816726..1817100(+)	partial			WP_003901078.1	IS256-like element IS1081 family transposase	83.9	25.1	76.9
MGA_1742	LOCUS_17420	sequence1:1819620..1821017(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	22.2	18.8	32.7
MGA_1744	LOCUS_17440	sequence1:1822528..1823583(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	68.4	42.7	35.5
MGA_1745	LOCUS_17450	sequence1:1824843..1826174(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	30.7	21.9	29.9
MGA_1749	LOCUS_17490	sequence1:1829436..1830482(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	67.8	42.7	35.1
MGA_1750	LOCUS_17500	sequence1:1831685..1833019(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	12.8	9.2	47.4
MGA_1752	LOCUS_17520	sequence1:1834614..1835594(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	94.5	54.0	32.6
MGA_1755	LOCUS_17550	sequence1:1839792..1841114(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	64.5	49.1	32.9
MGA_1766	LOCUS_17660	sequence1:1851426..1851752(-)	partial			WP_003414177.1	DUF1778 domain-containing protein	85.2	64.5	36.0
MGA_1775	LOCUS_17750	sequence1:1860126..1860551(+)	partial			WP_011726722.1	hypothetical protein	81.6	62.8	59.1
MGA_1799	LOCUS_17990	sequence1:1887498..1888061(-)	partial			WP_003400961.1	TetR/AcrR family transcriptional regulator	100.0	66.8	64.7
MGA_1821	LOCUS_18210	sequence1:1906834..1907619(+)	partial			WP_003899826.1	F420-dependent hydroxymycolic acid dehydrogenase	85.4	61.9	78.0
MGA_1822	LOCUS_18220	sequence1:1907624..1908076(+)	partial			WP_013228640.1	AraC family transcriptional regulator	65.3	35.9	48.0
MGA_1839	LOCUS_18390	sequence1:1924172..1924630(-)	partial			WP_013228531.1	nuclear transport factor 2 family protein	63.8	71.2	49.5
MGA_1870	LOCUS_18700	sequence1:1963594..1965192(-)	partial			WP_013227752.1	AMP-binding protein	96.6	74.6	39.2
MGA_1888	LOCUS_18880	sequence1:1982901..1983524(-)	partial			WP_011728871.1	TetR/AcrR family transcriptional regulator	70.5	68.7	29.7
MGA_1889	LOCUS_18890	sequence1:1983643..1984302(+)	partial			WP_030868049.1	TetR/AcrR family transcriptional regulator	57.1	65.5	31.8
MGA_1891	LOCUS_18910	sequence1:1985006..1985479(-)	partial			WP_003400664.1	SRPBCC family protein	99.4	69.6	77.6
MGA_1895	LOCUS_18950	sequence1:1989085..1989495(-)	partial			WP_013224025.1	MarR family winged helix-turn-helix transcriptional regulator	81.6	72.1	30.6
MGA_1940	LOCUS_19400	sequence1:2036883..2037455(-)	partial			WP_011729720.1	bifunctional RNase H/acid phosphatase	75.3	41.9	37.3
MGA_1948	LOCUS_19480	sequence1:2044356..2045156(+)	partial			WP_011024252.1	NADH-quinone oxidoreductase subunit B family protein	45.5	71.2	47.9
MGA_1953	LOCUS_19530	sequence1:2050768..2051013(-)	partial			WP_003895160.1	cytochrome b	63.0	26.6	62.7
MGA_1954	LOCUS_19540	sequence1:2051018..2051716(-)	partial			WP_014877796.1	catalase family peroxidase	89.7	57.7	50.7
MGA_1956	LOCUS_19560	sequence1:2053711..2055054(+)	partial			WP_010920958.1	aromatic ring-hydroxylating dioxygenase subunit alpha	45.2	50.5	33.3
MGA_1977	LOCUS_19770	sequence1:2078495..2079568(-)	partial			WP_010972050.1	GGDEF domain-containing protein	48.2	61.3	38.4
MGA_1978	LOCUS_19780	sequence1:2079803..2080645(+)	partial			WP_067118245.1	LLM class F420-dependent oxidoreductase	66.4	65.0	38.8
MGA_1981	LOCUS_19810	sequence1:2082652..2083248(-)	partial			WP_011084785.1	type II toxin-antitoxin system HipA family toxin	93.4	41.7	31.1
MGA_1985	LOCUS_19850	sequence1:2086768..2087700(-)	internal_stop_codon	2087791..2087793(-)		WP_003400562.1	glycoside hydrolase family 6 protein	99.4	82.1	68.3
MGA_1993	LOCUS_19930	sequence1:2095532..2096443(-)	partial			WP_010867517.1	CDC48 family AAA ATPase	83.2	28.9	27.1
MGA_2003	LOCUS_20030	sequence1:2103287..2104675(-)	partial			WP_005112775.1	TniQ family protein	95.9	51.8	36.3
MGA_2027	LOCUS_20270	sequence1:2132323..2133375(+)	partial			WP_003900793.1	LpqN/LpqT family lipoprotein	62.9	68.7	70.0
MGA_2047	LOCUS_20470	sequence1:2145737..2146897(+)	partial			WP_003899159.1	hypothetical protein	57.5	70.9	39.5
MGA_2061	LOCUS_20610	sequence1:2156238..2157701(+)	partial			WP_066878031.1	ThiF family adenylyltransferase	12.3	10.4	50.0
MGA_2067	LOCUS_20670	sequence1:2168102..2169256(-)	partial			WP_200386714.1	hypothetical protein	43.8	33.8	40.1
MGA_2085	LOCUS_20850	sequence1:2186739..2187959(-)	partial			WP_010886125.1	PE domain-containing protein	69.5	30.3	26.2
MGA_2089	LOCUS_20890	sequence1:2194860..2195354(-)	partial			WP_003420504.1	helix-turn-helix domain-containing protein	61.6	78.5	37.3
MGA_2113	LOCUS_21130	sequence1:2225273..2225734(-)	partial			WP_003400124.1	NUDIX domain-containing protein	100.0	61.7	82.4
MGA_2138	LOCUS_21380	sequence1:2256259..2257305(-)	partial			WP_003399818.1	MinD/ParA family protein	83.6	74.9	76.0
MGA_2153	LOCUS_21530	sequence1:2279542..2279967(-)	partial			WP_003399779.1	histone-like protein Hns	40.4	42.5	61.4
MGA_2162	LOCUS_21620	sequence1:2287142..2288086(-)	partial			WP_235624060.1	LCP family protein	94.6	70.1	71.0
MGA_2167	LOCUS_21670	sequence1:2291063..2291413(-)	internal_stop_codon	2291063..2291065(-)		WP_003899719.1	metallopeptidase family protein	99.1	83.9	76.5
MGA_2182	LOCUS_21820	sequence1:2308420..2308971(-)	frameshift		2308515	WP_003420801.1	exported repetitive protein	69.4	52.5	46.3
MGA_2239	LOCUS_22380	sequence1:2378826..2380106(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	33.3	23.8	29.7
MGA_2241	LOCUS_22400	sequence1:2381654..2382736(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	90.8	57.1	30.0
MGA_2242	LOCUS_22410	sequence1:2384149..2385492(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	30.9	23.5	29.3
MGA_2244	LOCUS_22430	sequence1:2387118..2388140(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	77.6	46.9	35.3
MGA_2245	LOCUS_22440	sequence1:2389431..2390771(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	41.3	33.6	26.5
MGA_2247	LOCUS_22460	sequence1:2392193..2393338(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	82.9	54.0	31.9
MGA_2249	LOCUS_22480	sequence1:2394663..2394884(-)	partial			WP_010908859.1	DUF1049 domain-containing protein	74.0	47.8	72.2
MGA_2260	LOCUS_22590	sequence1:2402988..2403587(+)	partial			WP_003526832.1	DUF6088 family protein	37.7	39.1	39.0
MGA_2262	LOCUS_22610	sequence1:2403794..2404390(-)	frameshift		2404392	WP_011727856.1	IS256 family transposase	100.0	45.1	89.9
MGA_2270	LOCUS_22690	sequence1:2411706..2412962(+)	partial			WP_011030050.1	MBL fold metallo-hydrolase	56.9	68.7	30.5
MGA_2273	LOCUS_22720	sequence1:2414229..2415200(+)	partial			WP_013222574.1	LLM class flavin-dependent oxidoreductase	49.5	47.8	31.6
MGA_2311	LOCUS_23100	sequence1:2455078..2456961(+)	partial			WP_003420417.1	DNA polymerase III subunits gamma/tau	61.7	67.0	89.4
MGA_2331	LOCUS_23300	sequence1:2480759..2481217(+)	partial			WP_003419814.1	hypothetical protein	37.5	44.2	50.9
MGA_2351	LOCUS_23500	sequence1:2499686..2500849(-)	internal_stop_codon	2500865..2500867(-)		WP_003419768.1	membrane protein	86.8	76.3	61.9
MGA_2357	LOCUS_23560	sequence1:2505258..2507474(-)	partial			WP_013227688.1	SpoIIE family protein phosphatase	84.7	45.7	42.5
MGA_2363	LOCUS_23620	sequence1:2510424..2510744(+)	partial			WP_005079520.1	DUF6328 family protein	68.9	40.1	80.8
MGA_2399	LOCUS_23980	sequence1:2544632..2545003(+)	partial			WP_003899621.1	pilus assembly protein TadG-related protein	48.8	56.1	56.7
MGA_2437	LOCUS_24360	sequence1:2587992..2588219(+)	partial			WP_005065012.1	CbtB-domain containing protein	58.7	64.7	77.3
MGA_2510	LOCUS_25090	sequence1:2658029..2659213(+)	partial			WP_003906993.1	PPE family protein	62.4	43.1	42.9
MGA_2549	LOCUS_25480	sequence1:2696830..2697120(+)	partial			WP_084163556.1	DivIVA domain-containing protein	58.3	17.3	83.9
MGA_2615	LOCUS_26140	sequence1:2755793..2756527(+)	internal_stop_codon	2755784..2755786(+)		WP_010886087.1	hypothetical protein	100.0	75.9	72.1
MGA_2619	LOCUS_26180	sequence1:2758665..2758832(+)	partial			WP_005080756.1	VOC family protein	100.0	39.3	69.1
MGA_2624	LOCUS_26230	sequence1:2763242..2763913(-)	frameshift		2763938	WP_011728203.1	TetR/AcrR family transcriptional regulator	89.2	44.9	57.3
MGA_2625	LOCUS_26240	sequence1:2763936..2764631(-)	frameshift		2763938	WP_011728203.1	TetR/AcrR family transcriptional regulator	91.8	48.8	63.2
MGA_2666	LOCUS_26650	sequence1:2804999..2805439(+)	partial			WP_214391123.1	choline dehydrogenase	93.2	23.9	35.5
MGA_2667	LOCUS_26660	sequence1:2805482..2806762(-)	internal_stop_codon	2806790..2806792(-)		WP_003411663.1	cytochrome P450	92.3	80.4	35.5
MGA_2671	LOCUS_26700	sequence1:2810883..2811410(+)	partial			WP_003409522.1	alcohol dehydrogenase family protein	94.9	48.7	52.7
MGA_2682	LOCUS_26810	sequence1:2822154..2823053(-)	partial			WP_013230180.1	SDR family oxidoreductase	95.0	51.5	43.1
MGA_2684	LOCUS_26830	sequence1:2824001..2827249(-)	partial			WP_012701136.1	non-ribosomal peptide synthetase	57.7	14.4	38.6
MGA_2735	LOCUS_27340	sequence1:2879107..2879382(-)	partial			WP_005111160.1	DUF4190 domain-containing protein	75.8	43.8	40.0
MGA_2772	LOCUS_27710	sequence1:2911514..2912575(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	66.6	41.8	36.2
MGA_2775	LOCUS_27740	sequence1:2916551..2917792(+)	partial			WP_010950570.1	PE domain-containing protein	42.9	19.9	25.9
MGA_2776	LOCUS_27750	sequence1:2917963..2919039(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	78.2	50.0	31.4
MGA_2779	LOCUS_27780	sequence1:2923190..2924248(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	92.6	58.0	28.4
MGA_2795	LOCUS_27940	sequence1:2941024..2941482(-)	partial			WP_003407152.1	membrane protein	98.7	68.6	56.3
MGA_2796	LOCUS_27950	sequence1:2941581..2942330(-)	partial			WP_011730075.1	membrane protein	78.7	63.7	39.8
MGA_2798	LOCUS_27970	sequence1:2942927..2943208(-)	partial			WP_003417257.1	pilin structural subunit Mtp	68.8	60.2	57.8
MGA_2831	LOCUS_28300	sequence1:2975273..2975569(-)	partial			WP_011391158.1	helix-turn-helix transcriptional regulator	73.5	78.4	48.7
MGA_2837	LOCUS_28360	sequence1:2980531..2980746(-)	partial			WP_003895797.1	type II toxin-antitoxin system PemK/MazF family toxin	97.2	65.1	47.9
MGA_2848	LOCUS_28470	sequence1:2989039..2989944(-)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	57.5	40.8	66.5
MGA_2874	LOCUS_28730	sequence1:3011576..3012274(+)	partial			WP_003404684.1	peptidoglycan-binding protein ArfA	100.0	67.5	59.6
MGA_2882	LOCUS_28810	sequence1:3018796..3019338(+)	partial			WP_015287949.1	serine hydrolase	74.4	25.9	73.0
MGA_2888	LOCUS_28870	sequence1:3024381..3025574(+)	partial			WP_197492487.1	DUF4185 domain-containing protein	88.9	66.2	81.9
MGA_2892	LOCUS_28910	sequence1:3028367..3029098(-)	partial			WP_011141333.1	hypothetical protein	56.4	73.9	29.5
MGA_2912	LOCUS_29110	sequence1:3050771..3051676(-)	partial			WP_011730613.1	diiron oxygenase	100.0	73.1	74.1
MGA_2917	LOCUS_29160	sequence1:3056089..3056349(-)	partial			WP_010907562.1	chorismate mutase	86.0	70.5	79.7
MGA_2931	LOCUS_29300	sequence1:3072421..3072849(+)	partial			WP_005086809.1	hypothetical protein	88.0	73.6	40.3
MGA_2935	LOCUS_29340	sequence1:3078239..3079498(+)	frameshift		3078077	WP_003411663.1	cytochrome P450	99.0	84.9	82.9
MGA_2951	LOCUS_29500	sequence1:3096130..3096447(-)	partial			WP_010907580.1	zinc ribbon domain-containing protein	63.8	67.7	85.1
MGA_2966	LOCUS_29640	sequence1:3107813..3109102(-)	partial			WP_003898584.1	cytochrome P450	71.1	73.9	45.6
MGA_2968	LOCUS_29660	sequence1:3109847..3111019(+)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	54.6	53.5	31.9
MGA_2979	LOCUS_29770	sequence1:3121975..3122889(-)	partial			WP_003910253.1	hypothetical protein	68.8	57.0	23.3
MGA_2987	LOCUS_29850	sequence1:3135100..3135348(+)	partial			WP_003899556.1	[alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 2'''-O-methyltransferase	100.0	33.7	76.8
MGA_2990	LOCUS_29880	sequence1:3137963..3138895(+)	partial			WP_012258924.1	glycosyl hydrolase	87.7	44.8	32.5
MGA_2991	LOCUS_29890	sequence1:3138957..3139763(-)	partial			WP_000651232.1	class I SAM-dependent methyltransferase	44.8	50.0	29.5
MGA_2992	LOCUS_29900	sequence1:3139965..3140768(-)	partial			WP_011403392.1	NAD-dependent epimerase/dehydratase family protein	96.6	67.1	65.9
MGA_2994	LOCUS_29920	sequence1:3141442..3142713(+)	partial			WP_003900811.1	acyltransferase family protein	82.0	53.1	29.8
MGA_3003	LOCUS_30010	sequence1:3153586..3154998(-)	partial			WP_003901258.1	PPE family protein	74.9	84.8	37.2
MGA_3022	LOCUS_30200	sequence1:3176178..3179330(-)	partial			WP_002370929.1	type 2 lanthipeptide synthetase LanM family protein	30.6	32.2	26.1
MGA_3040	LOCUS_30380	sequence1:3202825..3204123(+)	partial			WP_003906680.1	PPE family protein	47.0	53.3	51.8
MGA_3046	LOCUS_30440	sequence1:3208004..3208579(+)	frameshift		3208537	WP_010950755.1	ACR3 family arsenite efflux transporter	90.6	35.3	68.2
MGA_3047	LOCUS_30450	sequence1:3208590..3208985(+)	frameshift		3208537	WP_003413686.1	ACR3 family arsenite efflux transporter	99.2	26.1	77.7
MGA_3073	LOCUS_30710	sequence1:3233692..3234339(+)	partial			WP_003405732.1	RDD family protein	77.2	69.2	71.7
MGA_3106	LOCUS_31040	sequence1:3265694..3266071(+)	partial			WP_005112946.1	hypothetical protein	46.4	51.0	40.7
MGA_3107	LOCUS_31050	sequence1:3266614..3267078(+)	partial			WP_003898733.1	hypothetical protein	72.7	48.3	76.8
MGA_3124	LOCUS_31220	sequence1:3285985..3287298(-)	partial			WP_013229637.1	TetR/AcrR family transcriptional regulator	62.7	64.0	29.7
MGA_3128	LOCUS_31260	sequence1:3290796..3292565(+)	partial			WP_110170977.1	VWA domain-containing protein	48.4	43.5	33.2
MGA_3150	LOCUS_31480	sequence1:3314289..3314810(-)	frameshift		3314810,3314846	WP_009936776.1	DUF1697 domain-containing protein	99.4	82.2	77.1
MGA_3170	LOCUS_31680	sequence1:3332611..3333768(+)	partial			WP_003911027.1	PE family protein	26.5	23.5	59.2
MGA_3171	LOCUS_31690	sequence1:3333992..3335503(+)	partial			WP_003406165.1	PE family protein	39.6	63.6	40.5
MGA_3174	LOCUS_31720	sequence1:3337478..3337831(+)	partial			WP_003406163.1	hypothetical protein	89.7	71.9	70.5
MGA_3175	LOCUS_31730	sequence1:3337828..3338586(-)	partial			WP_003898753.1	PE family protein	44.8	36.4	72.6
MGA_3181	LOCUS_31790	sequence1:3346403..3346804(+)	internal_stop_codon	3346802..3346804(+)		WP_003899248.1	alpha/beta hydrolase	97.0	29.9	62.8
MGA_3206	LOCUS_32040	sequence1:3374834..3376279(-)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	59.5	30.3	41.2
MGA_3211	LOCUS_32090	sequence1:3380108..3380524(-)	frameshift,internal_stop_codon	3380524..3380526(-)	3380505	WP_003419293.1	3-oxo-23,24-bisnorchol-4,17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2	94.9	40.5	42.7
MGA_3212	LOCUS_32100	sequence1:3380524..3381075(-)	frameshift		3380529	WP_013224382.1	OB-fold domain-containing protein	86.9	50.3	45.1
MGA_3218	LOCUS_32160	sequence1:3389699..3390193(+)	partial			WP_010908096.1	acyl-CoA synthetase	42.1	14.5	82.6
MGA_3227	LOCUS_32250	sequence1:3400702..3401067(+)	partial			WP_010908107.1	DivIVA domain-containing protein	66.9	71.1	86.4
MGA_3246	LOCUS_32440	sequence1:3419337..3419846(-)	partial			WP_003406288.1	DUF4190 domain-containing protein	54.4	46.5	49.5
MGA_3272	LOCUS_32700	sequence1:3451525..3452217(+)	partial			WP_003896435.1	LLM class flavin-dependent oxidoreductase	100.0	67.6	66.9
MGA_3274	LOCUS_32720	sequence1:3453368..3454096(+)	frameshift		3453363	WP_003406369.1	amidase	100.0	52.4	81.5
MGA_3276	LOCUS_32740	sequence1:3455539..3456123(+)	internal_stop_codon	3455518..3455520(+)		WP_003406375.1	transcriptional regulator AbmR	99.0	82.7	87.0
MGA_3400	LOCUS_33980	sequence1:3592532..3593515(+)	frameshift		3593384,3592487	WP_011921673.1	IS110 family transposase	85.6	72.6	41.3
MGA_3417	LOCUS_34150	sequence1:3606799..3606978(-)	partial			WP_011729610.1	Zn-dependent alcohol dehydrogenase	86.4	13.5	41.2
MGA_3418	LOCUS_34160	sequence1:3607086..3607937(-)	partial			WP_003405603.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	60.1	67.7	80.6
MGA_3419	LOCUS_34170	sequence1:3607934..3608491(-)	partial			WP_026312796.1	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	77.8	69.9	35.6
MGA_3425	LOCUS_34230	sequence1:3613734..3614405(+)	frameshift		3614352,3613731	WP_011727513.1	IS1634-like element ISMsm6 family transposase	91.9	37.6	83.4
MGA_3426	LOCUS_34240	sequence1:3614402..3614839(+)	frameshift		3614351	WP_011727513.1	IS1634-like element ISMsm6 family transposase	100.0	26.6	83.4
MGA_3435	LOCUS_34330	sequence1:3622046..3622831(-)	partial			WP_003407157.1	membrane protein	59.4	59.0	67.1
MGA_3441	LOCUS_34390	sequence1:3629822..3630688(-)	frameshift		3629872,3630707,3629885,3630719	WP_003906341.1	HNH endonuclease signature motif containing protein	96.5	55.5	59.2
MGA_3442	LOCUS_34400	sequence1:3631388..3632278(-)	frameshift		3632160	WP_011071113.1	IS1595-like element ISSod11 family transposase	76.4	70.4	44.5
MGA_3465	LOCUS_34630	sequence1:3656528..3657691(-)	partial			WP_013229312.1	aromatic ring-hydroxylating dioxygenase subunit alpha	51.7	56.3	37.7
MGA_3475	LOCUS_34730	sequence1:3675963..3676220(+)	partial			WP_003896152.1	DUF3618 domain-containing protein	68.2	77.3	70.7
MGA_3484	LOCUS_34820	sequence1:3683859..3684491(-)	partial			WP_011727450.1	hypothetical protein	69.5	64.0	69.2
MGA_3516	LOCUS_35140	sequence1:3720946..3721425(+)	partial			WP_012296243.1	MobF family relaxase	86.8	12.4	64.5
MGA_3517	LOCUS_35150	sequence1:3721413..3721616(+)	partial			WP_005110336.1	site-specific integrase	94.0	16.2	76.2
MGA_3562	LOCUS_35600	sequence1:3776201..3777064(+)	internal_stop_codon	3777062..3777064(+)		WP_003895997.1	cytochrome P450	95.1	65.2	79.1
MGA_3563	LOCUS_35610	sequence1:3777143..3777478(+)	internal_stop_codon	3777062..3777064(+)		WP_003895997.1	cytochrome P450	100.0	26.5	74.8
MGA_3595	LOCUS_35930	sequence1:3826297..3826749(-)	partial			WP_003807341.1	MarR family transcriptional regulator	84.0	71.2	31.0
MGA_3611	LOCUS_36090	sequence1:3844064..3844480(-)	frameshift		3844494	WP_003405897.1	HNH endonuclease signature motif containing protein	100.0	30.2	74.6
MGA_3612	LOCUS_36100	sequence1:3844477..3845433(-)	frameshift		3844494	WP_003405897.1	HNH endonuclease signature motif containing protein	97.8	69.0	60.8
MGA_3621	LOCUS_36190	sequence1:3856433..3859984(+)	frameshift		3859951	WP_003899299.1	phenyloxazoline synthase MbtB	98.5	82.2	69.2
MGA_3630	LOCUS_36280	sequence1:3878184..3878738(+)	partial			WP_012296517.1	hypothetical protein	65.8	68.0	44.6
MGA_3632	LOCUS_36300	sequence1:3879640..3880236(-)	partial			WP_011974366.1	carboxymuconolactone decarboxylase family protein	56.1	71.9	25.0
MGA_3638	LOCUS_36360	sequence1:3883940..3884497(+)	partial			WP_003113399.1	dienelactone hydrolase family protein	91.9	40.2	56.5
MGA_3650	LOCUS_36480	sequence1:3894464..3894877(-)	partial			WP_003412205.1	metalloregulator ArsR/SmtB family transcription factor	74.5	75.6	90.2
MGA_3681	LOCUS_36790	sequence1:3924109..3924720(+)	partial			WP_011730383.1	hypothetical protein	70.4	73.4	50.7
MGA_3683	LOCUS_36810	sequence1:3925316..3925819(+)	partial			WP_003899112.1	CAP domain-containing protein	86.8	66.5	67.3
MGA_3689	LOCUS_36870	sequence1:3935353..3935919(+)	partial			WP_011706423.1	isoprenylcysteine carboxylmethyltransferase family protein	42.0	53.0	38.8
MGA_3691	LOCUS_36890	sequence1:3936722..3937465(+)	partial			WP_235632064.1	esterase-like activity of phytase family protein	98.8	65.7	55.8
MGA_3692	LOCUS_36900	sequence1:3937424..3939733(-)	partial			WP_005091701.1	ATP-binding cassette domain-containing protein	69.2	61.3	44.6
MGA_3707	LOCUS_37050	sequence1:3955899..3956165(-)	partial			WP_005110336.1	site-specific integrase	90.9	20.6	76.2
MGA_3708	LOCUS_37060	sequence1:3956050..3956721(+)	partial			WP_221109609.1	hypothetical protein	57.0	10.2	33.6
MGA_3715	LOCUS_37130	sequence1:3963054..3964625(-)	partial			WP_011031195.1	zinc-ribbon domain-containing protein	30.4	26.6	62.3
MGA_3720	LOCUS_37180	sequence1:3968689..3969600(+)	partial			WP_003899282.1	TPM domain-containing protein	65.7	30.9	47.5
MGA_3736	LOCUS_37340	sequence1:3987426..3987983(-)	partial			WP_011730617.1	hypothetical protein	69.7	71.1	41.2
MGA_3741	LOCUS_37390	sequence1:3991863..3992855(+)	partial			WP_012804200.1	putative FMN-dependent luciferase-like monooxygenase	41.2	37.1	42.0
MGA_3756	LOCUS_37540	sequence1:4005968..4006456(+)	partial			WP_011731409.1	VOC family protein	53.1	60.0	39.8
MGA_3763	LOCUS_37610	sequence1:4009874..4010317(-)	partial			WP_003411668.1	hypothetical protein	83.7	70.3	76.4
MGA_3769	LOCUS_37670	sequence1:4015746..4016099(-)	partial			WP_223495338.1	hypothetical protein	49.6	84.3	52.5
MGA_3781	LOCUS_37790	sequence1:4026648..4027175(+)	partial			WP_011730495.1	nitroreductase family deazaflavin-dependent oxidoreductase	44.0	59.5	43.6
MGA_3799	LOCUS_37970	sequence1:4045183..4045539(-)	partial			WP_003412289.1	sodium-dependent bicarbonate transport family permease	98.3	27.8	81.0
MGA_3857	LOCUS_38550	sequence1:4107181..4108095(+)	partial			WP_003411405.1	MmpS family transport accessory protein	31.6	32.8	92.9
MGA_3876	LOCUS_38740	sequence1:4127058..4128350(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	31.4	22.3	32.9
MGA_3878	LOCUS_38760	sequence1:4129819..4130880(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	66.9	42.0	36.1
MGA_3884	LOCUS_38820	sequence1:4136787..4137833(+)	partial			WP_010950950.1	type VII secretion system ESX-1 AAA family ATPase EccA1	91.1	57.2	29.9
MGA_3886	LOCUS_38840	sequence1:4139739..4139987(-)	frameshift		4140048	WP_003894879.1	ParD-like family protein	90.2	56.9	60.8
MGA_3887	LOCUS_38850	sequence1:4140330..4141244(-)	partial			WP_010941160.1	tyrosine recombinase XerC	74.0	74.8	28.3
MGA_3888	LOCUS_38860	sequence1:4141476..4142822(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	31.9	23.3	28.9
MGA_3891	LOCUS_38890	sequence1:4145598..4146578(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	96.9	54.4	33.4
MGA_3892	LOCUS_38900	sequence1:4147218..4148132(-)	partial			WP_010941160.1	tyrosine recombinase XerC	74.0	74.8	28.4
MGA_3894	LOCUS_38920	sequence1:4149803..4151044(+)	partial			WP_010886125.1	PE domain-containing protein	42.9	20.1	26.9
MGA_3895	LOCUS_38930	sequence1:4151061..4152254(+)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	79.8	57.0	31.3
MGA_3930	LOCUS_39280	sequence1:4187680..4188369(-)	partial			WP_003411129.1	phosphoribosyltransferase family protein	99.6	63.6	75.0
MGA_3935	LOCUS_39330	sequence1:4194151..4194576(+)	frameshift		4194516,4194583	WP_005111113.1	PAS and ANTAR domain-containing protein	73.0	53.1	64.1
MGA_3937	LOCUS_39350	sequence1:4195385..4196641(-)	frameshift		4196890,4196757	WP_178372834.1	IS256 family transposase	45.5	46.1	31.1
MGA_3948	LOCUS_39460	sequence1:4206678..4206986(-)	partial			WP_005112752.1	DUF6262 family protein	59.8	47.0	53.2
MGA_3963	LOCUS_39610	sequence1:4220798..4221100(+)	partial			WP_003411107.1	hypothetical protein	99.0	73.7	84.2
MGA_3983	LOCUS_39810	sequence1:4241000..4241833(-)	frameshift		4241844	WP_003411031.1	integral membrane protein	89.9	62.7	65.5
MGA_3984	LOCUS_39820	sequence1:4241743..4242153(-)	frameshift		4241844	WP_003411031.1	integral membrane protein	76.5	26.2	45.2
MGA_3996	LOCUS_39940	sequence1:4254827..4255552(+)	partial			WP_003410762.1	DUF4333 domain-containing protein	50.6	50.8	69.4
MGA_3999	LOCUS_39970	sequence1:4257752..4260016(+)	partial			WP_011727967.1	hypothetical protein	54.2	31.8	30.8
MGA_4007	LOCUS_40050	sequence1:4265814..4267370(+)	partial			WP_011727070.1	PPE family protein	41.7	42.8	51.3
MGA_4022	LOCUS_40200	sequence1:4285202..4285996(+)	frameshift		4285193	WP_003902238.1	apolipoprotein N-acyltransferase	95.1	28.7	89.6
MGA_4024	LOCUS_40220	sequence1:4286550..4286852(+)	partial			WP_005080063.1	hypothetical protein	84.0	74.3	58.3
MGA_4033	LOCUS_40310	sequence1:4309462..4309758(+)	frameshift		4309418	WP_003899143.1	ketosteroid isomerase family protein	99.0	36.6	68.0
MGA_4070	LOCUS_40680	sequence1:4340606..4341634(+)	partial			WP_011964234.1	site-specific integrase	48.2	42.7	29.7
MGA_4074	LOCUS_40720	sequence1:4344364..4346460(+)	partial			WP_010903642.1	DEAD/DEAH box helicase	27.9	24.8	31.8
MGA_4102	LOCUS_41000	sequence1:4365491..4366720(-)	partial			WP_011031310.1	methyltransferase, FxLD system	97.1	57.3	39.7
MGA_4107	LOCUS_41050	sequence1:4368658..4368924(-)	partial			WP_005093297.1	hypothetical protein	50.0	51.8	68.2
MGA_4117	LOCUS_41150	sequence1:4379798..4381843(-)	partial			WP_011203728.1	DUF2961 domain-containing protein	68.0	84.9	25.0
MGA_4118	LOCUS_41160	sequence1:4381880..4383499(-)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	53.6	54.1	46.5
MGA_4119	LOCUS_41170	sequence1:4383719..4384489(+)	partial			WP_005056110.1	class I SAM-dependent methyltransferase	63.7	66.1	48.2
MGA_4142	LOCUS_41400	sequence1:4407424..4407720(-)	internal_stop_codon	4407787..4407789(-)		WP_013224403.1	VOC family protein	100.0	72.1	75.5
MGA_4172	LOCUS_41700	sequence1:4438338..4438820(+)	frameshift,internal_stop_codon	4438313..4438315(+),4438322..4438324(+)	4438333	WP_003899074.1	DUF4262 domain-containing protein	96.9	70.2	52.9
MGA_4188	LOCUS_41860	sequence1:4453249..4454184(-)	frameshift		4453392,4453395,4453397,4453398	WP_010886090.1	PE family protein	39.2	13.8	55.7
MGA_4203	LOCUS_42010	sequence1:4466612..4468453(+)	partial			WP_076162271.1	hypothetical protein	42.3	50.9	29.9
MGA_4205	LOCUS_42030	sequence1:4469964..4471361(+)	partial			WP_010940001.1	phenylacetate--CoA ligase	32.0	35.2	32.7
MGA_4211	LOCUS_42090	sequence1:4477198..4477506(+)	partial			WP_003895017.1	(2Fe-2S)-binding protein	50.0	73.9	64.7
MGA_4228	LOCUS_42260	sequence1:4494141..4495145(-)	partial			WP_003900424.1	CoA transferase	93.4	39.3	76.9
MGA_4236	LOCUS_42340	sequence1:4503432..4504502(-)	partial			WP_003409337.1	adhesin Apa	67.7	69.8	67.5
MGA_4250	LOCUS_42480	sequence1:4517079..4518275(-)	partial			WP_003409179.1	PPE family protein	68.3	67.2	38.8
MGA_4255	LOCUS_42530	sequence1:4522127..4522603(-)	partial			WP_003903650.1	PaaI family thioesterase	65.2	72.1	58.3
MGA_4269	LOCUS_42670	sequence1:4538063..4538848(-)	partial			WP_003416051.1	HNH endonuclease signature motif containing protein	100.0	61.6	74.7
MGA_4309	LOCUS_43070	sequence1:4581520..4582191(-)	frameshift		4581540	WP_010907864.1	FAD-dependent oxidoreductase	61.9	30.3	68.8
MGA_4314	LOCUS_43120	sequence1:4587115..4588476(+)	frameshift		4588425	WP_003411973.1	nitrate/nitrite transporter	96.2	84.7	65.8
MGA_4325	LOCUS_43230	sequence1:4603789..4605534(+)	partial			WP_011015416.1	cytochrome b/b6 domain-containing protein	53.9	48.2	40.5
MGA_4340	LOCUS_43380	sequence1:4619846..4620823(+)	frameshift,internal_stop_codon	4619820..4619822(+)	4619831	WP_013228884.1	alpha-ketoacid dehydrogenase subunit alpha/beta	95.1	47.0	51.0
MGA_4344	LOCUS_43420	sequence1:4623512..4624873(+)	partial			WP_011726824.1	aromatic ring-hydroxylating dioxygenase subunit alpha	43.9	49.2	34.9
MGA_4353	LOCUS_43510	sequence1:4631763..4634267(+)	partial			WP_003857914.1	FtsX-like permease family protein	72.3	71.4	23.1
MGA_4354	LOCUS_43520	sequence1:4634294..4635160(-)	partial			WP_003906993.1	PPE family protein	65.3	32.5	56.8
MGA_4355	LOCUS_43530	sequence1:4635280..4635879(-)	partial			WP_011730362.1	class I SAM-dependent methyltransferase	79.9	73.6	39.4
MGA_4369	LOCUS_43670	sequence1:4648425..4648877(-)	internal_stop_codon	4648878..4648880(-)		WP_003408560.1	FAD-dependent oxidoreductase	99.3	32.4	76.5
MGA_4370	LOCUS_43680	sequence1:4648878..4649645(-)	internal_stop_codon	4648878..4648880(-)		WP_003408560.1	FAD-dependent oxidoreductase	99.6	55.2	82.3
MGA_4388	LOCUS_43860	sequence1:4668809..4669249(-)	frameshift,internal_stop_codon	4669245..4669247(-),4669188..4669190(-)	4669181,4669470,4669503	WP_010918993.1	MaoC family dehydratase N-terminal domain-containing protein	65.1	32.5	45.4
MGA_4395	LOCUS_43930	sequence1:4674117..4676078(-)	frameshift		4676291,4676255	WP_003408545.1	ATP transporter ATP-binding protein/permease	99.7	75.3	85.3
MGA_4411	LOCUS_44090	sequence1:4692876..4693346(+)	frameshift		4692765	WP_003899378.1	ATP-binding cassette domain-containing protein	95.5	45.2	75.8
MGA_4420	LOCUS_44180	sequence1:4702555..4702806(-)	partial			WP_003417757.1	type II toxin-antitoxin system antitoxin RelJ	80.7	73.6	64.2
MGA_4431	LOCUS_44290	sequence1:4712108..4712551(+)	partial			WP_011728985.1	DUF5994 family protein	85.0	74.9	57.6
MGA_4432	LOCUS_44300	sequence1:4712611..4713006(+)	frameshift		4712533	WP_011728985.1	DUF5994 family protein	93.9	73.7	58.5
MGA_4433	LOCUS_44310	sequence1:4713301..4714344(+)	frameshift		4714281	WP_003416919.1	NADPH-dependent stearoyl-CoA 9-desaturase	98.3	79.9	71.3
MGA_4434	LOCUS_44320	sequence1:4714304..4714549(+)	frameshift		4714281	WP_003416919.1	NADPH-dependent stearoyl-CoA 9-desaturase	93.8	17.8	64.5
MGA_4438	LOCUS_44360	sequence1:4716358..4717020(-)	partial			WP_012583316.1	prolipoprotein diacylglyceryl transferase	63.6	52.2	27.2
MGA_4441	LOCUS_44390	sequence1:4718628..4720319(-)	partial			WP_048066275.1	PKD domain-containing protein	52.4	17.5	46.5
MGA_4443	LOCUS_44410	sequence1:4720973..4721455(-)	partial			WP_010908390.1	type VII secretion AAA-ATPase EccA	62.5	17.2	35.2
MGA_4452	LOCUS_44500	sequence1:4728872..4729858(-)	partial			WP_003891386.1	type VII secretion system ESX-1 AAA family ATPase EccA1	96.3	54.0	33.1
MGA_4464	LOCUS_44620	sequence1:4744494..4744781(-)	partial			WP_011015575.1	HigA family addiction module antitoxin	91.6	71.9	55.2
MGA_4465	LOCUS_44630	sequence1:4744868..4745275(-)	partial			WP_005110276.1	XRE family transcriptional regulator	51.9	84.3	65.7
MGA_4466	LOCUS_44640	sequence1:4745268..4745480(-)	partial			WP_001227701.1	type II toxin-antitoxin system RelE/ParE family toxin	92.9	58.0	64.6
MGA_4513	LOCUS_45110	sequence1:4808429..4812781(-)	partial			WP_003400998.1	PE-PPE domain-containing protein	6.3	15.5	53.8
MGA_4514	LOCUS_45120	sequence1:4813132..4814871(-)	partial			WP_003420809.1	PE family protein	64.9	78.2	41.4
MGA_4543	LOCUS_45410	sequence1:4853458..4853832(+)	partial			WP_014877829.1	hypothetical protein	71.8	47.2	38.5
MGA_4565	LOCUS_45630	sequence1:4880515..4881183(-)	internal_stop_codon	4880515..4880517(-)		WP_197492547.1	TIGR02234 family membrane protein	96.4	78.8	54.2
MGA_4569	LOCUS_45670	sequence1:4884596..4886134(+)	partial			WP_003899000.1	serine/threonine protein kinase PknF	72.7	77.5	53.5
MGA_4592	LOCUS_45900	sequence1:4905545..4906321(+)	internal_stop_codon	4906319..4906321(+)		WP_003407798.1	NlpC/P60 family peptidoglycan-binding protein RipD	61.6	69.6	80.0
MGA_4639	LOCUS_46370	sequence1:4974359..4974829(+)	partial			WP_003407655.1	glycosyltransferase	92.9	45.5	57.9
MGA_4640	LOCUS_46380	sequence1:4974752..4975876(-)	partial			WP_115168614.1	rhamnan synthesis F family protein	74.9	48.6	24.4
MGA_4645	LOCUS_46430	sequence1:4979770..4980258(+)	partial			WP_003408802.1	cytochrome P450	79.0	35.1	52.9
MGA_4647	LOCUS_46450	sequence1:4981885..4982955(+)	partial			WP_003906680.1	PPE family protein	57.0	48.7	42.6
MGA_4655	LOCUS_46530	sequence1:4988822..4989574(-)	partial			WP_003401181.1	hypothetical protein	74.4	84.9	45.2
MGA_4656	LOCUS_46540	sequence1:4990250..4991722(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	38.8	32.9	27.4
MGA_4670	LOCUS_46680	sequence1:5001766..5002281(-)	partial			WP_010950503.1	PPE family protein	98.2	42.6	27.9
MGA_4688	LOCUS_46860	sequence1:5017894..5018370(+)	partial			WP_005090395.1	nitroreductase family deazaflavin-dependent oxidoreductase	69.6	69.0	44.5
MGA_4704	LOCUS_47020	sequence1:5033898..5034143(+)	frameshift		5034074,5034230	WP_003407514.1	TetR/AcrR family transcriptional regulator	72.8	31.6	98.3
MGA_4705	LOCUS_47030	sequence1:5034104..5034361(+)	frameshift		5034074,5034230	WP_003407514.1	TetR/AcrR family transcriptional regulator	67.1	26.7	73.7
MGA_4706	LOCUS_47040	sequence1:5034313..5034459(+)	frameshift		5034074,5034230	WP_003407514.1	TetR/AcrR family transcriptional regulator	100.0	25.7	81.2
MGA_4713	LOCUS_47110	sequence1:5040218..5040679(+)	frameshift		5040652	WP_003414900.1	phthiotriol/phenolphthiotriol dimycocerosates methyltransferase	75.2	42.6	70.4
MGA_4714	LOCUS_47120	sequence1:5040676..5041041(+)	frameshift		5040652	WP_003407670.1	class I SAM-dependent methyltransferase	100.0	34.3	48.4
MGA_4716	LOCUS_47140	sequence1:5041602..5041946(+)	frameshift		5041890,5041893,5041542,5041818,5041995,5041821	WP_003900343.1	acyl-CoA dehydrogenase	63.2	11.8	93.1
MGA_4717	LOCUS_47150	sequence1:5041962..5042975(+)	frameshift		5041889,5041892,5041817,5041994,5041820	WP_003900343.1	acyl-CoA dehydrogenase	96.7	53.0	83.1
MGA_4718	LOCUS_47160	sequence1:5043197..5043664(+)	frameshift		5043482,5043460,5043629	WP_010886130.1	HNH endonuclease signature motif containing protein	92.3	39.5	75.0
