# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:97..3222(+)	frameshift		43	WP_003898748.1	nitrate reductase subunit alpha	99.2	84.4	81.5
MGA_2	LOCUS_00020	sequence1:3257..3607(+)	frameshift		3529,3541	WP_011730341.1	nitrate reductase subunit beta	79.3	16.8	90.2
MGA_3	LOCUS_00030	sequence1:3654..4355(+)	frameshift		3544,4370,3532,4231	WP_003406090.1	nitrate reductase subunit beta	81.5	34.6	80.8
MGA_5	LOCUS_00050	sequence1:5632..7647(-)	frameshift		7076,7757	WP_003405880.1	decarboxylating 6-phosphogluconate dehydrogenase	28.5	55.9	74.9
MGA_25	LOCUS_00250	sequence1:34586..35230(+)	frameshift		34565	WP_003112560.1	IS3 family transposase	98.1	74.3	48.8
MGA_26	LOCUS_00260	sequence1:35302..35664(-)	partial			WP_128933672.1	IS3 family transposase	46.7	19.7	38.5
MGA_37	LOCUS_00370	sequence1:46729..47043(+)	partial			WP_003899111.1	DUF732 domain-containing protein	88.5	73.6	60.9
MGA_42	LOCUS_00420	sequence1:49585..50508(-)	frameshift		50528,49868	WP_085976939.1	IS3 family transposase	69.4	55.0	80.3
MGA_44	LOCUS_00440	sequence1:50861..51130(-)	partial			WP_090422545.1	IS256 family transposase	57.3	16.8	56.5
MGA_48	LOCUS_00480	sequence1:55895..56389(+)	partial			WP_003406163.1	hypothetical protein	69.5	78.1	57.9
MGA_49	LOCUS_00490	sequence1:56327..57043(-)	partial			WP_003898753.1	PE family protein	44.5	34.4	46.2
MGA_72	LOCUS_00720	sequence1:82924..83307(+)	partial			WP_010908107.1	DivIVA domain-containing protein	74.0	82.5	62.8
MGA_77	LOCUS_00760	sequence1:86837..88681(+)	partial			WP_011727115.1	hypothetical protein	56.8	58.2	35.9
MGA_144	LOCUS_01430	sequence1:161873..163861(+)	partial			WP_010908150.1	transcription termination factor Rho	60.1	64.9	94.0
MGA_154	LOCUS_01530	sequence1:170247..170504(+)	partial			WP_003406686.1	F0F1 ATP synthase subunit C	58.8	61.7	94.0
MGA_186	LOCUS_01850	sequence1:206638..207555(-)	frameshift		207569	WP_003901078.1	IS256-like element IS1081 family transposase	99.7	74.5	80.6
MGA_187	LOCUS_01860	sequence1:207564..207872(-)	frameshift		207569	WP_003904572.1	IS256-like element IS1081 family transposase	99.0	24.3	72.3
MGA_203	LOCUS_02020	sequence1:218799..219728(+)	frameshift		218766	WP_087902221.1	IS3-like element IS987 family transposase	95.1	69.0	67.7
MGA_206	LOCUS_02050	sequence1:220818..221678(+)	frameshift		220797	WP_085976939.1	IS3 family transposase	100.0	73.9	84.6
MGA_207	LOCUS_02060	sequence1:221715..221954(-)	frameshift		222090	WP_173362552.1	IS3 family transposase	94.9	19.0	62.7
MGA_208	LOCUS_02070	sequence1:221962..222438(-)	frameshift,internal_stop_codon	222491..222493(-)	222088,222625,222595	WP_145764452.1	IS3 family transposase	73.4	29.0	59.8
MGA_220	LOCUS_02190	sequence1:231577..232158(+)	partial			WP_011729111.1	hypothetical protein	61.7	59.5	72.3
MGA_223	LOCUS_02220	sequence1:233700..235427(-)	partial			WP_011015416.1	cytochrome b/b6 domain-containing protein	54.4	48.2	40.3
MGA_224	LOCUS_02230	sequence1:235495..237378(-)	frameshift,internal_stop_codon	237197..237199(-)	237073,237317,237342	WP_011015416.1	cytochrome b/b6 domain-containing protein	51.7	48.7	37.1
MGA_229	LOCUS_02280	sequence1:247594..248727(+)	partial			WP_003911666.1	PPE family protein	57.0	47.2	44.3
MGA_286	LOCUS_02850	sequence1:316700..316981(+)	partial			WP_003897998.1	ISL3-like element ISMsm4 family transposase	59.1	12.1	87.3
MGA_299	LOCUS_02980	sequence1:337431..337943(+)	partial			WP_003910562.1	HNH endonuclease	100.0	74.8	76.5
MGA_302	LOCUS_03010	sequence1:338740..339519(+)	partial			WP_011728045.1	type VII secretion target	95.0	65.5	48.8
MGA_369	LOCUS_03680	sequence1:410353..410589(+)	frameshift		410303	WP_003412293.1	resuscitation-promoting factor protein RpfD	100.0	48.7	48.7
MGA_386	LOCUS_03850	sequence1:429252..429845(-)	partial			WP_003973221.1	GNAT family N-acetyltransferase	83.2	71.4	46.7
MGA_391	LOCUS_03900	sequence1:444672..445196(+)	partial			WP_003412264.1	Low molecular weight antigen MTB12	66.7	69.0	48.3
MGA_528	LOCUS_05260	sequence1:589712..590626(+)	partial			WP_003411405.1	MmpS family transport accessory protein	31.6	32.1	82.3
MGA_530	LOCUS_05280	sequence1:591243..592235(+)	partial			WP_005112872.1	alpha/beta hydrolase fold domain-containing protein	67.3	65.1	39.3
MGA_537	LOCUS_05350	sequence1:599899..600228(+)	partial			WP_005074915.1	hypothetical protein	51.4	76.7	75.0
MGA_567	LOCUS_05650	sequence1:631435..633048(+)	partial			WP_049746059.1	putative lipid II flippase FtsW	75.8	70.7	71.0
MGA_576	LOCUS_05740	sequence1:641070..641480(+)	partial			WP_011729649.1	hypothetical protein	39.7	35.5	61.7
MGA_577	LOCUS_05750	sequence1:641499..642164(-)	partial			WP_003411129.1	phosphoribosyltransferase family protein	94.1	59.1	55.3
MGA_578	LOCUS_05760	sequence1:642237..643121(-)	partial			WP_002668780.1	DUF4143 domain-containing protein	99.7	69.2	37.8
MGA_598	LOCUS_05960	sequence1:659859..661202(+)	frameshift		661013	WP_005110557.1	DUF1446 domain-containing protein	86.1	67.1	95.1
MGA_599	LOCUS_05970	sequence1:661228..661584(+)	frameshift		661007	WP_005110557.1	DUF1446 domain-containing protein	100.0	20.6	99.2
MGA_605	LOCUS_06030	sequence1:669169..669648(-)	partial			WP_005110568.1	TetR/AcrR family transcriptional regulator	100.0	71.0	93.7
MGA_606	LOCUS_06040	sequence1:669729..670037(+)	frameshift,internal_stop_codon	669677..669679(+)	669712	WP_234794028.1	transposase	100.0	81.6	72.5
MGA_607	LOCUS_06050	sequence1:670034..670894(+)	frameshift		670013	WP_085976939.1	IS3 family transposase	100.0	73.9	86.0
MGA_613	LOCUS_06110	sequence1:677110..677838(+)	partial			WP_005061064.1	NAD(P)/FAD-dependent oxidoreductase	100.0	47.9	94.6
MGA_635	LOCUS_06330	sequence1:701942..702256(+)	partial			WP_003411107.1	hypothetical protein	80.8	62.8	62.8
MGA_653	LOCUS_06510	sequence1:718188..718781(-)	partial			WP_011729401.1	hypothetical protein	73.1	77.5	46.6
MGA_677	LOCUS_06750	sequence1:741239..742885(+)	partial			WP_005113275.1	PPE family protein	28.8	32.0	60.1
MGA_683	LOCUS_06810	sequence1:749260..750288(-)	frameshift		749609,750308,749612	WP_085976939.1	IS3 family transposase	66.1	58.4	84.1
MGA_691	LOCUS_06890	sequence1:759097..761208(+)	partial			WP_109789858.1	apolipoprotein N-acyltransferase	75.0	82.9	65.5
MGA_714	LOCUS_07120	sequence1:780917..782590(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	52.1	54.4	42.2
MGA_737	LOCUS_07350	sequence1:802152..802625(-)	partial			WP_003400664.1	SRPBCC family protein	97.5	69.2	71.0
MGA_740	LOCUS_07380	sequence1:804589..805512(-)	partial			WP_062284982.1	peptidoglycan DD-metalloendopeptidase family protein	41.0	38.4	40.9
MGA_744	LOCUS_07420	sequence1:808598..809023(-)	frameshift		809007	WP_010970357.1	nucleobase:cation symporter-2 family protein	88.7	25.5	59.2
MGA_745	LOCUS_07430	sequence1:808984..809928(-)	frameshift		809007	WP_010970357.1	nucleobase:cation symporter-2 family protein	96.2	61.6	48.3
MGA_751	LOCUS_07490	sequence1:814458..815006(-)	partial			WP_003411668.1	hypothetical protein	68.7	72.0	51.6
MGA_757	LOCUS_07550	sequence1:820522..821058(+)	partial			WP_003900428.1	hypothetical protein	64.6	75.0	55.1
MGA_760	LOCUS_07580	sequence1:823916..824191(-)	partial			WP_003409536.1	MTH1187 family thiamine-binding protein	82.4	73.5	73.3
MGA_764	LOCUS_07620	sequence1:826326..826586(+)	frameshift		826285	WP_003905677.1	macro domain-containing protein	100.0	25.1	69.8
MGA_772	LOCUS_07700	sequence1:831283..832131(-)	partial			WP_003899065.1	hypothetical protein	39.4	29.2	36.0
MGA_775	LOCUS_07730	sequence1:834018..834461(+)	internal_stop_codon	833973..833975(+)		WP_003409420.1	resuscitation-promoting factor RpfC	64.6	54.0	67.4
MGA_779	LOCUS_07770	sequence1:837668..837883(+)	partial			WP_003895017.1	(2Fe-2S)-binding protein	71.8	73.9	58.8
MGA_788	LOCUS_07860	sequence1:846338..847831(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	54.5	40.9	26.2
MGA_789	LOCUS_07870	sequence1:847887..849689(-)	partial			WP_012257623.1	NAD-binding protein	17.0	18.1	38.2
MGA_797	LOCUS_07950	sequence1:859666..860727(-)	partial			WP_003409337.1	adhesin Apa	49.9	55.7	69.6
MGA_858	LOCUS_08560	sequence1:926164..927459(-)	partial			WP_011087566.1	glutaminase A	83.1	59.9	49.1
MGA_896	LOCUS_08940	sequence1:971437..971937(-)	internal_stop_codon	971437..971439(-)		WP_071997922.1	translation initiation factor IF-3	96.4	78.4	90.0
MGA_905	LOCUS_09030	sequence1:981745..982182(+)	partial			WP_014877829.1	hypothetical protein	79.3	61.7	43.7
MGA_962	LOCUS_09600	sequence1:1038755..1039267(+)	partial			WP_003407798.1	NlpC/P60 family peptidoglycan-binding protein RipD	91.8	67.8	64.1
MGA_996	LOCUS_09940	sequence1:1078621..1079118(+)	partial			WP_086672051.1	nitroreductase family deazaflavin-dependent oxidoreductase	52.1	64.6	44.2
MGA_1096	LOCUS_10940	sequence1:1182644..1183477(+)	partial			WP_003412998.1	B-4DMT family transporter	70.0	84.3	55.9
MGA_1110	LOCUS_11080	sequence1:1196745..1197113(-)	partial			WP_029104321.1	TM2 domain-containing protein	73.0	75.2	58.8
MGA_1130	LOCUS_11280	sequence1:1212547..1213617(+)	partial			WP_003413385.1	protein translocase subunit SecD	94.4	68.6	33.2
MGA_1137	LOCUS_11350	sequence1:1222019..1222375(+)	partial			WP_005093297.1	hypothetical protein	39.8	54.2	63.8
MGA_1165	LOCUS_11630	sequence1:1246739..1247350(+)	partial			WP_011031656.1	hypothetical protein	56.7	80.0	43.1
MGA_1175	LOCUS_11730	sequence1:1252695..1253411(+)	partial			WP_000275180.1	AraC family transcriptional regulator	33.2	57.2	34.2
MGA_1200	LOCUS_11980	sequence1:1271027..1272964(+)	partial			WP_010922064.1	DEAD/DEAH box helicase	51.0	60.9	31.8
MGA_1207	LOCUS_12050	sequence1:1276309..1278276(+)	partial			WP_082107836.1	FtsK/SpoIIIE domain-containing protein	55.0	53.8	26.6
MGA_1240	LOCUS_12380	sequence1:1293239..1294627(-)	partial			WP_001310055.1	RNA-guided endonuclease TnpB family protein	47.4	53.7	31.6
MGA_1291	LOCUS_12880	sequence1:1329587..1330855(+)	partial			WP_011021891.1	pentapeptide repeat-containing protein	29.1	20.7	42.1
MGA_1301	LOCUS_12980	sequence1:1337439..1338197(+)	partial			WP_013389567.1	HNH endonuclease family protein	73.8	75.0	49.5
MGA_1309	LOCUS_13060	sequence1:1344062..1344814(-)	partial			WP_010950494.1	hypothetical protein	53.6	59.5	59.4
MGA_1326	LOCUS_13230	sequence1:1352245..1353213(+)	partial			WP_011014435.1	NlpC/P60 family protein	92.9	51.5	24.6
MGA_1331	LOCUS_13280	sequence1:1356903..1358096(+)	partial			WP_003906680.1	PPE family protein	47.6	47.2	31.6
MGA_1335	LOCUS_13320	sequence1:1362463..1363449(+)	partial			WP_003917259.1	hypothetical protein	36.9	37.1	44.6
MGA_1348	LOCUS_13450	sequence1:1368890..1372618(-)	partial			WP_164930412.1	type I-U CRISPR-associated helicase/endonuclease Cas3	38.1	48.0	25.6
MGA_1365	LOCUS_13620	sequence1:1388378..1389355(-)	partial			WP_003399850.1	type VII secretion system ESX-1 AAA family ATPase EccA1	58.5	32.1	21.9
MGA_1385	LOCUS_13820	sequence1:1398236..1399132(-)	partial			WP_011727554.1	ADP-ribosylglycohydrolase family protein	98.3	62.6	45.3
MGA_1388	LOCUS_13850	sequence1:1400939..1401259(-)	partial			WP_011038739.1	DUF4031 domain-containing protein	51.9	62.8	50.9
MGA_1419	LOCUS_14160	sequence1:1413196..1414482(-)	partial			WP_130110743.1	helix-turn-helix transcriptional regulator	14.5	49.2	54.8
MGA_1431	LOCUS_14280	sequence1:1421170..1423194(-)	partial			WP_015775718.1	hypothetical protein	49.6	77.5	31.0
MGA_1450	LOCUS_14470	sequence1:1440847..1442190(+)	partial			WP_003909105.1	type VII secretion system ESX-1 associated protein EspI	63.3	41.7	28.0
MGA_1472	LOCUS_14680	sequence1:1459317..1460177(+)	frameshift		1459296	WP_085976939.1	IS3 family transposase	100.0	73.9	84.6
MGA_1483	LOCUS_14790	sequence1:1471018..1471674(-)	partial			WP_073792743.1	TnsA-like heteromeric transposase endonuclease subunit	89.4	70.4	39.7
MGA_1484	LOCUS_14800	sequence1:1471845..1472309(-)	partial			WP_005112930.1	class I SAM-dependent methyltransferase	93.5	64.0	49.3
MGA_1488	LOCUS_14840	sequence1:1474859..1475062(-)	partial			WP_003899418.1	helix-turn-helix domain-containing protein	86.6	67.4	58.6
MGA_1490	LOCUS_14860	sequence1:1476732..1477499(-)	partial			WP_003854724.1	HNH endonuclease family protein	71.4	70.9	53.3
MGA_1491	LOCUS_14870	sequence1:1477796..1479100(+)	partial			WP_003901256.1	PPE family protein	71.9	46.0	42.2
MGA_1531	LOCUS_15270	sequence1:1514245..1514589(-)	partial			WP_005062106.1	transglycosylase family protein	77.2	58.7	73.9
MGA_1564	LOCUS_15600	sequence1:1546011..1546340(-)	partial			WP_011726633.1	WhiB family transcriptional regulator	67.9	76.3	68.9
MGA_1567	LOCUS_15630	sequence1:1549259..1549753(-)	partial			WP_003410762.1	DUF4333 domain-containing protein	72.0	48.8	44.5
MGA_1577	LOCUS_15730	sequence1:1560351..1560959(+)	partial			WP_193487124.1	TetR family transcriptional regulator	70.3	59.2	37.3
MGA_1591	LOCUS_15870	sequence1:1572558..1573478(+)	partial			WP_011228982.1	DUF1028 domain-containing protein	63.7	67.6	45.6
MGA_1599	LOCUS_15950	sequence1:1581068..1581487(-)	partial			WP_010979840.1	CBS domain-containing protein	71.2	76.0	35.4
MGA_1656	LOCUS_16520	sequence1:1654603..1658247(-)	frameshift		1658304,1658505,1658490	WP_010908855.1	type I polyketide synthase	69.7	56.2	44.5
MGA_1657	LOCUS_16530	sequence1:1658503..1660365(-)	frameshift		1658490,1658508,1658310	WP_010886158.1	phthiocerol type I polyketide synthase PpsA	98.5	31.8	63.3
MGA_1658	LOCUS_16540	sequence1:1660362..1662881(-)	frameshift		1662988	WP_010950800.1	phthiocerol type I polyketide synthase PpsA	99.6	46.9	44.3
MGA_1659	LOCUS_16550	sequence1:1662845..1665307(-)	frameshift		1665368,1662995,1665374	WP_010950800.1	phthiocerol type I polyketide synthase PpsA	93.3	40.4	61.4
MGA_1682	LOCUS_16780	sequence1:1688424..1688975(+)	partial			WP_003414678.1	M23 family metallopeptidase	77.6	57.8	72.2
MGA_1692	LOCUS_16880	sequence1:1698652..1699221(+)	partial			WP_010908253.1	histidine phosphatase family protein	46.0	35.2	39.8
MGA_1697	LOCUS_16930	sequence1:1702426..1703103(-)	internal_stop_codon	1702426..1702428(-),1702405..1702407(-)		WP_003414713.1	ribonuclease HII	96.9	84.5	74.0
MGA_1704	LOCUS_17000	sequence1:1707072..1707653(-)	partial			WP_005111678.1	30S ribosomal protein S16	59.6	74.2	93.9
MGA_1721	LOCUS_17170	sequence1:1723360..1724220(+)	frameshift		1723339	WP_085976939.1	IS3 family transposase	100.0	73.9	84.6
MGA_1744	LOCUS_17400	sequence1:1744643..1744858(-)	frameshift		1744856	WP_013230879.1	GNAT family N-acetyltransferase	73.2	34.9	65.4
MGA_1752	LOCUS_17480	sequence1:1752930..1753613(-)	frameshift,internal_stop_codon	1752914..1752916(-),1752929..1752931(-)	1753195	WP_003415107.1	DNA-binding protein HupB	46.7	49.5	87.7
MGA_1776	LOCUS_17720	sequence1:1777569..1778042(-)	partial			WP_003900026.1	hypoxia response transcriptional regulator	63.1	67.1	40.4
MGA_1777	LOCUS_17730	sequence1:1778063..1779013(+)	frameshift		1779122,1778887	WP_012296234.1	mercury(II) reductase	87.0	58.3	52.9
MGA_1778	LOCUS_17740	sequence1:1778901..1779164(+)	frameshift		1779122,1778887	WP_012296234.1	mercury(II) reductase	85.1	15.7	64.9
MGA_1779	LOCUS_17750	sequence1:1779161..1779484(+)	frameshift		1779122	WP_012296234.1	mercury(II) reductase	100.0	23.1	55.0
MGA_1783	LOCUS_17790	sequence1:1781028..1781906(+)	partial			WP_005112261.1	cytochrome c biogenesis CcdA family protein	74.3	76.3	30.9
MGA_1785	LOCUS_17810	sequence1:1782759..1783508(-)	frameshift		1783522	WP_189327688.1	IS21 family transposase	92.4	38.9	41.3
MGA_1786	LOCUS_17820	sequence1:1783508..1784323(-)	frameshift		1784307,1783524	WP_189327688.1	IS21 family transposase	96.3	47.2	56.9
MGA_1813	LOCUS_18090	sequence1:1811584..1812903(-)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	71.3	49.7	37.8
MGA_1835	LOCUS_18310	sequence1:1834705..1835115(-)	partial			WP_003408743.1	carboxymuconolactone decarboxylase family protein	74.3	84.9	69.3
MGA_1842	LOCUS_18380	sequence1:1843260..1845458(-)	partial			WP_003911223.1	hypothetical protein	19.4	27.4	36.0
MGA_1849	LOCUS_18450	sequence1:1854587..1857214(-)	partial			WP_003903975.1	phage/plasmid primase, P4 family	47.7	79.8	31.2
MGA_1857	LOCUS_18530	sequence1:1863364..1863873(+)	partial			WP_015776876.1	hypothetical protein	74.6	77.8	32.3
MGA_1865	LOCUS_18610	sequence1:1870118..1870585(-)	partial			WP_003416124.1	hypothetical protein	47.7	51.0	58.7
MGA_1872	LOCUS_18680	sequence1:1879063..1879398(+)	partial			WP_010941967.1	arsenosugar biosynthesis-associated peroxidase-like protein	69.4	70.0	46.8
MGA_1884	LOCUS_18790	sequence1:1889839..1890330(+)	frameshift		1889651	WP_003404760.1	IS607-like element IS1535 family transposase	68.7	58.0	90.2
MGA_1891	LOCUS_18860	sequence1:1900171..1900821(+)	partial			WP_011026934.1	nitrate reductase molybdenum cofactor assembly chaperone	87.5	73.4	43.9
MGA_1897	LOCUS_18920	sequence1:1904346..1905866(+)	partial			WP_010950653.1	alpha/beta hydrolase	36.6	30.0	34.7
MGA_1943	LOCUS_19380	sequence1:1953328..1953993(+)	partial			WP_011727450.1	hypothetical protein	64.7	62.7	50.3
MGA_1956	LOCUS_19510	sequence1:1967259..1967528(-)	partial			WP_003893333.1	transcriptional regulator WhiB7	74.2	69.9	62.5
MGA_1970	LOCUS_19650	sequence1:1984692..1985582(+)	partial			WP_011728023.1	MmpS family transport accessory protein	59.5	65.0	40.4
MGA_1999	LOCUS_19940	sequence1:2011446..2011934(+)	partial			WP_003416932.1	Rv3235 family protein	69.1	53.5	48.3
MGA_2043	LOCUS_20380	sequence1:2059678..2061450(+)	partial			WP_012256222.1	ABC transporter ATP-binding protein	42.7	70.7	48.2
MGA_2045	LOCUS_20400	sequence1:2062088..2062315(-)	partial			WP_029104552.1	hypothetical protein	69.3	70.3	48.1
MGA_2049	LOCUS_20440	sequence1:2065615..2065773(-)	partial			WP_003893212.1	acyl-CoA dehydrogenase	100.0	13.4	96.2
MGA_2051	LOCUS_20460	sequence1:2066828..2067757(-)	frameshift		2067789	WP_087902221.1	IS3-like element IS987 family transposase	95.1	69.0	67.3
MGA_2053	LOCUS_20480	sequence1:2069381..2069572(-)	partial			WP_087902221.1	IS3-like element IS987 family transposase	87.3	13.1	50.9
MGA_2070	LOCUS_20650	sequence1:2084208..2084519(-)	partial			WP_003893151.1	protein UsfY	64.1	69.7	40.6
MGA_2074	LOCUS_20690	sequence1:2087478..2087666(-)	partial			WP_011727890.1	CDGSH iron-sulfur domain-containing protein	82.3	73.2	65.4
MGA_2077	LOCUS_20720	sequence1:2090547..2090819(+)	partial			WP_013225972.1	hypothetical protein	68.9	40.5	54.8
MGA_2081	LOCUS_20760	sequence1:2092254..2092700(+)	partial			WP_011727905.1	STAS domain-containing protein	65.5	69.0	39.8
MGA_2086	LOCUS_20810	sequence1:2094614..2094859(+)	partial			WP_005058264.1	CsbD family protein	70.4	73.1	54.4
MGA_2087	LOCUS_20820	sequence1:2095128..2095526(-)	partial			WP_003417165.1	hypothetical protein	65.2	67.2	44.2
MGA_2107	LOCUS_21020	sequence1:2118866..2120410(-)	partial			WP_003900817.1	PE-PPE domain-containing protein	60.9	57.6	37.4
MGA_2108	LOCUS_21030	sequence1:2120495..2122042(-)	partial			WP_010950605.1	PPE family protein	65.0	44.0	32.1
MGA_2109	LOCUS_21040	sequence1:2122151..2123539(-)	partial			WP_003400998.1	PE-PPE domain-containing protein	61.7	46.1	35.4
MGA_2119	LOCUS_21140	sequence1:2132600..2133205(+)	partial			WP_003905037.1	IS110 family transposase	99.5	34.7	74.0
MGA_2129	LOCUS_21240	sequence1:2142293..2144047(-)	partial			WP_011727070.1	PPE family protein	42.8	47.6	48.0
MGA_2145	LOCUS_21400	sequence1:2160256..2160801(-)	partial			WP_005110063.1	hypothetical protein	54.7	40.7	63.8
MGA_2154	LOCUS_21490	sequence1:2172757..2173158(+)	partial			WP_011203343.1	serine hydrolase	67.7	16.8	44.4
MGA_2164	LOCUS_21590	sequence1:2184229..2185275(-)	partial			WP_003418011.1	anti-sigma D factor RsdA	69.0	77.9	43.3
MGA_2188	LOCUS_21830	sequence1:2211202..2211435(-)	internal_stop_codon	2211202..2211204(-)		WP_205421581.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	96.1	11.5	43.2
MGA_2191	LOCUS_21860	sequence1:2212837..2213607(-)	partial			WP_011729363.1	OB-fold domain-containing protein	39.8	70.5	40.2
MGA_2199	LOCUS_21940	sequence1:2221617..2222432(-)	partial			WP_003898131.1	SDR family oxidoreductase	68.6	77.1	44.4
MGA_2221	LOCUS_22160	sequence1:2243568..2244125(-)	partial			WP_003418346.1	50S ribosomal protein L17	65.4	67.2	90.9
MGA_2235	LOCUS_22300	sequence1:2256237..2256827(-)	partial			WP_011727700.1	haloacid dehalogenase	90.8	60.9	44.4
MGA_2265	LOCUS_22600	sequence1:2280378..2280680(-)	partial			WP_003898560.1	30S ribosomal protein S17	94.0	69.6	84.0
MGA_2311	LOCUS_23060	sequence1:2331445..2331840(+)	partial			WP_011727496.1	cyclopropane mycolic acid synthase family methyltransferase	100.0	42.7	55.0
MGA_2327	LOCUS_23220	sequence1:2342297..2343961(+)	partial			WP_010950374.1	PPE family protein	56.7	54.3	41.8
MGA_2328	LOCUS_23230	sequence1:2343958..2344734(-)	partial			WP_012258317.1	class I SAM-dependent methyltransferase	72.1	73.4	52.9
MGA_2336	LOCUS_23310	sequence1:2355675..2356304(+)	partial			WP_011729718.1	NAD(P)/FAD-dependent oxidoreductase	97.6	40.0	56.0
MGA_2337	LOCUS_23320	sequence1:2356402..2358006(+)	partial			WP_010950585.1	serine/threonine protein kinase PknE	51.1	48.2	54.0
MGA_2342	LOCUS_23370	sequence1:2369221..2374605(+)	partial			WP_010895613.1	non-ribosomal peptide synthetase	58.6	20.1	43.5
MGA_2345	LOCUS_23400	sequence1:2377063..2379591(-)	partial			WP_011389453.1	lipoprotein-releasing ABC transporter permease subunit	35.2	79.6	21.6
MGA_2364	LOCUS_23590	sequence1:2397104..2397337(-)	partial			WP_011727568.1	ATP-binding domain-containing protein	66.2	9.3	54.9
MGA_2365	LOCUS_23600	sequence1:2397301..2397627(-)	partial			WP_011727558.1	nucleoside triphosphate pyrophosphohydrolase	44.4	49.0	62.5
MGA_2375	LOCUS_23700	sequence1:2406968..2409727(-)	partial			WP_001242210.1	AAA family ATPase	23.6	20.4	28.6
MGA_2376	LOCUS_23710	sequence1:2409727..2410839(-)	partial			WP_010969142.1	exonuclease SbcCD subunit D	72.7	63.0	28.0
MGA_2379	LOCUS_23740	sequence1:2413068..2413334(+)	partial			WP_011227971.1	type II toxin-antitoxin system VapC family toxin	84.1	56.9	43.2
MGA_2420	LOCUS_24150	sequence1:2456642..2457091(+)	frameshift		2456989	WP_011055870.1	carotenoid oxygenase family protein	55.7	17.2	47.6
MGA_2421	LOCUS_24160	sequence1:2457019..2458080(+)	frameshift		2456971	WP_011727738.1	carotenoid oxygenase family protein	97.2	70.9	33.4
MGA_2423	LOCUS_24180	sequence1:2458545..2459219(+)	partial			WP_011729186.1	oxygenase MpaB family protein	90.2	69.4	42.6
MGA_2425	LOCUS_24200	sequence1:2459934..2460524(-)	partial			WP_011727419.1	glycosyltransferase family 1 protein	85.2	49.1	51.1
MGA_2460	LOCUS_24550	sequence1:2491390..2492751(-)	partial			WP_003409061.1	PPE family protein	45.9	46.2	48.6
MGA_2464	LOCUS_24590	sequence1:2495576..2495923(-)	partial			WP_005089627.1	hypothetical protein	69.6	75.5	47.0
MGA_2473	LOCUS_24680	sequence1:2504563..2504775(-)	partial			WP_003402695.1	glutaredoxin family protein	100.0	72.2	60.0
MGA_2488	LOCUS_24830	sequence1:2519312..2519674(+)	partial			WP_005061963.1	SRPBCC family protein	83.3	55.2	67.3
MGA_2501	LOCUS_24960	sequence1:2533691..2534377(+)	frameshift		2534384,2534332	WP_012296722.1	TetR/AcrR family transcriptional regulator	84.6	44.3	41.5
MGA_2502	LOCUS_24970	sequence1:2534374..2534994(+)	partial			WP_005084765.1	TetR/AcrR family transcriptional regulator	71.8	71.6	34.0
MGA_2511	LOCUS_25060	sequence1:2543427..2544248(+)	partial			WP_005094761.1	hypothetical protein	56.0	55.6	45.8
MGA_2530	LOCUS_25250	sequence1:2564385..2565302(+)	internal_stop_codon	2565300..2565302(+)		WP_005079755.1	MlaD family protein	90.8	61.3	49.5
MGA_2531	LOCUS_25260	sequence1:2565345..2565656(+)	internal_stop_codon	2565300..2565302(+)		WP_005110213.1	MlaD family protein	99.0	25.3	58.8
MGA_2532	LOCUS_25270	sequence1:2565679..2566344(+)	partial			WP_011727450.1	hypothetical protein	64.3	62.3	46.5
MGA_2548	LOCUS_25430	sequence1:2581111..2582067(+)	partial			WP_041323409.1	DUF2993 domain-containing protein	76.7	72.9	50.2
MGA_2565	LOCUS_25600	sequence1:2596871..2598379(-)	partial			WP_003401347.1	PPE family protein	40.0	36.2	42.8
MGA_2569	LOCUS_25640	sequence1:2602403..2603062(-)	partial			WP_003402299.1	hypothetical protein	65.8	79.3	50.7
MGA_2581	LOCUS_25760	sequence1:2614799..2615173(+)	partial			WP_013224908.1	hypothetical protein	71.8	74.8	60.7
MGA_2621	LOCUS_26160	sequence1:2656800..2657279(+)	partial			WP_003899794.1	hypothetical protein	42.8	53.6	50.0
MGA_2629	LOCUS_26240	sequence1:2663811..2665475(+)	partial			WP_011726651.1	hypothetical protein	40.6	83.5	26.0
MGA_2634	LOCUS_26290	sequence1:2671037..2671456(+)	partial			WP_003410762.1	DUF4333 domain-containing protein	84.2	48.0	49.6
MGA_2650	LOCUS_26450	sequence1:2683011..2683703(+)	internal_stop_codon	2682963..2682965(+)		WP_011727189.1	hypothetical protein	97.4	78.2	43.8
MGA_2658	LOCUS_26530	sequence1:2687805..2688272(+)	frameshift		2687601,2688171	WP_003901078.1	IS256-like element IS1081 family transposase	78.7	29.4	84.4
MGA_2659	LOCUS_26540	sequence1:2688164..2688721(+)	frameshift		2688170	WP_003901078.1	IS256-like element IS1081 family transposase	98.4	45.1	78.1
MGA_2664	LOCUS_26590	sequence1:2693564..2694121(-)	frameshift		2694114	WP_003901078.1	IS256-like element IS1081 family transposase	98.4	45.1	78.1
MGA_2665	LOCUS_26600	sequence1:2694013..2694480(-)	frameshift		2694113,2694587	WP_003901078.1	IS256-like element IS1081 family transposase	78.7	29.4	84.4
MGA_2666	LOCUS_26610	sequence1:2694567..2694797(-)	frameshift		2694587	WP_003904572.1	IS256-like element IS1081 family transposase	96.1	17.6	65.8
MGA_2670	LOCUS_26650	sequence1:2697562..2697735(+)	partial			WP_003899614.1	ATP-binding protein	82.5	19.0	57.4
MGA_2671	LOCUS_26660	sequence1:2697902..2698714(+)	partial			WP_011727797.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(38)	94.1	66.8	54.2
MGA_2675	LOCUS_26700	sequence1:2700525..2701124(+)	partial			WP_003113746.1	TetR/AcrR family transcriptional regulator	27.6	28.1	45.5
MGA_2696	LOCUS_26910	sequence1:2721224..2721667(+)	partial			WP_005110193.1	hypothetical protein	57.8	82.7	46.5
MGA_2735	LOCUS_27300	sequence1:2758570..2759016(+)	partial			WP_003899161.1	hypothetical protein	84.5	65.2	37.6
MGA_2776	LOCUS_27710	sequence1:2795377..2796930(-)	partial			WP_011727115.1	hypothetical protein	57.4	51.1	40.1
MGA_2778	LOCUS_27730	sequence1:2798266..2798421(-)	partial			WP_003895789.1	excalibur calcium-binding domain-containing protein	78.4	63.5	62.5
MGA_2787	LOCUS_27820	sequence1:2806875..2807546(+)	partial			WP_003412695.1	hypothetical protein	63.7	60.5	39.2
MGA_2789	LOCUS_27840	sequence1:2809127..2809732(+)	partial			WP_003400411.1	DUF5631 domain-containing protein	97.0	52.6	41.0
MGA_2810	LOCUS_28050	sequence1:2834114..2835784(-)	partial			WP_010950374.1	PPE family protein	29.0	30.2	58.0
MGA_2866	LOCUS_28610	sequence1:2900245..2901186(+)	partial			WP_005064586.1	DUF4393 domain-containing protein	55.0	61.7	46.0
MGA_2875	LOCUS_28700	sequence1:2911757..2912518(-)	partial			WP_015776328.1	DUF2249 domain-containing protein	32.0	77.1	53.1
MGA_2903	LOCUS_28980	sequence1:2943939..2944700(-)	partial			WP_003908487.1	Ig-like domain-containing protein	97.2	69.9	80.5
MGA_2909	LOCUS_29040	sequence1:2949281..2950216(+)	partial			WP_000857443.1	enoyl-[acyl-carrier-protein] reductase FabK	58.5	54.6	33.0
MGA_2922	LOCUS_29170	sequence1:2960917..2961585(-)	partial			WP_010950707.1	hypothetical protein	64.0	78.9	45.9
MGA_2933	LOCUS_29280	sequence1:2971898..2972587(+)	partial			WP_011727450.1	hypothetical protein	61.1	62.7	54.5
MGA_2936	LOCUS_29310	sequence1:2974134..2974724(-)	partial			WP_011726697.1	hypothetical protein	74.0	77.5	41.4
MGA_2961	LOCUS_29560	sequence1:2999564..3001090(+)	partial			WP_003401003.1	PE-PPE domain-containing protein	73.8	71.0	46.1
MGA_2967	LOCUS_29620	sequence1:3005063..3005611(-)	partial			WP_003400961.1	TetR/AcrR family transcriptional regulator	90.7	58.9	43.6
MGA_2979	LOCUS_29740	sequence1:3013308..3013520(+)	partial			WP_003977449.1	TOBE domain-containing protein	95.7	47.5	53.7
MGA_2993	LOCUS_29880	sequence1:3024989..3025768(+)	frameshift		3025709,3024974	WP_011014460.1	IS1380-like element IS1677 family transposase	95.4	54.4	61.0
MGA_3008	LOCUS_30030	sequence1:3039971..3040930(-)	partial			WP_005079755.1	MlaD family protein	74.6	52.2	25.7
MGA_3019	LOCUS_30140	sequence1:3053027..3054655(-)	partial			WP_003400012.1	type VII secretion system ESX-2 serine protease mycosin MycP2	58.3	57.8	65.4
MGA_3025	LOCUS_30200	sequence1:3058900..3060096(-)	partial			WP_003414680.1	PPE family protein	37.4	36.5	32.0
MGA_3047	LOCUS_30420	sequence1:3079211..3079873(+)	partial			WP_003414864.1	IS21-like element ISMbo1 family transposase	90.5	48.7	47.8
MGA_3048	LOCUS_30430	sequence1:3079970..3080200(+)	frameshift		3080179	WP_003904572.1	IS256-like element IS1081 family transposase	96.1	17.6	65.8
MGA_3049	LOCUS_30440	sequence1:3080287..3081204(+)	frameshift		3080179	WP_003901078.1	IS256-like element IS1081 family transposase	99.7	74.5	80.6
MGA_3050	LOCUS_30450	sequence1:3081264..3081863(+)	partial			WP_003414864.1	IS21-like element ISMbo1 family transposase	98.0	46.5	43.4
MGA_3051	LOCUS_30460	sequence1:3081863..3082174(+)	internal_stop_codon	3082172..3082174(+)		WP_000544830.1	IS21-like element IS21 family helper ATPase IstB	75.7	29.4	34.6
MGA_3059	LOCUS_30540	sequence1:3087146..3088084(-)	partial			WP_005079755.1	MlaD family protein	94.6	64.6	25.2
MGA_3060	LOCUS_30550	sequence1:3088099..3089058(-)	partial			WP_005071126.1	MlaD family protein	59.2	55.2	29.7
MGA_3062	LOCUS_30570	sequence1:3090170..3091138(-)	partial			WP_011730878.1	MCE family protein	59.3	58.2	27.8
MGA_3063	LOCUS_30580	sequence1:3091126..3092127(-)	partial			WP_011730088.1	MCE family protein	59.8	60.4	30.1
MGA_3072	LOCUS_30670	sequence1:3100154..3100999(-)	frameshift		3101112	WP_211285741.1	IS3 family transposase	100.0	73.2	78.6
MGA_3074	LOCUS_30690	sequence1:3101652..3101918(+)	partial			WP_003900767.1	hypothetical protein	96.6	71.4	69.4
MGA_3076	LOCUS_30710	sequence1:3104035..3104535(+)	frameshift		3104376,3104719	WP_003901078.1	IS256-like element IS1081 family transposase	68.7	27.5	72.8
MGA_3077	LOCUS_30720	sequence1:3104453..3104821(+)	frameshift		3104376,3104719	WP_003901078.1	IS256-like element IS1081 family transposase	73.0	21.4	86.5
MGA_3078	LOCUS_30730	sequence1:3104713..3105270(+)	frameshift		3104719	WP_003901078.1	IS256-like element IS1081 family transposase	98.4	45.1	78.1
MGA_3080	LOCUS_30750	sequence1:3106416..3106973(-)	frameshift		3106966	WP_003901078.1	IS256-like element IS1081 family transposase	98.4	45.1	78.1
MGA_3081	LOCUS_30760	sequence1:3106865..3107650(-)	frameshift		3106966	WP_003901078.1	IS256-like element IS1081 family transposase	87.4	54.9	78.5
MGA_3098	LOCUS_30930	sequence1:3128965..3129930(+)	partial			WP_003900793.1	LpqN/LpqT family lipoprotein	60.1	63.2	59.2
MGA_3117	LOCUS_31120	sequence1:3150452..3150754(-)	partial			WP_011731645.1	membrane protein insertion efficiency factor YidD	85.0	73.9	62.4
MGA_3138	LOCUS_31330	sequence1:3172644..3174023(-)	frameshift,internal_stop_codon	3172617..3172619(-),3172548..3172550(-),3172644..3172646(-)	3172520,3172610,3172607	WP_011726619.1	protein phosphatase 2C domain-containing protein	92.6	83.8	69.2
MGA_3142	LOCUS_31370	sequence1:3177602..3177883(-)	partial			WP_011730766.1	metallophosphoesterase family protein	90.3	56.1	30.2
MGA_3144	LOCUS_31390	sequence1:3178588..3179568(-)	partial			WP_011729718.1	NAD(P)/FAD-dependent oxidoreductase	92.9	57.5	45.5
MGA_3145	LOCUS_31400	sequence1:3180148..3180579(+)	partial			WP_012259124.1	GNAT family N-acetyltransferase	72.0	71.1	45.6
MGA_3172	LOCUS_31670	sequence1:3201885..3203186(+)	partial			WP_003899640.1	hypothetical protein	75.1	74.3	43.2
MGA_3179	LOCUS_31740	sequence1:3209346..3210056(+)	partial			WP_011731137.1	PadR family transcriptional regulator	61.0	58.5	70.8
MGA_3192	LOCUS_31870	sequence1:3221647..3221988(-)	partial			WP_003419814.1	hypothetical protein	46.0	43.4	57.1
MGA_3196	LOCUS_31910	sequence1:3226164..3227174(-)	partial			WP_013224379.1	alpha/beta hydrolase	47.0	69.8	42.4
MGA_3218	LOCUS_32130	sequence1:3249569..3251029(+)	partial			WP_003414134.1	AAA family ATPase	65.4	53.0	56.9
MGA_3225	LOCUS_32200	sequence1:3257619..3258959(-)	partial			WP_011727070.1	PPE family protein	48.0	41.1	46.0
MGA_3234	LOCUS_32290	sequence1:3270738..3272840(+)	partial			WP_011730306.1	EspA/EspE family type VII secretion system effector	71.1	64.0	37.1
MGA_3236	LOCUS_32310	sequence1:3273231..3273785(+)	partial			WP_011730307.1	hypothetical protein	93.5	66.7	33.1
MGA_3246	LOCUS_32410	sequence1:3281299..3282795(-)	partial			WP_010950653.1	alpha/beta hydrolase	39.4	30.5	33.8
MGA_3249	LOCUS_32440	sequence1:3283877..3285256(-)	partial			WP_003900845.1	alpha/beta hydrolase family protein	63.6	70.5	54.3
MGA_3250	LOCUS_32450	sequence1:3285369..3286898(-)	partial			WP_011729255.1	serine/threonine-protein kinase	61.9	63.9	63.5
MGA_3265	LOCUS_32600	sequence1:3301507..3302214(-)	partial			WP_003399745.1	TMEM165/GDT1 family protein	77.9	60.9	62.5
MGA_3271	LOCUS_32660	sequence1:3306405..3307334(-)	frameshift,internal_stop_codon	3307250..3307252(-)	3307364,3307533,3307165	WP_235624060.1	LCP family protein	95.1	68.7	63.3
MGA_3278	LOCUS_32730	sequence1:3311429..3312589(-)	partial			WP_003420892.1	septum formation family protein	81.1	69.9	64.6
MGA_3283	LOCUS_32780	sequence1:3316728..3317324(+)	frameshift		3317174	WP_003897817.1	lysophospholipid acyltransferase family protein	74.7	58.5	73.0
MGA_3284	LOCUS_32790	sequence1:3317213..3317467(+)	frameshift		3317174	WP_003897817.1	lysophospholipid acyltransferase family protein	96.4	32.0	56.8
MGA_3288	LOCUS_32830	sequence1:3320897..3321508(-)	frameshift		3320977	WP_003897814.1	hypothetical protein	78.3	53.1	56.6
MGA_3323	LOCUS_33180	sequence1:3372365..3373258(+)	frameshift		3372278	WP_015776578.1	ISL3 family transposase	89.9	63.1	38.5
MGA_3328	LOCUS_33230	sequence1:3375152..3376120(-)	partial			WP_011727856.1	IS256 family transposase	100.0	73.6	87.3
MGA_3330	LOCUS_33250	sequence1:3377633..3377962(-)	partial			WP_011727856.1	IS256 family transposase	95.4	23.7	77.9
MGA_3343	LOCUS_33380	sequence1:3386614..3386880(-)	partial			WP_024318137.1	IS21-like element helper ATPase IstB	76.1	27.0	43.3
MGA_3350	LOCUS_33450	sequence1:3389366..3389659(+)	frameshift		3389624,3389252	WP_211285741.1	IS3 family transposase	85.6	21.6	67.5
MGA_3351	LOCUS_33460	sequence1:3389691..3390209(+)	frameshift		3389623	WP_211285741.1	IS3 family transposase	100.0	44.8	83.7
MGA_3371	LOCUS_33660	sequence1:3411505..3411831(-)	partial			WP_003897753.1	DUF1049 domain-containing protein	80.6	71.9	60.9
MGA_3382	LOCUS_33770	sequence1:3421006..3422739(-)	partial			WP_012289393.1	NAD-binding protein	35.0	49.7	29.4
MGA_3388	LOCUS_33830	sequence1:3428106..3430052(+)	frameshift		3430002,3429851,3429948	WP_011731177.1	DNA polymerase III subunits gamma/tau	65.6	62.4	80.2
MGA_3391	LOCUS_33860	sequence1:3432405..3433184(+)	frameshift		3433148	WP_003408560.1	FAD-dependent oxidoreductase	92.3	51.7	65.3
MGA_3392	LOCUS_33870	sequence1:3433204..3433638(+)	frameshift		3433151	WP_003408560.1	FAD-dependent oxidoreductase	97.9	30.9	55.6
MGA_3403	LOCUS_33980	sequence1:3442649..3443293(+)	partial			WP_053543917.1	IS1249 family transposase	86.9	47.3	38.9
MGA_3404	LOCUS_33990	sequence1:3443359..3443589(+)	frameshift		3443568	WP_003904572.1	IS256-like element IS1081 family transposase	96.1	17.6	65.8
MGA_3405	LOCUS_34000	sequence1:3443676..3444593(+)	frameshift		3443568	WP_003901078.1	IS256-like element IS1081 family transposase	99.7	74.5	80.6
MGA_3406	LOCUS_34010	sequence1:3444639..3445253(+)	partial			WP_053543917.1	IS1249 family transposase	96.6	52.0	27.6
MGA_3418	LOCUS_34130	sequence1:3452734..3454734(-)	partial			WP_010965176.1	FtsK/SpoIIIE domain-containing protein	33.6	52.1	25.8
MGA_3427	LOCUS_34220	sequence1:3463576..3464637(-)	partial			WP_014855724.1	N-6 DNA methylase	70.3	25.2	28.8
MGA_3428	LOCUS_34230	sequence1:3464676..3465194(-)	frameshift		3465360,3465417,3465260	WP_211285741.1	IS3 family transposase	100.0	44.8	83.7
MGA_3430	LOCUS_34250	sequence1:3465812..3466882(-)	partial			WP_048053708.1	N-6 DNA methylase	73.6	21.8	28.1
MGA_3433	LOCUS_34280	sequence1:3468980..3469423(+)	frameshift		3469049,3469340	WP_012296236.1	organomercurial lyase MerB	71.4	48.2	55.2
MGA_3434	LOCUS_34290	sequence1:3469318..3469638(+)	frameshift		3469339	WP_000790334.1	organomercurial lyase MerB	77.4	38.4	47.6
MGA_3437	LOCUS_34320	sequence1:3470488..3471366(+)	partial			WP_005112261.1	cytochrome c biogenesis CcdA family protein	74.3	76.3	30.9
MGA_3439	LOCUS_34340	sequence1:3472618..3473925(-)	frameshift		3472692	WP_189327688.1	IS21 family transposase	93.1	73.1	54.9
MGA_3440	LOCUS_34350	sequence1:3474087..3475214(-)	partial			WP_014855724.1	N-6 DNA methylase	80.5	29.8	30.0
MGA_3474	LOCUS_34690	sequence1:3505100..3505900(+)	partial			WP_003419679.1	type II secretion system F family protein	73.7	73.3	42.3
MGA_3477	LOCUS_34720	sequence1:3506796..3507041(+)	partial			WP_010886180.1	apoptosis inhibitor	100.0	64.8	53.1
MGA_3492	LOCUS_34870	sequence1:3525268..3525699(+)	partial			WP_003402171.1	hypothetical protein	66.4	64.6	40.0
MGA_3508	LOCUS_35030	sequence1:3543502..3544890(+)	partial			WP_003419534.1	membrane protein	44.4	51.4	58.0
MGA_3545	LOCUS_35400	sequence1:3580121..3580507(-)	partial			WP_011730575.1	heme-binding protein	64.1	68.3	37.8
MGA_3559	LOCUS_35540	sequence1:3594019..3594621(-)	partial			WP_005114808.1	PepSY domain-containing protein	67.0	69.8	46.3
MGA_3584	LOCUS_35790	sequence1:3619264..3619635(+)	frameshift		3619620	WP_014878495.1	acetaldehyde dehydrogenase (acetylating)	97.6	39.1	88.3
MGA_3585	LOCUS_35800	sequence1:3619632..3620192(+)	frameshift		3619623	WP_003419251.1	acetaldehyde dehydrogenase (acetylating)	94.6	56.8	83.5
MGA_3595	LOCUS_35900	sequence1:3627910..3628542(-)	partial			WP_005079730.1	TetR/AcrR family transcriptional regulator	64.8	69.0	30.0
MGA_3597	LOCUS_35920	sequence1:3629092..3629967(+)	partial			WP_005076519.1	alpha/beta hydrolase	92.8	74.4	27.5
MGA_3614	LOCUS_36090	sequence1:3647390..3647908(-)	frameshift		3647975	WP_211285741.1	IS3 family transposase	100.0	44.8	83.7
MGA_3615	LOCUS_36100	sequence1:3647940..3648233(-)	frameshift		3648346,3647974	WP_211285741.1	IS3 family transposase	85.6	21.6	67.5
MGA_3617	LOCUS_36120	sequence1:3648529..3649710(-)	partial			WP_144955419.1	ISL3 family transposase	69.2	66.4	36.2
MGA_3631	LOCUS_36260	sequence1:3664340..3665014(+)	partial			WP_014878484.1	hypothetical protein	65.2	62.2	54.1
MGA_3664	LOCUS_36590	sequence1:3697961..3698758(-)	frameshift		3698790	WP_003897334.1	4-hydroxy-2-oxovalerate aldolase	97.7	74.2	88.4
MGA_3665	LOCUS_36600	sequence1:3698779..3698991(-)	frameshift		3698790	WP_005092252.1	4-hydroxy-2-oxovalerate aldolase	92.9	18.6	89.2
MGA_3729	LOCUS_37240	sequence1:3758674..3759339(+)	frameshift,internal_stop_codon	3758579..3758581(+)	3758674	WP_010886087.1	hypothetical protein	92.3	64.3	56.1
MGA_3743	LOCUS_37380	sequence1:3772013..3772216(-)	partial			WP_011730798.1	DUF3073 domain-containing protein	56.7	66.7	86.8
MGA_3786	LOCUS_37810	sequence1:3815905..3816513(-)	frameshift,internal_stop_codon	3816506..3816508(-),3816545..3816547(-)	3816490,3816475	WP_003895335.1	DUF4333 domain-containing protein	54.0	41.0	49.1
MGA_3790	LOCUS_37850	sequence1:3820431..3822341(-)	partial			WP_003410735.1	serine/threonine protein kinase PknJ	45.4	48.9	57.9
MGA_3810	LOCUS_38050	sequence1:3842328..3843776(-)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	25.7	30.5	74.2
MGA_3821	LOCUS_38160	sequence1:3851775..3852014(+)	partial			WP_003404614.1	DUF2537 domain-containing protein	79.7	67.0	65.1
MGA_3849	LOCUS_38440	sequence1:3881390..3882076(+)	frameshift		3881996,3881357	WP_085976166.1	IS3 family transposase	91.7	58.0	39.8
MGA_3850	LOCUS_38450	sequence1:3881983..3882300(+)	frameshift		3881995	WP_003112560.1	IS3 family transposase	54.3	20.4	61.4
MGA_3855	LOCUS_38500	sequence1:3886123..3886587(-)	partial			WP_011727856.1	IS256 family transposase	99.4	35.1	81.8
MGA_3857	LOCUS_38520	sequence1:3888025..3888219(-)	partial			WP_011727856.1	IS256 family transposase	79.7	11.6	84.3
MGA_3858	LOCUS_38530	sequence1:3888356..3888823(-)	partial			WP_011727856.1	IS256 family transposase	99.4	35.3	81.9
MGA_3859	LOCUS_38540	sequence1:3888899..3889828(-)	frameshift		3889860	WP_087902221.1	IS3-like element IS987 family transposase	95.1	69.0	67.7
MGA_3861	LOCUS_38560	sequence1:3890187..3891002(-)	partial			WP_011727856.1	IS256 family transposase	98.5	61.0	83.2
MGA_3873	LOCUS_38680	sequence1:3900751..3901617(-)	partial			WP_005112805.1	hypothetical protein	69.8	71.4	36.3
MGA_3874	LOCUS_38690	sequence1:3901714..3903012(-)	frameshift		3903075,3903053	WP_005112804.1	cytochrome P450	99.1	81.0	53.1
MGA_3877	LOCUS_38720	sequence1:3905108..3905548(-)	partial			WP_003898648.1	poly-gamma-glutamate hydrolase family protein	92.5	38.1	70.4
MGA_3884	LOCUS_38790	sequence1:3914258..3915031(-)	partial			WP_003898656.1	DUF4873 domain-containing protein	60.3	48.0	40.7
MGA_3885	LOCUS_38800	sequence1:3915028..3915945(-)	partial			WP_011730613.1	diiron oxygenase	97.7	72.9	72.5
MGA_3899	LOCUS_38940	sequence1:3927782..3928069(-)	partial			WP_003404838.1	chorismate mutase	73.7	66.7	85.7
MGA_3926	LOCUS_39210	sequence1:3960104..3960538(+)	partial			WP_013230043.1	large-conductance mechanosensitive channel protein MscL	70.8	73.9	43.7
MGA_3928	LOCUS_39230	sequence1:3961316..3961669(-)	partial			WP_010907580.1	zinc ribbon domain-containing protein	54.7	64.6	75.0
MGA_3936	LOCUS_39310	sequence1:3968387..3969559(-)	partial			WP_012256615.1	DNA adenine methylase	71.0	81.4	34.1
MGA_3939	LOCUS_39340	sequence1:3973098..3975872(-)	partial			WP_011403314.1	3'-5' exonuclease	70.2	79.6	28.0
MGA_3949	LOCUS_39440	sequence1:3987275..3988192(-)	frameshift		3988299	WP_003901078.1	IS256-like element IS1081 family transposase	99.7	74.5	80.6
MGA_3950	LOCUS_39450	sequence1:3988279..3988509(-)	frameshift		3988299	WP_003904572.1	IS256-like element IS1081 family transposase	96.1	17.6	65.8
MGA_3956	LOCUS_39510	sequence1:3992266..3993159(+)	frameshift		3992185	WP_015776578.1	ISL3 family transposase	89.9	63.1	38.5
MGA_3957	LOCUS_39520	sequence1:3993223..3993660(+)	frameshift		3993164	WP_011730545.1	DUF5642 family protein	89.7	58.2	38.5
MGA_3994	LOCUS_39890	sequence1:4031231..4032196(+)	frameshift		4031231	WP_144955419.1	ISL3 family transposase	99.4	77.0	36.8
MGA_3997	LOCUS_39920	sequence1:4034457..4036322(-)	partial			WP_003405308.1	sensor histidine kinase KdpD	96.8	70.1	59.4
MGA_4001	LOCUS_39960	sequence1:4038350..4038649(-)	partial			WP_010950346.1	PE family protein	77.8	14.3	48.1
MGA_4011	LOCUS_40060	sequence1:4049872..4050201(-)	partial			WP_011730439.1	lipoprotein LpqV	95.4	67.3	41.9
MGA_4013	LOCUS_40080	sequence1:4050901..4051296(+)	partial			WP_003405651.1	rhodanese-like domain-containing protein	74.0	74.0	77.3
MGA_4023	LOCUS_40180	sequence1:4061591..4062253(+)	partial			WP_011730428.1	RDD family protein	68.6	69.0	52.7
MGA_4026	LOCUS_40210	sequence1:4064243..4064686(-)	partial			WP_003405744.1	DUF4307 domain-containing protein	74.1	75.7	65.1
MGA_4028	LOCUS_40230	sequence1:4065660..4065962(+)	partial			WP_005073999.1	hypothetical protein	69.0	71.9	62.3
MGA_4041	LOCUS_40360	sequence1:4079042..4080073(-)	partial			WP_010950492.1	hypothetical protein	74.9	80.9	43.7
MGA_4051	LOCUS_40460	sequence1:4089224..4090291(-)	partial			WP_014878271.1	hypothetical protein	56.3	52.4	51.7
MGA_4097	LOCUS_40920	sequence1:4134731..4135831(-)	frameshift		4135853	WP_010950642.1	HNH endonuclease signature motif containing protein	96.7	82.1	61.5
MGA_4105	LOCUS_41000	sequence1:4141220..4142824(+)	frameshift		4142656	WP_003898748.1	nitrate reductase subunit alpha	89.7	39.0	83.1
MGA_4106	LOCUS_41010	sequence1:4142821..4144224(+)	frameshift		4142656,4144159	WP_003898748.1	nitrate reductase subunit alpha	95.5	36.3	82.1
MGA_4107	LOCUS_41020	sequence1:4144221..4144949(+)	frameshift		4144680,4144683,4144158	WP_003898748.1	nitrate reductase subunit alpha	63.6	12.4	89.6
MGA_4110	LOCUS_41050	sequence1:4147205..4147648(+)	frameshift		4147630	WP_003406095.1	respiratory nitrate reductase subunit gamma	97.3	58.1	72.0
MGA_4111	LOCUS_41060	sequence1:4147648..4147944(+)	frameshift		4147633	WP_003406095.1	respiratory nitrate reductase subunit gamma	100.0	39.8	69.4
MGA_4112	LOCUS_41070	sequence1:4147949..4148212(-)	frameshift		4148201	WP_005110929.1	molybdate ABC transporter substrate-binding protein	95.4	30.2	60.2
MGA_4113	LOCUS_41080	sequence1:4148714..4149055(-)	frameshift		4149057	WP_003405880.1	decarboxylating 6-phosphogluconate dehydrogenase	97.3	32.4	79.1
MGA_4114	LOCUS_41090	sequence1:4149052..4149741(-)	frameshift		4149057	WP_003405880.1	decarboxylating 6-phosphogluconate dehydrogenase	99.6	67.1	69.4
MGA_4115	LOCUS_41100	sequence1:4149803..4150363(-)	frameshift		4150346,4150380,4150310	WP_003898735.1	glucose-6-phosphate dehydrogenase	90.9	36.5	64.9
MGA_4117	LOCUS_41120	sequence1:4151582..4152322(+)	frameshift		4152164,4152356,4151534	WP_003406099.1	translational GTPase TypA	80.1	30.7	78.3
MGA_4118	LOCUS_41130	sequence1:4152395..4153534(+)	frameshift		4152352,4152163	WP_011730337.1	translational GTPase TypA	78.9	47.2	85.3
MGA_4119	LOCUS_41140	sequence1:4153698..4154138(+)	frameshift		4154290,4154226,4154123,4154190	WP_010920254.1	NAD(P)-dependent alcohol dehydrogenase	97.3	38.8	52.1
MGA_4120	LOCUS_41150	sequence1:4154521..4154787(+)	frameshift		4154322,4154515	WP_011728104.1	NAD(P)-dependent alcohol dehydrogenase	69.3	16.9	55.7
MGA_4121	LOCUS_41160	sequence1:4155018..>4155701(-)	partial			WP_003106595.1	AraC family transcriptional regulator	88.1	59.8	36.8