{ "type": "genome", "identifier": "GCF_010894455.1", "organism": "Myxococcus eversor", "title": "Myxococcus eversor", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Aberystwyth University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_010894455.1", "bioproject": "PRJNA224116", "biosample": "SAMN14091027", "wgs_master": "JAAIXY000000000.1", "refseq_category": "reference genome", "taxid": "2709661", "species_taxid": "2709661", "organism_name": "Myxococcus eversor", "infraspecific_name": "strain=AB053B", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/21", "asm_name": "ASM1089445v1", "asm_submitter": "Aberystwyth University", "gbrs_paired_asm": "GCA_010894455.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/010/894/455/GCF_010894455.1_ASM1089445v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "11394166", "genome_size_ungapped": "11393246", "gc_percent": "69.000000", "replicon_count": "0", "scaffold_count": "124", "contig_count": "124", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_010894455.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "9105", "protein_coding_gene_count": "8965", "non_coding_gene_count": "85", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-21", "dateModified": "2020-02-21", "datePublished": "2020-02-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Myxococcus eversor" ], "sample_taxid": [ "2709661" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "United Kingdom: Wales, Aberystwyth" ], "sample_host_location_id": [], "data_size": "3.091 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 8.33, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "11394166", "Number of Sequences": "124", "Longest Sequences (bp)": "855010", "N50 (bp)": "405325", "Gap Ratio (%)": "0.008074", "GCcontent (%)": "68.9", "Number of CDSs": "9121", "Average Protein Length": "370.2", "Coding Ratio (%)": "88.9", "Number of rRNAs": "3", "Number of tRNAs": "89", "Number of CRISPRs": "6" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Myxococcus eversor", "strain": "strain=AB053B", "accession": "GCA_010894455.1", "taxid": 2709661, "species_taxid": 2709661, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 3751, "total_fragments": 3754, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis", "strain": "strain=AM401", "accession": "GCA_006636215.1", "taxid": 2590453, "species_taxid": 2590453, "relation_to_type": "type", "validated": true, "ani": 91.5244, "matched_fragments": 2970, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myxococcus fulvus", "strain": "strain=NBRC 100333", "accession": "GCA_007991095.1", "taxid": 33, "species_taxid": 33, "relation_to_type": "type", "validated": true, "ani": 87.0259, "matched_fragments": 2821, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myxococcus fulvus", "strain": "strain=DSM 16525", "accession": "GCA_900111765.1", "taxid": 33, "species_taxid": 33, "relation_to_type": "type", "validated": true, "ani": 87.0231, "matched_fragments": 2854, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myxococcus stipitatus", "strain": "strain=DSM 14675", "accession": "GCA_000331735.1", "taxid": 83455, "species_taxid": 83455, "relation_to_type": "neotype", "validated": true, "ani": 86.2112, "matched_fragments": 2568, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyxidicoccus trucidator", "strain": "strain=CA060A", "accession": "GCA_010894435.1", "taxid": 2709662, "species_taxid": 2709662, "relation_to_type": "type", "validated": true, "ani": 83.9894, "matched_fragments": 2461, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyxidicoccus caerfyrddinensis", "strain": "strain=CA032A", "accession": "GCA_010894405.1", "taxid": 2709663, "species_taxid": 2709663, "relation_to_type": "type", "validated": true, "ani": 83.9681, "matched_fragments": 2463, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyxidicoccus fallax", "strain": "strain=DSM 14698", "accession": "GCA_012933655.1", "taxid": 394095, "species_taxid": 394095, "relation_to_type": "type", "validated": true, "ani": 83.6275, "matched_fragments": 2256, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corallococcus silvisoli", "strain": "strain=c25j21", "accession": "GCA_009909145.1", "taxid": 2697031, "species_taxid": 2697031, "relation_to_type": "type", "validated": true, "ani": 81.9009, "matched_fragments": 1881, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corallococcus soli", "strain": "strain=ZKHCc1 1396", "accession": "GCA_014930455.1", "taxid": 2710757, "species_taxid": 2710757, "relation_to_type": "type", "validated": true, "ani": 81.8755, "matched_fragments": 1901, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Megalodesulfovibrio gigas", "strain": "strain=ATCC 19364", "accession": "GCA_000468495.1", "taxid": 879, "species_taxid": 879, "relation_to_type": "type", "validated": true, "ani": 75.0533, "matched_fragments": 87, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Megalodesulfovibrio gigas", "strain": "strain=DSM 1382", "accession": "GCA_000429285.1", "taxid": 879, "species_taxid": 879, "relation_to_type": "type", "validated": true, "ani": 75.0189, "matched_fragments": 83, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas segetis", "strain": "strain=YJ09", "accession": "GCA_009720245.1", "taxid": 1104779, "species_taxid": 1104779, "relation_to_type": "type", "validated": true, "ani": 74.9651, "matched_fragments": 57, "total_fragments": 3754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinosynnema mirum", "strain": "strain=DSM 43827", "accession": "GCA_000023245.1", "taxid": 40567, "species_taxid": 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