{ "type": "genome", "identifier": "GCF_011044975.1", "organism": "Streptomyces coryli", "title": "Streptomyces coryli", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Ondokuz Mayis University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_011044975.1", "bioproject": "PRJNA224116", "biosample": "SAMN14142396", "wgs_master": "JAAKZV000000000.1", "refseq_category": "reference genome", "taxid": "1128680", "species_taxid": "1128680", "organism_name": "Streptomyces coryli", "infraspecific_name": "strain=A7024", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/03/01", "asm_name": "ASM1104497v1", "asm_submitter": "Ondokuz Mayis University", "gbrs_paired_asm": "GCA_011044975.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/044/975/GCF_011044975.1_ASM1104497v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9031846", "genome_size_ungapped": "9031846", "gc_percent": "71.500000", "replicon_count": "0", "scaffold_count": "613", "contig_count": "613", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_011044975.1-RS_2024_03_29", "annotation_date": "2024-03-29", "total_gene_count": "8498", "protein_coding_gene_count": "8142", "non_coding_gene_count": "75", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-03-01", "dateModified": "2020-03-01", "datePublished": "2020-03-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces coryli" ], "sample_taxid": [ "1128680" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Turkey: Duzce" ], "sample_host_location_id": [], "data_size": "2.453 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 3.12, "strain_heterogeneity": 66.67, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "9031846", "Number of Sequences": "613", "Longest Sequences (bp)": "162896", "N50 (bp)": "28409", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "71.5", "Number of CDSs": "7894", "Average Protein Length": "327.0", "Coding Ratio (%)": "85.7", "Number of rRNAs": "3", "Number of tRNAs": "79", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptomyces coryli", "strain": "strain=A7024", "accession": "GCA_011044975.1", "taxid": 1128680, "species_taxid": 1128680, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2698, "total_fragments": 2721, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptomyces pathocidini", "strain": "strain=NRRL B-24287", "accession": "GCA_001418495.1", "taxid": 1650571, "species_taxid": 1650571, "relation_to_type": "type", "validated": true, "ani": 80.96, "matched_fragments": 839, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces smaragdinus", "strain": "strain=RB5", "accession": "GCA_009604385.1", "taxid": 2585196, "species_taxid": 2585196, "relation_to_type": "type", "validated": true, "ani": 80.8539, "matched_fragments": 1190, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces chryseus", "strain": "strain=DSM 40420", "accession": "GCA_005981935.1", "taxid": 68186, "species_taxid": 68186, "relation_to_type": "type", "validated": true, "ani": 80.586, "matched_fragments": 885, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces albidochromogenes", "strain": "strain=DSM 41800", "accession": "GCA_005981925.1", "taxid": 329524, "species_taxid": 329524, "relation_to_type": "type", "validated": true, "ani": 80.3513, "matched_fragments": 1005, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces mesophilus", "strain": "strain=YC504", "accession": "GCA_011044995.1", "taxid": 1775132, "species_taxid": 1775132, "relation_to_type": "type", "validated": true, "ani": 80.3232, "matched_fragments": 1233, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces chryseus", "strain": "strain=JCM 4737", "accession": "GCA_014650755.1", "taxid": 68186, "species_taxid": 68186, "relation_to_type": "type", "validated": true, "ani": 80.1757, "matched_fragments": 1102, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces sennicomposti", "strain": "strain=RCPT1-4", "accession": "GCA_019890635.1", "taxid": 2873384, "species_taxid": 2873384, "relation_to_type": "type", "validated": true, "ani": 80.1194, "matched_fragments": 1095, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces benahoarensis", "strain": "strain=MZ03-37", "accession": "GCA_007280575.1", "taxid": 2595054, "species_taxid": 2595054, "relation_to_type": "type", "validated": true, "ani": 80.055, "matched_fragments": 914, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces barkulensis", "strain": "strain=RC 1831", "accession": "GCA_002843305.1", "taxid": 1257026, "species_taxid": 1257026, "relation_to_type": "type", "validated": true, "ani": 80.0199, "matched_fragments": 963, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces curacoi", "strain": "strain=DSM 40107", "accession": "GCA_001513975.1", "taxid": 146536, "species_taxid": 146536, "relation_to_type": "type", "validated": true, "ani": 80.011, "matched_fragments": 1223, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces minutiscleroticus", "strain": "strain=JCM 4790", "accession": "GCA_014650875.1", "taxid": 68238, "species_taxid": 68238, "relation_to_type": "type", "validated": true, "ani": 79.9794, "matched_fragments": 1244, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces palmae", "strain": "strain=JCM 31289", "accession": "GCA_004684805.1", "taxid": 1701085, "species_taxid": 1701085, "relation_to_type": "type", "validated": true, "ani": 79.9652, "matched_fragments": 939, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces longwoodensis", "strain": "strain=DSM 41677", "accession": "GCA_001514125.1", "taxid": 68231, "species_taxid": 68231, "relation_to_type": "type", "validated": true, "ani": 79.9462, "matched_fragments": 1194, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces barkulensis", "strain": "strain=RC 1831", "accession": "GCA_002811705.2", "taxid": 1257026, "species_taxid": 1257026, "relation_to_type": "type", "validated": true, "ani": 79.8898, "matched_fragments": 973, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces galbus", "strain": "strain=DSM 40089", "accession": "GCA_005280195.1", "taxid": 33898, "species_taxid": 33898, "relation_to_type": "type", "validated": true, "ani": 79.8535, "matched_fragments": 1174, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces albireticuli", "strain": "strain=NRRL B1670", "accession": "GCA_021228125.1", "taxid": 1940, "species_taxid": 1940, "relation_to_type": "type", "validated": true, "ani": 79.8238, "matched_fragments": 1090, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces spectabilis", "strain": "strain=ATCC 27465", "accession": "GCA_008704795.1", "taxid": 68270, "species_taxid": 68270, "relation_to_type": "type", "validated": true, "ani": 79.8219, "matched_fragments": 1304, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces rubradiris", "strain": "strain=NBRC 14000", "accession": "GCA_016860525.1", "taxid": 285531, "species_taxid": 285531, "relation_to_type": "type", "validated": true, "ani": 79.7813, "matched_fragments": 1201, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces spectabilis", "strain": "strain=KCTC9218", "accession": "GCA_022698305.1", "taxid": 68270, "species_taxid": 68270, "relation_to_type": "type", "validated": true, "ani": 79.7506, "matched_fragments": 1323, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces spectabilis", "strain": "strain=JCM 4308", "accession": "GCA_014649235.1", "taxid": 68270, "species_taxid": 68270, "relation_to_type": "type", "validated": true, "ani": 79.747, "matched_fragments": 1313, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces galbus", "strain": "strain=JCM 4639", "accession": "GCA_014650535.1", "taxid": 33898, "species_taxid": 33898, "relation_to_type": "type", "validated": true, "ani": 79.7462, "matched_fragments": 1185, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces alkaliterrae", "strain": "strain=OF1", "accession": "GCA_007097205.2", "taxid": 2213162, "species_taxid": 2213162, "relation_to_type": "type", "validated": true, "ani": 79.7144, "matched_fragments": 810, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces justiciae", "strain": "strain=3R004", "accession": "GCA_015163075.1", "taxid": 2780140, "species_taxid": 2780140, "relation_to_type": "type", "validated": true, "ani": 79.6826, "matched_fragments": 1271, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces buecherae", "strain": "strain=AC541", "accession": "GCA_014295035.1", "taxid": 2763006, "species_taxid": 2763006, "relation_to_type": "type", "validated": true, "ani": 79.6722, "matched_fragments": 1134, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces yatensis", "strain": "strain=DSM 41771", "accession": "GCA_018069625.1", "taxid": 155177, "species_taxid": 155177, "relation_to_type": "type", "validated": true, "ani": 79.6417, "matched_fragments": 1276, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinacidiphila glaucinigra", "strain": "strain=CGMCC 4.1858", "accession": "GCA_900188405.1", "taxid": 235986, "species_taxid": 235986, "relation_to_type": "type", "validated": true, "ani": 79.5205, "matched_fragments": 1171, "total_fragments": 2721, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 3.12, "strain_heterogeneity": 66.67 }, "gtdb_result": [ { "accession": "GCF_011044975.1", "gtdb_species": "s__Streptomyces sp011044975", "ani": 100.0, "matched_fragments": 2698, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_000514715.1", "gtdb_species": "s__Streptomyces sp000514715", "ani": 80.9824, "matched_fragments": 1367, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002797655.1", "gtdb_species": "s__Streptomyces sp002797655", "ani": 80.8872, "matched_fragments": 1415, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.99", "min_intra_species_ani": "97.30", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_009604385.1", "gtdb_species": "s__Streptomyces sp009604385", "ani": 80.8595, "matched_fragments": 1192, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002847285.1", "gtdb_species": "s__Streptomyces sp002847285", "ani": 80.7224, "matched_fragments": 1371, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.16", "min_intra_species_ani": "95.03", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000482585.1", "gtdb_species": "s__Streptomyces sp000482585", "ani": 80.6413, "matched_fragments": 1276, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005981925.1", "gtdb_species": "s__Streptomyces albidochromogenes", "ani": 80.3717, "matched_fragments": 1001, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.5104, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003945545.1", "gtdb_species": "s__Streptomyces sp003945545", "ani": 80.2246, "matched_fragments": 1203, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007280575.1", "gtdb_species": "s__Streptomyces sp007280575", "ani": 80.092, "matched_fragments": 908, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001746415.1", "gtdb_species": "s__Streptomyces agglomeratus", "ani": 80.0441, "matched_fragments": 1114, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.50", "min_intra_species_ani": "99.39", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.91", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_001513975.1", "gtdb_species": "s__Streptomyces curacoi", "ani": 80.03, "matched_fragments": 1219, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.35", "min_intra_species_ani": "97.22", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.84", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_002843305.1", "gtdb_species": "s__Streptomyces barkulensis", "ani": 79.9874, "matched_fragments": 970, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 96.765, "mean_intra_species_ani": "99.92", "min_intra_species_ani": "99.92", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_007595705.1", "gtdb_species": "s__Streptomyces sp007595705", "ani": 79.9822, "matched_fragments": 1110, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014650875.1", "gtdb_species": "s__Streptomyces minutiscleroticus", "ani": 79.9804, "matched_fragments": 1245, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.56", "min_intra_species_ani": "98.56", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001514125.1", "gtdb_species": "s__Streptomyces longwoodensis", "ani": 79.9676, "matched_fragments": 1188, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.95", "min_intra_species_ani": "95.95", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004684805.1", "gtdb_species": "s__Streptomyces palmae", "ani": 79.8889, "matched_fragments": 952, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011045025.1", "gtdb_species": "s__Streptomyces ureilyticus", "ani": 79.8658, "matched_fragments": 1136, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008704795.1", "gtdb_species": "s__Streptomyces spectabilis", "ani": 79.8481, "matched_fragments": 1298, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.73", "min_intra_species_ani": "96.21", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.90", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_005280195.1", "gtdb_species": "s__Streptomyces galbus", "ani": 79.8137, "matched_fragments": 1181, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.26", "min_intra_species_ani": "98.53", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_007097205.2", "gtdb_species": "s__Streptomyces alkaliterrae", "ani": 79.7453, "matched_fragments": 805, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.63", "min_intra_species_ani": "99.32", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.86", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_014649375.1", "gtdb_species": "s__Streptomyces aurantiogriseus", "ani": 79.7288, "matched_fragments": 1247, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005222485.1", "gtdb_species": "s__Streptomyces griseoviridis_A", "ani": 79.701, "matched_fragments": 1205, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014295035.1", "gtdb_species": "s__Streptomyces buecherae", "ani": 79.621, "matched_fragments": 1144, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.71", "min_intra_species_ani": "96.93", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.94", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_900188405.1", "gtdb_species": "s__Streptomyces glauciniger", "ani": 79.5086, "matched_fragments": 1174, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.09", "min_intra_species_ani": "95.09", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_018114805.1", "gtdb_species": "s__Streptomyces philanthi", "ani": 79.413, "matched_fragments": 1001, "total_fragments": 2721, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.201, "cell_length": -0.05, "doubling_h": 0.103, "growth_tmp": 27.757, "optimum_tmp": 29.036, "optimum_ph": 7.341, "genome_size": 8292419.302, "gc_content": 71.543, "coding_genes": 7141.289, "rRNA16S_genes": 6.155, "tRNA_genes": 67.804, "gram_stain": 0.998, "sporulation": 0.958, "motility": 0.049, "range_salinity": 0.666, "facultative_respiration": 0.0, "anaerobic_respiration": 0.005, "aerobic_respiration": 0.994, "mesophilic_range_tmp": 0.98, "thermophilic_range_tmp": 0.019, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.208, "coccus_cell_shape": 0.032, "filament_cell_shape": 0.582, "coccobacillus_cell_shape": 0.098, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.076 }, "_genome_taxon": [ "Streptomyces", "coryli" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }